BacMap

Definition	Acinetobacter baumannii AB0057, complete genome.
Accession	NC_011586
Length	4,050,513

Click here to switch to the map view.

The map label for this gene is 213158781

Identifier: 213158781

GI number: 213158781

Start: 4040897

End: 4042375

Strand: Reverse

Name: 213158781

Synonym: AB57_3915

Alternate gene names: NA

Gene position: 4042375-4040897 (Counterclockwise)

Preceding gene: 213158784

Following gene: 213158780

Centisome position: 99.8

GC content: 39.28

Gene sequence:

>1479_bases
ATGACAGATACTCGTGAAAACTGGACGTCACGATCTGGTTTTATTATTGCAGCCGTTGGTTCGGCTGTAGGCTTAGGTAA
TATTTGGCGCTTTCCGTACGTTGCGTATGAAAATGGCGGTGGTGCGTTTCTTATTCCCTATCTATTAGCACTCATTACTG
CAGGTTTACCGTTATTATTTTTAGATTATGCGGTAGGCCATCGTAGTACTGGTTCACCTCCTAAGGCATATCGTGCCTTA
TTTAAAGGTGGTGAAACATTAGGGTGGTGGCAGGTTTGTGTCTGTATCATCATTGGTTTGTACTATGCAAGTGTACTTAC
ATGGGCTGGTAGCTATATTTACTTCTCTATTGGCCAAATGTGGGGAAGTGATCCGGAAGGTTTCTTCTTTAATACCTATT
TGCAGACCACAAAAGCAACCGGCTTTGATCTACAGTTTGTAGGTCATTTATTCTGGCCGATTGTTGGGATTTGGGCACTT
ACTCTCATCATTCTTTATGGTGGTGTGAAAAAAGGTGTGGAATTATCAAATAAGATTTTCATGCCTTTATTATTCATTCT
CTTCACTATTTTAGTTATTCAATCATTACGTTTACCAGGTGCGGTACAAGGTTTAAATGCATTCTTTACACCGAACTGGT
CTGCAATGATGGATTATAAAGTTTGGTTAGCTGCCTATGGCCATACTTTCTTTTCACTCTCAGTTGGTTTCGGGATCATG
GTGACCTATGCATCCTATTTAAAACCAAAAACGAATTTAACTGGTTCTGGTTTAATCGTTGGTTTTGCAAATGCATCAAC
AGAGATTTTAGCGGGTATTGGTATCTTCGCAGCGCTTGGCTTTATGGCACATGCCGCAGGTACTGAAGTTAAGGATGTTG
TGAGTGGCGGTATCGGACTCGCATTTATTGCTTTCCCTAAAATTATTTCAAGTTTAGGTTCTGGTGCTGATCTATTCGGT
CTTTTGTTCTTCTCTTCATTATTTGTTGCTGGTATTTCTTCAATGGTCAGTATTTTGGAAGTGCCTATTGCAGCAATGCA
AGATAAGTTAAAGTGGGGACGTAAGAAAGCGGTAACGATTATTGGTGGTGGTAGTGCACTGGTTTCAATTATTTTATTCT
CAAGTGTAAACGCAATTAAGCTCGTTGATATTGTTGATCACTTTATTAATAACATTGGGATTATTGGTGGGGCTTTATTA
TCAATTATTAGCGTAGCTTGGTTTAAACGTTCAGCACTTAAAGAGCTTCGCGACCATGTAAACCGTATCTCAACCATTCA
ATTGGGCAAAGGTTGGGACTTCACTTTAACAGTCATTACCTCTTTAATCTTATTAACAACACTCTGTATGACTGTTTTTA
ATTTGATCAAAAATGGCTATGATACTTATAGTATGAGCTTACAAGGTGTCTTCGGCTGGGGCAGTGTGATTTTCTGTGCA
GTCGTTGCTATCGTGTTAAGTAAAATGAAAGATCGCTAG

Upstream 100 bases:

>100_bases
TTCTACAAACACAAAAGTATTTTTTGGTTCTTTTTTTGCATGCGGAATAACAATCAACAATAGCAGTAAAAATAAGTAAT
CTTTTAACATTAGGTGTTCT

Downstream 100 bases:

>100_bases
GAGGATAAAATAATGAATACTTCGGCAATCGTGATGTTAATAATTTCGATGGTATTTGTATGGGGTGGATTAGCACTATC
CATCTTACATTTAACAAAGC

Product: sodium-and chloride-dependent transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MTDTRENWTSRSGFIIAAVGSAVGLGNIWRFPYVAYENGGGAFLIPYLLALITAGLPLLFLDYAVGHRSTGSPPKAYRAL
FKGGETLGWWQVCVCIIIGLYYASVLTWAGSYIYFSIGQMWGSDPEGFFFNTYLQTTKATGFDLQFVGHLFWPIVGIWAL
TLIILYGGVKKGVELSNKIFMPLLFILFTILVIQSLRLPGAVQGLNAFFTPNWSAMMDYKVWLAAYGHTFFSLSVGFGIM
VTYASYLKPKTNLTGSGLIVGFANASTEILAGIGIFAALGFMAHAAGTEVKDVVSGGIGLAFIAFPKIISSLGSGADLFG
LLFFSSLFVAGISSMVSILEVPIAAMQDKLKWGRKKAVTIIGGGSALVSIILFSSVNAIKLVDIVDHFINNIGIIGGALL
SIISVAWFKRSALKELRDHVNRISTIQLGKGWDFTLTVITSLILLTTLCMTVFNLIKNGYDTYSMSLQGVFGWGSVIFCA
VVAIVLSKMKDR

Sequences:

>Translated_492_residues
MTDTRENWTSRSGFIIAAVGSAVGLGNIWRFPYVAYENGGGAFLIPYLLALITAGLPLLFLDYAVGHRSTGSPPKAYRAL
FKGGETLGWWQVCVCIIIGLYYASVLTWAGSYIYFSIGQMWGSDPEGFFFNTYLQTTKATGFDLQFVGHLFWPIVGIWAL
TLIILYGGVKKGVELSNKIFMPLLFILFTILVIQSLRLPGAVQGLNAFFTPNWSAMMDYKVWLAAYGHTFFSLSVGFGIM
VTYASYLKPKTNLTGSGLIVGFANASTEILAGIGIFAALGFMAHAAGTEVKDVVSGGIGLAFIAFPKIISSLGSGADLFG
LLFFSSLFVAGISSMVSILEVPIAAMQDKLKWGRKKAVTIIGGGSALVSIILFSSVNAIKLVDIVDHFINNIGIIGGALL
SIISVAWFKRSALKELRDHVNRISTIQLGKGWDFTLTVITSLILLTTLCMTVFNLIKNGYDTYSMSLQGVFGWGSVIFCA
VVAIVLSKMKDR
>Mature_491_residues
TDTRENWTSRSGFIIAAVGSAVGLGNIWRFPYVAYENGGGAFLIPYLLALITAGLPLLFLDYAVGHRSTGSPPKAYRALF
KGGETLGWWQVCVCIIIGLYYASVLTWAGSYIYFSIGQMWGSDPEGFFFNTYLQTTKATGFDLQFVGHLFWPIVGIWALT
LIILYGGVKKGVELSNKIFMPLLFILFTILVIQSLRLPGAVQGLNAFFTPNWSAMMDYKVWLAAYGHTFFSLSVGFGIMV
TYASYLKPKTNLTGSGLIVGFANASTEILAGIGIFAALGFMAHAAGTEVKDVVSGGIGLAFIAFPKIISSLGSGADLFGL
LFFSSLFVAGISSMVSILEVPIAAMQDKLKWGRKKAVTIIGGGSALVSIILFSSVNAIKLVDIVDHFINNIGIIGGALLS
IISVAWFKRSALKELRDHVNRISTIQLGKGWDFTLTVITSLILLTTLCMTVFNLIKNGYDTYSMSLQGVFGWGSVIFCAV
VAIVLSKMKDR

Specific function: Putative sodium-dependent transporter [H]

COG id: COG0733

COG function: function code R; Na+-dependent transporters of the SNF family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family [H]

Homologues:

Organism=Homo sapiens, GI289191377, Length=503, Percent_Identity=29.0258449304175, Blast_Score=205, Evalue=8e-53,
Organism=Homo sapiens, GI289191351, Length=503, Percent_Identity=29.0258449304175, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI4557046, Length=503, Percent_Identity=29.0258449304175, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI4507043, Length=488, Percent_Identity=27.6639344262295, Blast_Score=190, Evalue=3e-48,
Organism=Homo sapiens, GI188528618, Length=476, Percent_Identity=28.781512605042, Blast_Score=188, Evalue=8e-48,
Organism=Homo sapiens, GI92859670, Length=545, Percent_Identity=26.9724770642202, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI4507041, Length=504, Percent_Identity=26.7857142857143, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI21361581, Length=443, Percent_Identity=28.2167042889391, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI194018524, Length=523, Percent_Identity=27.7246653919694, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI134304856, Length=351, Percent_Identity=31.9088319088319, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI67782317, Length=506, Percent_Identity=28.4584980237154, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI67782313, Length=518, Percent_Identity=27.992277992278, Blast_Score=165, Evalue=9e-41,
Organism=Homo sapiens, GI67782315, Length=518, Percent_Identity=27.992277992278, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI7657587, Length=378, Percent_Identity=28.5714285714286, Blast_Score=163, Evalue=4e-40,
Organism=Homo sapiens, GI197276623, Length=341, Percent_Identity=29.0322580645161, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI54607094, Length=341, Percent_Identity=29.0322580645161, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI171184408, Length=441, Percent_Identity=27.437641723356, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI171184406, Length=441, Percent_Identity=27.437641723356, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI171184404, Length=441, Percent_Identity=27.437641723356, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI51468073, Length=521, Percent_Identity=24.5681381957774, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI5032097, Length=346, Percent_Identity=29.1907514450867, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI58219014, Length=303, Percent_Identity=33.003300330033, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI33354281, Length=305, Percent_Identity=31.8032786885246, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI11181770, Length=306, Percent_Identity=32.0261437908497, Blast_Score=139, Evalue=7e-33,
Organism=Homo sapiens, GI218563756, Length=346, Percent_Identity=28.6127167630058, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI289191353, Length=417, Percent_Identity=25.8992805755396, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI6005715, Length=324, Percent_Identity=29.9382716049383, Blast_Score=119, Evalue=8e-27,
Organism=Homo sapiens, GI12408638, Length=287, Percent_Identity=31.0104529616725, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI300360519, Length=274, Percent_Identity=27.3722627737226, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI21361693, Length=210, Percent_Identity=31.4285714285714, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI197276625, Length=115, Percent_Identity=37.3913043478261, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI218563758, Length=170, Percent_Identity=30.5882352941176, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI226437581, Length=257, Percent_Identity=26.8482490272374, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI55749589, Length=315, Percent_Identity=27.3015873015873, Blast_Score=79, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17555248, Length=521, Percent_Identity=24.9520153550864, Blast_Score=167, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI25146584, Length=502, Percent_Identity=26.0956175298805, Blast_Score=167, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI71995588, Length=452, Percent_Identity=28.0973451327434, Blast_Score=166, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI133952791, Length=427, Percent_Identity=29.2740046838407, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17554804, Length=460, Percent_Identity=28.2608695652174, Blast_Score=148, Evalue=7e-36,
Organism=Caenorhabditis elegans, GI17535731, Length=511, Percent_Identity=26.4187866927593, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI212642127, Length=483, Percent_Identity=25.4658385093168, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17569475, Length=392, Percent_Identity=26.530612244898, Blast_Score=135, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI17542050, Length=425, Percent_Identity=26.8235294117647, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71998244, Length=361, Percent_Identity=29.0858725761773, Blast_Score=118, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI115534083, Length=465, Percent_Identity=23.010752688172, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17542048, Length=388, Percent_Identity=21.3917525773196, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24762620, Length=485, Percent_Identity=28.8659793814433, Blast_Score=193, Evalue=3e-49,
Organism=Drosophila melanogaster, GI19921936, Length=529, Percent_Identity=30.2457466918715, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI17136952, Length=450, Percent_Identity=28.6666666666667, Blast_Score=189, Evalue=3e-48,
Organism=Drosophila melanogaster, GI45550877, Length=532, Percent_Identity=27.6315789473684, Blast_Score=189, Evalue=3e-48,
Organism=Drosophila melanogaster, GI45551183, Length=433, Percent_Identity=30.0230946882217, Blast_Score=188, Evalue=7e-48,
Organism=Drosophila melanogaster, GI281364394, Length=454, Percent_Identity=29.0748898678414, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI28574704, Length=454, Percent_Identity=29.0748898678414, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI17136950, Length=454, Percent_Identity=29.0748898678414, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI28574702, Length=454, Percent_Identity=29.0748898678414, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24661428, Length=520, Percent_Identity=27.1153846153846, Blast_Score=182, Evalue=5e-46,
Organism=Drosophila melanogaster, GI24582567, Length=446, Percent_Identity=29.5964125560538, Blast_Score=179, Evalue=4e-45,
Organism=Drosophila melanogaster, GI24639514, Length=513, Percent_Identity=25.9259259259259, Blast_Score=175, Evalue=7e-44,
Organism=Drosophila melanogaster, GI221329674, Length=513, Percent_Identity=25.9259259259259, Blast_Score=175, Evalue=7e-44,
Organism=Drosophila melanogaster, GI45551088, Length=427, Percent_Identity=30.4449648711944, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24652942, Length=427, Percent_Identity=30.4449648711944, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI281363702, Length=504, Percent_Identity=27.9761904761905, Blast_Score=172, Evalue=3e-43,
Organism=Drosophila melanogaster, GI281365034, Length=493, Percent_Identity=26.9776876267748, Blast_Score=172, Evalue=5e-43,
Organism=Drosophila melanogaster, GI281364136, Length=412, Percent_Identity=30.8252427184466, Blast_Score=172, Evalue=5e-43,
Organism=Drosophila melanogaster, GI24655079, Length=522, Percent_Identity=28.1609195402299, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI19921352, Length=499, Percent_Identity=27.0541082164329, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI24584353, Length=499, Percent_Identity=27.0541082164329, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI24639516, Length=533, Percent_Identity=25.515947467167, Blast_Score=169, Evalue=5e-42,
Organism=Drosophila melanogaster, GI24639853, Length=401, Percent_Identity=31.6708229426434, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI281363700, Length=332, Percent_Identity=31.6265060240964, Blast_Score=151, Evalue=8e-37,
Organism=Drosophila melanogaster, GI24654186, Length=383, Percent_Identity=28.4595300261097, Blast_Score=132, Evalue=6e-31,
Organism=Drosophila melanogaster, GI24582569, Length=407, Percent_Identity=27.7641277641278, Blast_Score=130, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000175 [H]

Pfam domain/function: PF00209 SNF [H]

EC number: NA

Molecular weight: Translated: 53230; Mature: 53099

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS00610 NA_NEUROTRAN_SYMP_1 ; PS50267 NA_NEUROTRAN_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTRENWTSRSGFIIAAVGSAVGLGNIWRFPYVAYENGGGAFLIPYLLALITAGLPLLF
CCCCCCCCCCCCCEEEEECCCHHCCCCHHCCCEEEEECCCCEEHHHHHHHHHHCCCHHHH
LDYAVGHRSTGSPPKAYRALFKGGETLGWWQVCVCIIIGLYYASVLTWAGSYIYFSIGQM
HHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHH
WGSDPEGFFFNTYLQTTKATGFDLQFVGHLFWPIVGIWALTLIILYGGVKKGVELSNKIF
CCCCCCCCEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHH
MPLLFILFTILVIQSLRLPGAVQGLNAFFTPNWSAMMDYKVWLAAYGHTFFSLSVGFGIM
HHHHHHHHHHHHHHHHCCCCHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTYASYLKPKTNLTGSGLIVGFANASTEILAGIGIFAALGFMAHAAGTEVKDVVSGGIGL
HHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHH
AFIAFPKIISSLGSGADLFGLLFFSSLFVAGISSMVSILEVPIAAMQDKLKWGRKKAVTI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
IGGGSALVSIILFSSVNAIKLVDIVDHFINNIGIIGGALLSIISVAWFKRSALKELRDHV
EECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRISTIQLGKGWDFTLTVITSLILLTTLCMTVFNLIKNGYDTYSMSLQGVFGWGSVIFCA
HHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEECCHHHHHHHH
VVAIVLSKMKDR
HHHHHHHHHCCC
>Mature Secondary Structure 
TDTRENWTSRSGFIIAAVGSAVGLGNIWRFPYVAYENGGGAFLIPYLLALITAGLPLLF
CCCCCCCCCCCCEEEEECCCHHCCCCHHCCCEEEEECCCCEEHHHHHHHHHHCCCHHHH
LDYAVGHRSTGSPPKAYRALFKGGETLGWWQVCVCIIIGLYYASVLTWAGSYIYFSIGQM
HHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHH
WGSDPEGFFFNTYLQTTKATGFDLQFVGHLFWPIVGIWALTLIILYGGVKKGVELSNKIF
CCCCCCCCEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHH
MPLLFILFTILVIQSLRLPGAVQGLNAFFTPNWSAMMDYKVWLAAYGHTFFSLSVGFGIM
HHHHHHHHHHHHHHHHCCCCHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTYASYLKPKTNLTGSGLIVGFANASTEILAGIGIFAALGFMAHAAGTEVKDVVSGGIGL
HHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHH
AFIAFPKIISSLGSGADLFGLLFFSSLFVAGISSMVSILEVPIAAMQDKLKWGRKKAVTI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
IGGGSALVSIILFSSVNAIKLVDIVDHFINNIGIIGGALLSIISVAWFKRSALKELRDHV
EECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRISTIQLGKGWDFTLTVITSLILLTTLCMTVFNLIKNGYDTYSMSLQGVFGWGSVIFCA
HHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEECCHHHHHHHH
VVAIVLSKMKDR
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]