| Definition | Acinetobacter baumannii AB0057, complete genome. |
|---|---|
| Accession | NC_011586 |
| Length | 4,050,513 |
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The map label for this gene is yccS [H]
Identifier: 213158899
GI number: 213158899
Start: 3706320
End: 3708470
Strand: Direct
Name: yccS [H]
Synonym: AB57_3599
Alternate gene names: 213158899
Gene position: 3706320-3708470 (Clockwise)
Preceding gene: 213158898
Following gene: 213158902
Centisome position: 91.5
GC content: 35.84
Gene sequence:
>2151_bases GTGAATAACCTGACTCAACTATTCAATCGTTTTAAAACGAATTCAATTTTAATTTATTGCCTGCAAATTTTAATTGTACT CACAGGCACAACTTTAGGTTTACTTTGGTTAGGTCATAATGAGCTGATCGTTCCTGTGACTTTAGGTGCGATTGCTGCTG CACTTACTGATTTTGATGATCGCTTAAGTCTTCGTTTACGCAACCTGCTCTATGTCTGCCTACTCTTTTTTACTGTCAGC ACTATTCTTGGTTTTTTAGCACCTTATAAATTTTTATTTATTTTATATCTTTCAATTTCCAGTGCTTGTTTCATTTTATT GGGAGCTTTAGGGCAACGCTACGCTACCATTTCTTTTGGTACGATTTTACTCTCAATTTATAGCATGTTTGGTTTAGGAG AATATGCACACTGGTACCAACAGCCTACTTATTTTGTCTATGGTGCGTTGTGGTACGGCCTAACTTCTATTTTATTTTTT ATTCTTAAACCAACACTTCCTTTACAAGATAAACTTTCACAAATTTTTGAAGAAATTTCAGCCTTACTTCAAGCTAAAGC ACGGTTGTTCGACCCAGATAATAAAGAAAATGTTGAACAGCTTTTATTTGAGTTATCACTACAAAATACACAAGTTGCGC AAAGTCTTAACCAAATACGCAGCTCTCTGCTAACTCGCCTTAAGGCATCACGAGTCAGTAATAAAAGTATTTACTGGTTA AACCTATACTTTTTTGCGCGAGATATACACGAGCAGGCAACTTCTAATTATTTACACTACGAGCATATCCAACAAAATTT TAGCCGTAGTGATCTCATTTTTCGTTTTCAGAAAAACCTACGCTTACAGGCACAAGCTTGCCATGATTTAGCCCAATGCA TTTTGCATAATCAACAATATCAGTCTTCTCAAGAAAGCCAAATTGGCCTAAACCATTTGGAAAGCTCTTTGAAAGACTGG ATACAACAGCATCCACAAAATTTTGAAGTTAAAAATTTAAAGCTGATTTTTAATAATTTAAAAGGAATGCATGAACAATT TGAACAGCTTCAATATGCTCAACCGCTTAATGAAACGCTAAGTCAGAACAAGCAAGAACATCTCAATTTACTAGATGATG ATATTCAAGGATTTTCAGATCTTGTTTTAAAAATTCGGCAGCAACTGACGCCACAATCAGCCCTATTTAGACATGCAGTA CGAATTGCGGTTGTATTTGCCGCAGGTTATGCCATTTCCCTCTTACCTTTTGCCCAACATGGTTACTGGATTTTGCTCAC TAGTTTATTTGTTTGCCAAATTACTTACTTTGCAACCAAAAGTCGTTTAAAGCTTAGAACGATTGGGACTTTACTCGGCG TTTTATTGGGTATTCCCATTTTATATTTTGTTCCTAGTATCGAAGGCCAACTCATTCTTACCATAATTTGTGGAGTTAGC TTTTTCTACTTACGCCAGAAAAAATATGCGCTGGCAACACTGATGGCAACCTTAATGGTATTGCTCATTTTCAACTTAAA AGGTGCAGGTTACAGCATTATTTTACCTCGCCTAATCGACACCTTATTAGGCTGCTTTATTGCTTGGCTTGCTGTTAATT TTATTTGGCCAGACTGGAACTTCCGTAATATTCCAAACAATATTAAGAAAAGTAGCCAAGCCACCTTTGATTACTTCAAT ATGATTGTCGAGCAATATCAGCATGGGAAAAATCAAGACATTGAATATCGTCGAATTCGCCGAGCTGCACATAACGCACA AATTGAATTGTCGAATATGATTTCAAGCTTAAGTGCCGAGCCCAACCCAAATCCAGAGCTGATTCATTACGCCTTTCGTT ATTTGGTTTATAGCCACAGCCAGTTGAGTTATGTCGCAGCATTAGGCAGCCAAAGACAAAAAATTGATGATCAACAGGTA TTACAACTTTTACTGGATTGTCAGCAAATTCTTAAACAAAGTTTATTTGAACAAGCTTCGGTTAACTTTAGTTTTCTTGA ACAGACTTTAAAGCAAATTCAAAGTTTAATAACTCACGAACATTTTTCAGAGAACTACACACTTGTCTTAAAACAAATGA GTTTATTATTAGAAACCTTGCCTGAACTCATAAGCTTAAAAGGCAAACTTTTAGAGCATGAAATTAAATAG
Upstream 100 bases:
>100_bases TAAAAAATAAACTGACTTTTTTAAACAAAACGCATAATATTTTCAAGTAATAAAAATTTAAATACCAATTGTCACGTACC CTCTCATTTAGAAAAAAGCC
Downstream 100 bases:
>100_bases AATAAAAAAATACCGGAATATAAATTCCGGTATTTTTTTAATGTAAGTCTTGTGCAACTCTTTCCTGCATTTCTCGTTTT AAAGCTAAACGTGGTTGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 716; Mature: 716
Protein sequence:
>716_residues MNNLTQLFNRFKTNSILIYCLQILIVLTGTTLGLLWLGHNELIVPVTLGAIAAALTDFDDRLSLRLRNLLYVCLLFFTVS TILGFLAPYKFLFILYLSISSACFILLGALGQRYATISFGTILLSIYSMFGLGEYAHWYQQPTYFVYGALWYGLTSILFF ILKPTLPLQDKLSQIFEEISALLQAKARLFDPDNKENVEQLLFELSLQNTQVAQSLNQIRSSLLTRLKASRVSNKSIYWL NLYFFARDIHEQATSNYLHYEHIQQNFSRSDLIFRFQKNLRLQAQACHDLAQCILHNQQYQSSQESQIGLNHLESSLKDW IQQHPQNFEVKNLKLIFNNLKGMHEQFEQLQYAQPLNETLSQNKQEHLNLLDDDIQGFSDLVLKIRQQLTPQSALFRHAV RIAVVFAAGYAISLLPFAQHGYWILLTSLFVCQITYFATKSRLKLRTIGTLLGVLLGIPILYFVPSIEGQLILTIICGVS FFYLRQKKYALATLMATLMVLLIFNLKGAGYSIILPRLIDTLLGCFIAWLAVNFIWPDWNFRNIPNNIKKSSQATFDYFN MIVEQYQHGKNQDIEYRRIRRAAHNAQIELSNMISSLSAEPNPNPELIHYAFRYLVYSHSQLSYVAALGSQRQKIDDQQV LQLLLDCQQILKQSLFEQASVNFSFLEQTLKQIQSLITHEHFSENYTLVLKQMSLLLETLPELISLKGKLLEHEIK
Sequences:
>Translated_716_residues MNNLTQLFNRFKTNSILIYCLQILIVLTGTTLGLLWLGHNELIVPVTLGAIAAALTDFDDRLSLRLRNLLYVCLLFFTVS TILGFLAPYKFLFILYLSISSACFILLGALGQRYATISFGTILLSIYSMFGLGEYAHWYQQPTYFVYGALWYGLTSILFF ILKPTLPLQDKLSQIFEEISALLQAKARLFDPDNKENVEQLLFELSLQNTQVAQSLNQIRSSLLTRLKASRVSNKSIYWL NLYFFARDIHEQATSNYLHYEHIQQNFSRSDLIFRFQKNLRLQAQACHDLAQCILHNQQYQSSQESQIGLNHLESSLKDW IQQHPQNFEVKNLKLIFNNLKGMHEQFEQLQYAQPLNETLSQNKQEHLNLLDDDIQGFSDLVLKIRQQLTPQSALFRHAV RIAVVFAAGYAISLLPFAQHGYWILLTSLFVCQITYFATKSRLKLRTIGTLLGVLLGIPILYFVPSIEGQLILTIICGVS FFYLRQKKYALATLMATLMVLLIFNLKGAGYSIILPRLIDTLLGCFIAWLAVNFIWPDWNFRNIPNNIKKSSQATFDYFN MIVEQYQHGKNQDIEYRRIRRAAHNAQIELSNMISSLSAEPNPNPELIHYAFRYLVYSHSQLSYVAALGSQRQKIDDQQV LQLLLDCQQILKQSLFEQASVNFSFLEQTLKQIQSLITHEHFSENYTLVLKQMSLLLETLPELISLKGKLLEHEIK >Mature_716_residues MNNLTQLFNRFKTNSILIYCLQILIVLTGTTLGLLWLGHNELIVPVTLGAIAAALTDFDDRLSLRLRNLLYVCLLFFTVS TILGFLAPYKFLFILYLSISSACFILLGALGQRYATISFGTILLSIYSMFGLGEYAHWYQQPTYFVYGALWYGLTSILFF ILKPTLPLQDKLSQIFEEISALLQAKARLFDPDNKENVEQLLFELSLQNTQVAQSLNQIRSSLLTRLKASRVSNKSIYWL NLYFFARDIHEQATSNYLHYEHIQQNFSRSDLIFRFQKNLRLQAQACHDLAQCILHNQQYQSSQESQIGLNHLESSLKDW IQQHPQNFEVKNLKLIFNNLKGMHEQFEQLQYAQPLNETLSQNKQEHLNLLDDDIQGFSDLVLKIRQQLTPQSALFRHAV RIAVVFAAGYAISLLPFAQHGYWILLTSLFVCQITYFATKSRLKLRTIGTLLGVLLGIPILYFVPSIEGQLILTIICGVS FFYLRQKKYALATLMATLMVLLIFNLKGAGYSIILPRLIDTLLGCFIAWLAVNFIWPDWNFRNIPNNIKKSSQATFDYFN MIVEQYQHGKNQDIEYRRIRRAAHNAQIELSNMISSLSAEPNPNPELIHYAFRYLVYSHSQLSYVAALGSQRQKIDDQQV LQLLLDCQQILKQSLFEQASVNFSFLEQTLKQIQSLITHEHFSENYTLVLKQMSLLLETLPELISLKGKLLEHEIK
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yccS/yhfK family [H]
Homologues:
Organism=Escherichia coli, GI87081808, Length=715, Percent_Identity=42.5174825174825, Blast_Score=594, Evalue=1e-171, Organism=Escherichia coli, GI87082248, Length=521, Percent_Identity=25.7197696737044, Blast_Score=109, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010019 - InterPro: IPR010020 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82572; Mature: 82572
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLTQLFNRFKTNSILIYCLQILIVLTGTTLGLLWLGHNELIVPVTLGAIAAALTDFDD CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHEEEECCCCEEEHHHHHHHHHHHHCHHH RLSLRLRNLLYVCLLFFTVSTILGFLAPYKFLFILYLSISSACFILLGALGQRYATISFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH TILLSIYSMFGLGEYAHWYQQPTYFVYGALWYGLTSILFFILKPTLPLQDKLSQIFEEIS HHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ALLQAKARLFDPDNKENVEQLLFELSLQNTQVAQSLNQIRSSLLTRLKASRVSNKSIYWL HHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE NLYFFARDIHEQATSNYLHYEHIQQNFSRSDLIFRFQKNLRLQAQACHDLAQCILHNQQY EHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH QSSQESQIGLNHLESSLKDWIQQHPQNFEVKNLKLIFNNLKGMHEQFEQLQYAQPLNETL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH SQNKQEHLNLLDDDIQGFSDLVLKIRQQLTPQSALFRHAVRIAVVFAAGYAISLLPFAQH HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GYWILLTSLFVCQITYFATKSRLKLRTIGTLLGVLLGIPILYFVPSIEGQLILTIICGVS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FFYLRQKKYALATLMATLMVLLIFNLKGAGYSIILPRLIDTLLGCFIAWLAVNFIWPDWN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCC FRNIPNNIKKSSQATFDYFNMIVEQYQHGKNQDIEYRRIRRAAHNAQIELSNMISSLSAE CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCC PNPNPELIHYAFRYLVYSHSQLSYVAALGSQRQKIDDQQVLQLLLDCQQILKQSLFEQAS CCCCHHHHHHHHHHHHHHCCHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC VNFSFLEQTLKQIQSLITHEHFSENYTLVLKQMSLLLETLPELISLKGKLLEHEIK CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNLTQLFNRFKTNSILIYCLQILIVLTGTTLGLLWLGHNELIVPVTLGAIAAALTDFDD CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHEEEECCCCEEEHHHHHHHHHHHHCHHH RLSLRLRNLLYVCLLFFTVSTILGFLAPYKFLFILYLSISSACFILLGALGQRYATISFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH TILLSIYSMFGLGEYAHWYQQPTYFVYGALWYGLTSILFFILKPTLPLQDKLSQIFEEIS HHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ALLQAKARLFDPDNKENVEQLLFELSLQNTQVAQSLNQIRSSLLTRLKASRVSNKSIYWL HHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE NLYFFARDIHEQATSNYLHYEHIQQNFSRSDLIFRFQKNLRLQAQACHDLAQCILHNQQY EHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH QSSQESQIGLNHLESSLKDWIQQHPQNFEVKNLKLIFNNLKGMHEQFEQLQYAQPLNETL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH SQNKQEHLNLLDDDIQGFSDLVLKIRQQLTPQSALFRHAVRIAVVFAAGYAISLLPFAQH HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GYWILLTSLFVCQITYFATKSRLKLRTIGTLLGVLLGIPILYFVPSIEGQLILTIICGVS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FFYLRQKKYALATLMATLMVLLIFNLKGAGYSIILPRLIDTLLGCFIAWLAVNFIWPDWN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCC FRNIPNNIKKSSQATFDYFNMIVEQYQHGKNQDIEYRRIRRAAHNAQIELSNMISSLSAE CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCC PNPNPELIHYAFRYLVYSHSQLSYVAALGSQRQKIDDQQVLQLLLDCQQILKQSLFEQAS CCCCHHHHHHHHHHHHHHCCHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC VNFSFLEQTLKQIQSLITHEHFSENYTLVLKQMSLLLETLPELISLKGKLLEHEIK CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]