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The map label for this gene is sodC [H]

Identifier: 213158898

GI number: 213158898

Start: 3705553

End: 3706128

Strand: Direct

Name: sodC [H]

Synonym: AB57_3598

Alternate gene names: 213158898

Gene position: 3705553-3706128 (Clockwise)

Preceding gene: 213158897

Following gene: 213158899

Centisome position: 91.48

GC content: 43.4

Gene sequence:

>576_bases
ATGCCAGTATTTAATAAAATTGGTGCAGTATGTGCACTGACAGCTTTATTAACGGTTGGTTGTAGCACGGTAAGTAAGAC
TGTATCTGATACAGCCCATGCACTTACCACAATGCATACTAAAAAAGTGGTGGATGTTAATGAAGTGACAGCTAATGGTA
TAGGTAAAAAAATTGGTACGATTAGCTTTCAAGATAGTGATAAGGGCTTAATCATTACCCCTGCTTTAGCAGATTTACCA
AGTGGTACTCGCGGTTTCCACATCCATGAAAATCCATCTTGTGCCCCTGCTGTTAAAGATGGAAAACCAGGCGCTGCTTT
AGCTGCTGGTAGCCACTATAACCCTAACCAAGCCCCACATCATGGTACGCCAACTACTGGGCATTTAGGCGATTTACCAG
CATTAGTCGTTGACAATACTGGTGTAGCTACAACTGCTGTTATTGCACCACGTTTAAAACTTGCTGACATTCAAGGTCGC
GCTATCATGATCCATGCTGGTGGTGATAACTATTCAGATTCTCCTCTGCCTCTAGGTGGTGGCGGAGCGCGAATCGCATG
TGGTGTAATCAAATAA

Upstream 100 bases:

>100_bases
ATATTTCAAGATACAAAGTGACTATTTAAATTAACTTGTAGGGTTCACGCACCTTTGCTTGAATAAAAAAATCAGATTTA
TAGTTATAAGGATATCTATA

Downstream 100 bases:

>100_bases
GTGCTTTTTTTAAATTGTGGGTATCTAAAAAGATATCCACAATTTTGCTATTTTATTAAGCAACTTAGACTAATTAATTA
TTATAAAATCTTAAAAAATA

Product: copper/zinc superoxide dismutase

Products: NA

Alternate protein names: Bacteriocuprein [H]

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MPVFNKIGAVCALTALLTVGCSTVSKTVSDTAHALTTMHTKKVVDVNEVTANGIGKKIGTISFQDSDKGLIITPALADLP
SGTRGFHIHENPSCAPAVKDGKPGAALAAGSHYNPNQAPHHGTPTTGHLGDLPALVVDNTGVATTAVIAPRLKLADIQGR
AIMIHAGGDNYSDSPLPLGGGGARIACGVIK

Sequences:

>Translated_191_residues
MPVFNKIGAVCALTALLTVGCSTVSKTVSDTAHALTTMHTKKVVDVNEVTANGIGKKIGTISFQDSDKGLIITPALADLP
SGTRGFHIHENPSCAPAVKDGKPGAALAAGSHYNPNQAPHHGTPTTGHLGDLPALVVDNTGVATTAVIAPRLKLADIQGR
AIMIHAGGDNYSDSPLPLGGGGARIACGVIK
>Mature_190_residues
PVFNKIGAVCALTALLTVGCSTVSKTVSDTAHALTTMHTKKVVDVNEVTANGIGKKIGTISFQDSDKGLIITPALADLPS
GTRGFHIHENPSCAPAVKDGKPGAALAAGSHYNPNQAPHHGTPTTGHLGDLPALVVDNTGVATTAVIAPRLKLADIQGRA
IMIHAGGDNYSDSPLPLGGGGARIACGVIK

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

Organism=Escherichia coli, GI1787934, Length=150, Percent_Identity=58, Blast_Score=170, Evalue=6e-44,
Organism=Drosophila melanogaster, GI281363087, Length=120, Percent_Identity=37.5, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24652342, Length=120, Percent_Identity=37.5, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 19309; Mature: 19178

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00087 SOD_CU_ZN_1 ; PS00332 SOD_CU_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVFNKIGAVCALTALLTVGCSTVSKTVSDTAHALTTMHTKKVVDVNEVTANGIGKKIGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHCCCCCHHEE
ISFQDSDKGLIITPALADLPSGTRGFHIHENPSCAPAVKDGKPGAALAAGSHYNPNQAPH
EEECCCCCCEEEECHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
HGTPTTGHLGDLPALVVDNTGVATTAVIAPRLKLADIQGRAIMIHAGGDNYSDSPLPLGG
CCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCEECC
GGARIACGVIK
CCCEEEEEECC
>Mature Secondary Structure 
PVFNKIGAVCALTALLTVGCSTVSKTVSDTAHALTTMHTKKVVDVNEVTANGIGKKIGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHCCCCCHHEE
ISFQDSDKGLIITPALADLPSGTRGFHIHENPSCAPAVKDGKPGAALAAGSHYNPNQAPH
EEECCCCCCEEEECHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
HGTPTTGHLGDLPALVVDNTGVATTAVIAPRLKLADIQGRAIMIHAGGDNYSDSPLPLGG
CCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCEECC
GGARIACGVIK
CCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]