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The map label for this gene is ydiK [H]

Identifier: 213158897

GI number: 213158897

Start: 3704319

End: 3705437

Strand: Direct

Name: ydiK [H]

Synonym: AB57_3597

Alternate gene names: 213158897

Gene position: 3704319-3705437 (Clockwise)

Preceding gene: 213158896

Following gene: 213158898

Centisome position: 91.45

GC content: 37.89

Gene sequence:

>1119_bases
GTGCATCCATACGCTCCTACTTTACAGCGCGTTTTATTGTTTGGGCTGTTTTTTATCCTGATCTTTTTAGGATTTAACAT
CCTGAAGTACTTTATTGTACCTGTACTTTGGGCTGCCATTATTGCCTACATGACTTGGCCGATTTATTTAAGAATTCAGC
ATTTTTTTGGTGAAAACCGAAATAATTTAAATGCTACAGTTATGATTAGCTTAGTCATTTTAATTGTTGGTGTGCCATTT
ACATGTGCTATTTTTATTCTACAACATGAAGGCCGAAACCTTTATTTTGATTTACAGCGTCAAGTCTTTTCAGGTCATTT
AAGCGTTCCCGATTTTATTCGTAATCTTCCGTTTATTGGTAAAGAAATATCTCGCACACTCAACGAAATTAACACAGACC
CTAATAGTACTATTCAAAATATTGCAGCTTGGGTACAAAGCCATTTAAGTTATGGGCGTGTGTTATTAAATGAAATTAGT
AAAAATATCGTCAAACTTTGTTTTGCAATTTTAAGTCTTTTCTTCTTTTATCGTGATGGTCACACGATCTTAACCCAAGT
GAGTAAAGCCTTGGAAATGGTGATTGGGCCACGTATTCATCATTATCTCGACACAATTTCAGAAACCACTCGTGCCGTTG
TGTATGGCGTGGGTTTAACTGCAATTGCTCAAGCAGTACTGGCTGGATTAAGTTATTTCGTCGCTGGTGTACCTAACCCA
ATGGTTCTCACCATTGCAACGTTCTTATTAGCCCTAATTCCGTTTGGTACTCCTGTTTCCTACTTAGGCGTTGGACTATG
GTTGTTCTCTCAAGGTCAAACTATGGAAGCTATTGGCGTCATCTTATGGGGTGTGCTGATTGTAAGTAGTTCAGACAACG
TGATCCGTCCACTTGTAATCTCTGGTGCGACTCAAATTCCGTTTTTATTGATTATGTTCGGTGTATTGGGTGGAATTGCA
AGTTTTGGTTTAGTTGGTCTATTTATTGGCCCTGTTATTTTAGCTGTTTTATTAGCAATTTGGCGTGAATGGCTTCACGA
GACAATTGACCCTGAACCCATGCCAAAAACAACCATGATTTATGATTCAGATGATGATTTACCACCATCTAAAAACTAA

Upstream 100 bases:

>100_bases
GGCAAGATGCAGAAATGAGCACGCCTGCCTAAAATTTGTCTCAGGTCATTTTTCAGTTAATATGACCTTATTCTATTTTA
AAAATTAGAGAATTTTGTTC

Downstream 100 bases:

>100_bases
GCTAATGATTTAAAAATATTTCAAGATACAAAGTGACTATTTAAATTAACTTGTAGGGTTCACGCACCTTTGCTTGAATA
AAAAAATCAGATTTATAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MHPYAPTLQRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQHFFGENRNNLNATVMISLVILIVGVPF
TCAIFILQHEGRNLYFDLQRQVFSGHLSVPDFIRNLPFIGKEISRTLNEINTDPNSTIQNIAAWVQSHLSYGRVLLNEIS
KNIVKLCFAILSLFFFYRDGHTILTQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNP
MVLTIATFLLALIPFGTPVSYLGVGLWLFSQGQTMEAIGVILWGVLIVSSSDNVIRPLVISGATQIPFLLIMFGVLGGIA
SFGLVGLFIGPVILAVLLAIWREWLHETIDPEPMPKTTMIYDSDDDLPPSKN

Sequences:

>Translated_372_residues
MHPYAPTLQRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQHFFGENRNNLNATVMISLVILIVGVPF
TCAIFILQHEGRNLYFDLQRQVFSGHLSVPDFIRNLPFIGKEISRTLNEINTDPNSTIQNIAAWVQSHLSYGRVLLNEIS
KNIVKLCFAILSLFFFYRDGHTILTQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNP
MVLTIATFLLALIPFGTPVSYLGVGLWLFSQGQTMEAIGVILWGVLIVSSSDNVIRPLVISGATQIPFLLIMFGVLGGIA
SFGLVGLFIGPVILAVLLAIWREWLHETIDPEPMPKTTMIYDSDDDLPPSKN
>Mature_372_residues
MHPYAPTLQRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQHFFGENRNNLNATVMISLVILIVGVPF
TCAIFILQHEGRNLYFDLQRQVFSGHLSVPDFIRNLPFIGKEISRTLNEINTDPNSTIQNIAAWVQSHLSYGRVLLNEIS
KNIVKLCFAILSLFFFYRDGHTILTQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNP
MVLTIATFLLALIPFGTPVSYLGVGLWLFSQGQTMEAIGVILWGVLIVSSSDNVIRPLVISGATQIPFLLIMFGVLGGIA
SFGLVGLFIGPVILAVLLAIWREWLHETIDPEPMPKTTMIYDSDDDLPPSKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=351, Percent_Identity=28.4900284900285, Blast_Score=128, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41455; Mature: 41455

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPYAPTLQRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQHFFGENR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NNLNATVMISLVILIVGVPFTCAIFILQHEGRNLYFDLQRQVFSGHLSVPDFIRNLPFIG
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCH
KEISRTLNEINTDPNSTIQNIAAWVQSHLSYGRVLLNEISKNIVKLCFAILSLFFFYRDG
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HTILTQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNP
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
MVLTIATFLLALIPFGTPVSYLGVGLWLFSQGQTMEAIGVILWGVLIVSSSDNVIRPLVI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
SGATQIPFLLIMFGVLGGIASFGLVGLFIGPVILAVLLAIWREWLHETIDPEPMPKTTMI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
YDSDDDLPPSKN
ECCCCCCCCCCC
>Mature Secondary Structure
MHPYAPTLQRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQHFFGENR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NNLNATVMISLVILIVGVPFTCAIFILQHEGRNLYFDLQRQVFSGHLSVPDFIRNLPFIG
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCH
KEISRTLNEINTDPNSTIQNIAAWVQSHLSYGRVLLNEISKNIVKLCFAILSLFFFYRDG
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HTILTQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNP
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
MVLTIATFLLALIPFGTPVSYLGVGLWLFSQGQTMEAIGVILWGVLIVSSSDNVIRPLVI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
SGATQIPFLLIMFGVLGGIASFGLVGLFIGPVILAVLLAIWREWLHETIDPEPMPKTTMI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
YDSDDDLPPSKN
ECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]