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The map label for this gene is glcD [H]

Identifier: 213158905

GI number: 213158905

Start: 3712123

End: 3713532

Strand: Reverse

Name: glcD [H]

Synonym: AB57_3606

Alternate gene names: 213158905

Gene position: 3713532-3712123 (Counterclockwise)

Preceding gene: 213158909

Following gene: 213158904

Centisome position: 91.68

GC content: 39.93

Gene sequence:

>1410_bases
ATGAATGCTCCAGTCGCTTTAACACCTGAGTTACTCACCCAATTAACAGCAATCGTCGGTGAAAACCGTATTAAAACCGA
TGCTGATAGTCTCGAAAACTGGGGTAAAGATCATACCAAGCATTTTAATCCGAACCCATCGGTCATCGTTTTTCCATCAA
CGACTGAACAAGTTCAGGAAGTTGTGAAGCTTGCAAACCAGTTTAATATTGCAATTACACCGTCAGGTGGTCGTACTGGA
CTCTCTGCTGGTGCTGTAGCAACCAATGGTGAAATTGTCATTAGCATGGACAAAATGAACCAGATTCTTGAGTTCTTCCC
GGCAGACCGTATGGTTCGTGTACAAGCTGGTGTTGTGACTGAGCAATTGCAAAATTATGCAGAAGAGCAGGGTATGTATT
ATCCGGTTGACTTTGCGTCAGCGGGTTCTAGTCAGATTGGCGGTAATATCGGTACCAACGCTGGTGGTATTAAAGTCATT
AAATATGGCATGACGCGTAACTGGGTACTCGGTTTAACTGTAGTGACGGGTAAGGGCGACATTTTACGTTTAAACAAAGG
CATGATTAAAAATGCAACTGGATATGCATTACAGCATTTGTTTATTGGTGGTGAAGGTACATTAGGTTTAGTGACTGAAG
CAGAAATTAAACTTGAGCGTCAACCACAAAACCTACAAGTTTTAGTTTTAGGTGTTCCTGATTTTGATGCAGTAATGCCT
GTGTTACATGCTTTCCAAAAAGATATCGACTTAACTGCATTTGAGTTCTTTGGTGAGCTTGCAATGCAAAAAGTACTCGA
CCGTGGTCATGTTCAACGTCCATTTGAAACTCAATGTCCATTCTATGTATTGCTTGAGTTTGAAGCGCCATACGAACCGA
TTATCGACAAAGCAATGGAGATTTTCGAACACTGTATGGAACAAGGTTGGGTACTTGATGGTGTAATGAGCCAGAGCCTT
GATCAAGTAGAGAGCTTGTGGCGTTTACGCGAAGATATTTCTGAATCAATCGCGCCGTTTATTCCATATAAAAACGATAT
TTCAGTATTAATTACTCACGTACCTGCATTTATTCGTGAAATTGATGCAATTGTTCAAGAAAACTATCCTGACTTTGAAA
TTTGCTGGTTCGGCCATATCGGCGACGGTAACTTACACTTAAATATTTTAAAACCTGAAAACTTAACCAAAGATGAGTTC
TTTGCGAAGTGTCAGGTTGTGAATAAATATGTGTTTGATACCGTTAAAAAATACGATGGTTCAATCTCTGCCGAGCATGG
CGTAGGTATGACGAAAAAGCCATATTTGGAATATTCACGCTCAGCTGAAGAAATCGAATATATGAAAGCTTTGAAAAAAG
TATTTGACCCGAAAGGTATTATGAATCCGGGTAAATTATTCGATCTTTAA

Upstream 100 bases:

>100_bases
AAATGTTCAAATGAACATTATGACTTTGCTCAGGTGAAAACCTTGAGAAATATGAGGTCATAGTCCCACCACAGTTTACT
TCTTGCTAGGTCTGCAAACG

Downstream 100 bases:

>100_bases
ATTAGATCTATTTTGTAGAACTACATAGTTTCTACAGAGTAACCGACAAAGGCATAGCATCATAAAGCTATGCCTTTTGT
TTTTTGGTGATGAAAATGCA

Product: FAD linked oxidase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MNAPVALTPELLTQLTAIVGENRIKTDADSLENWGKDHTKHFNPNPSVIVFPSTTEQVQEVVKLANQFNIAITPSGGRTG
LSAGAVATNGEIVISMDKMNQILEFFPADRMVRVQAGVVTEQLQNYAEEQGMYYPVDFASAGSSQIGGNIGTNAGGIKVI
KYGMTRNWVLGLTVVTGKGDILRLNKGMIKNATGYALQHLFIGGEGTLGLVTEAEIKLERQPQNLQVLVLGVPDFDAVMP
VLHAFQKDIDLTAFEFFGELAMQKVLDRGHVQRPFETQCPFYVLLEFEAPYEPIIDKAMEIFEHCMEQGWVLDGVMSQSL
DQVESLWRLREDISESIAPFIPYKNDISVLITHVPAFIREIDAIVQENYPDFEICWFGHIGDGNLHLNILKPENLTKDEF
FAKCQVVNKYVFDTVKKYDGSISAEHGVGMTKKPYLEYSRSAEEIEYMKALKKVFDPKGIMNPGKLFDL

Sequences:

>Translated_469_residues
MNAPVALTPELLTQLTAIVGENRIKTDADSLENWGKDHTKHFNPNPSVIVFPSTTEQVQEVVKLANQFNIAITPSGGRTG
LSAGAVATNGEIVISMDKMNQILEFFPADRMVRVQAGVVTEQLQNYAEEQGMYYPVDFASAGSSQIGGNIGTNAGGIKVI
KYGMTRNWVLGLTVVTGKGDILRLNKGMIKNATGYALQHLFIGGEGTLGLVTEAEIKLERQPQNLQVLVLGVPDFDAVMP
VLHAFQKDIDLTAFEFFGELAMQKVLDRGHVQRPFETQCPFYVLLEFEAPYEPIIDKAMEIFEHCMEQGWVLDGVMSQSL
DQVESLWRLREDISESIAPFIPYKNDISVLITHVPAFIREIDAIVQENYPDFEICWFGHIGDGNLHLNILKPENLTKDEF
FAKCQVVNKYVFDTVKKYDGSISAEHGVGMTKKPYLEYSRSAEEIEYMKALKKVFDPKGIMNPGKLFDL
>Mature_469_residues
MNAPVALTPELLTQLTAIVGENRIKTDADSLENWGKDHTKHFNPNPSVIVFPSTTEQVQEVVKLANQFNIAITPSGGRTG
LSAGAVATNGEIVISMDKMNQILEFFPADRMVRVQAGVVTEQLQNYAEEQGMYYPVDFASAGSSQIGGNIGTNAGGIKVI
KYGMTRNWVLGLTVVTGKGDILRLNKGMIKNATGYALQHLFIGGEGTLGLVTEAEIKLERQPQNLQVLVLGVPDFDAVMP
VLHAFQKDIDLTAFEFFGELAMQKVLDRGHVQRPFETQCPFYVLLEFEAPYEPIIDKAMEIFEHCMEQGWVLDGVMSQSL
DQVESLWRLREDISESIAPFIPYKNDISVLITHVPAFIREIDAIVQENYPDFEICWFGHIGDGNLHLNILKPENLTKDEF
FAKCQVVNKYVFDTVKKYDGSISAEHGVGMTKKPYLEYSRSAEEIEYMKALKKVFDPKGIMNPGKLFDL

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=448, Percent_Identity=34.375, Blast_Score=269, Evalue=5e-72,
Organism=Homo sapiens, GI37595756, Length=471, Percent_Identity=27.8131634819533, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI37595754, Length=494, Percent_Identity=26.9230769230769, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI4501993, Length=210, Percent_Identity=30.4761904761905, Blast_Score=99, Evalue=1e-20,
Organism=Escherichia coli, GI1789351, Length=435, Percent_Identity=27.3563218390805, Blast_Score=166, Evalue=4e-42,
Organism=Escherichia coli, GI1787977, Length=511, Percent_Identity=26.2230919765166, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI48994907, Length=504, Percent_Identity=23.8095238095238, Blast_Score=94, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17534361, Length=456, Percent_Identity=31.5789473684211, Blast_Score=239, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI71992373, Length=465, Percent_Identity=27.741935483871, Blast_Score=175, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI71992381, Length=465, Percent_Identity=26.6666666666667, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI71992392, Length=391, Percent_Identity=26.5984654731458, Blast_Score=128, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI17556096, Length=224, Percent_Identity=27.6785714285714, Blast_Score=83, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6320023, Length=475, Percent_Identity=34.5263157894737, Blast_Score=273, Evalue=6e-74,
Organism=Saccharomyces cerevisiae, GI6320764, Length=482, Percent_Identity=30.9128630705394, Blast_Score=238, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6320027, Length=447, Percent_Identity=28.6353467561521, Blast_Score=169, Evalue=1e-42,
Organism=Drosophila melanogaster, GI18921117, Length=468, Percent_Identity=31.6239316239316, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24639277, Length=468, Percent_Identity=31.6239316239316, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24639275, Length=468, Percent_Identity=31.6239316239316, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24653753, Length=199, Percent_Identity=27.6381909547739, Blast_Score=87, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 52308; Mature: 52308

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPVALTPELLTQLTAIVGENRIKTDADSLENWGKDHTKHFNPNPSVIVFPSTTEQVQE
CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHH
VVKLANQFNIAITPSGGRTGLSAGAVATNGEIVISMDKMNQILEFFPADRMVRVQAGVVT
HHHHHHHCEEEEECCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHCCCCCEEEEHHHHHH
EQLQNYAEEQGMYYPVDFASAGSSQIGGNIGTNAGGIKVIKYGMTRNWVLGLTVVTGKGD
HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCC
ILRLNKGMIKNATGYALQHLFIGGEGTLGLVTEAEIKLERQPQNLQVLVLGVPDFDAVMP
EEEECCCCCCCCCHHEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEECCCHHHHHH
VLHAFQKDIDLTAFEFFGELAMQKVLDRGHVQRPFETQCPFYVLLEFEAPYEPIIDKAME
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHH
IFEHCMEQGWVLDGVMSQSLDQVESLWRLREDISESIAPFIPYKNDISVLITHVPAFIRE
HHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
IDAIVQENYPDFEICWFGHIGDGNLHLNILKPENLTKDEFFAKCQVVNKYVFDTVKKYDG
HHHHHHCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SISAEHGVGMTKKPYLEYSRSAEEIEYMKALKKVFDPKGIMNPGKLFDL
CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNAPVALTPELLTQLTAIVGENRIKTDADSLENWGKDHTKHFNPNPSVIVFPSTTEQVQE
CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHH
VVKLANQFNIAITPSGGRTGLSAGAVATNGEIVISMDKMNQILEFFPADRMVRVQAGVVT
HHHHHHHCEEEEECCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHCCCCCEEEEHHHHHH
EQLQNYAEEQGMYYPVDFASAGSSQIGGNIGTNAGGIKVIKYGMTRNWVLGLTVVTGKGD
HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCC
ILRLNKGMIKNATGYALQHLFIGGEGTLGLVTEAEIKLERQPQNLQVLVLGVPDFDAVMP
EEEECCCCCCCCCHHEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEECCCHHHHHH
VLHAFQKDIDLTAFEFFGELAMQKVLDRGHVQRPFETQCPFYVLLEFEAPYEPIIDKAME
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHH
IFEHCMEQGWVLDGVMSQSLDQVESLWRLREDISESIAPFIPYKNDISVLITHVPAFIRE
HHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
IDAIVQENYPDFEICWFGHIGDGNLHLNILKPENLTKDEFFAKCQVVNKYVFDTVKKYDG
HHHHHHCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SISAEHGVGMTKKPYLEYSRSAEEIEYMKALKKVFDPKGIMNPGKLFDL
CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]