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The map label for this gene is yaeB [C]

Identifier: 213158692

GI number: 213158692

Start: 2737829

End: 2738524

Strand: Reverse

Name: yaeB [C]

Synonym: AB57_2648

Alternate gene names: 213158692

Gene position: 2738524-2737829 (Counterclockwise)

Preceding gene: 213158694

Following gene: 213158690

Centisome position: 67.61

GC content: 36.78

Gene sequence:

>696_bases
ATGTGCTCACCTTTTCGAGAAAAATTTGGTATTCCACGTCAGCCTAATTTGGTCAATATCGAGTCTTATATCGAAATGGT
AGAACCTTATAATGACTTATTAGCTTTTGAGGGAATCGAACAATTTAGTCATCTTTGGCTCATCTGGCAGTTTCATGACA
ATAAAAATCAGGAGACTGCAACTAAGTTTCGGCCTCAAGTTCGCCCACCACGTCTAGGGGGCAATGAAAAAATAGGTGTG
TTTGCAACACGTAGTATGTATCGTCCGGCGCCTATAGGCTTATCTGTAGTACGTTTAAACAAGGTTGAAAAAGTCGGTAA
ATCATTAAGAGTTTATGTTACTGGCAGTGATTTATTAAATGGCACGCCAATTTTAGATATTAAGCCTTATATTCAATATT
CAGATGCAATCGTTGATGCTCAAAGTGGTTATGCGCAGGCCGAACCAGAACGAAAATCGGTCTTATGGTCTGAAAATGCA
TTGTCTACCCAGCAGTCTCTTTTTAAAAATAAAGAAATTAATGCACAATATCTTGATGAATTAGAACAAGTATTATCATT
AGATCCTAGACCTGCCTATCAAGAAGACCCTGAACGAGTCTATAAAATGAAATTTTCGAATTTTGATATTCATTTTAAAG
TTAATGGCAATGTCATTACAGTTGTTGATATGGTGAAAGACACATCGCTCGTGTAA

Upstream 100 bases:

>100_bases
TATTCTAATCTAATTTCATTCCCGATAAACTGAATATATTTAATTGTGTTTATAAGAAAAAGTGATGATGAATTCTGTCA
CCCTCCCAATAGTCGGGCAC

Downstream 100 bases:

>100_bases
TAAAGCTATTTAGAACCAATGTATGTTCATCCAGAGCAAGCCAATAAATATTGTCATATGCAAAATTTGGGCAGGTATGA
AAGCAAGGGCATAATGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MCSPFREKFGIPRQPNLVNIESYIEMVEPYNDLLAFEGIEQFSHLWLIWQFHDNKNQETATKFRPQVRPPRLGGNEKIGV
FATRSMYRPAPIGLSVVRLNKVEKVGKSLRVYVTGSDLLNGTPILDIKPYIQYSDAIVDAQSGYAQAEPERKSVLWSENA
LSTQQSLFKNKEINAQYLDELEQVLSLDPRPAYQEDPERVYKMKFSNFDIHFKVNGNVITVVDMVKDTSLV

Sequences:

>Translated_231_residues
MCSPFREKFGIPRQPNLVNIESYIEMVEPYNDLLAFEGIEQFSHLWLIWQFHDNKNQETATKFRPQVRPPRLGGNEKIGV
FATRSMYRPAPIGLSVVRLNKVEKVGKSLRVYVTGSDLLNGTPILDIKPYIQYSDAIVDAQSGYAQAEPERKSVLWSENA
LSTQQSLFKNKEINAQYLDELEQVLSLDPRPAYQEDPERVYKMKFSNFDIHFKVNGNVITVVDMVKDTSLV
>Mature_231_residues
MCSPFREKFGIPRQPNLVNIESYIEMVEPYNDLLAFEGIEQFSHLWLIWQFHDNKNQETATKFRPQVRPPRLGGNEKIGV
FATRSMYRPAPIGLSVVRLNKVEKVGKSLRVYVTGSDLLNGTPILDIKPYIQYSDAIVDAQSGYAQAEPERKSVLWSENA
LSTQQSLFKNKEINAQYLDELEQVLSLDPRPAYQEDPERVYKMKFSNFDIHFKVNGNVITVVDMVKDTSLV

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=140, Percent_Identity=40.7142857142857, Blast_Score=103, Evalue=2e-22,
Organism=Escherichia coli, GI1786393, Length=220, Percent_Identity=39.0909090909091, Blast_Score=163, Evalue=8e-42,
Organism=Drosophila melanogaster, GI45552503, Length=159, Percent_Identity=41.5094339622642, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24586408, Length=140, Percent_Identity=44.2857142857143, Blast_Score=110, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 26533; Mature: 26533

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSPFREKFGIPRQPNLVNIESYIEMVEPYNDLLAFEGIEQFSHLWLIWQFHDNKNQETA
CCCCCHHHCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEEEECCCCCHHH
TKFRPQVRPPRLGGNEKIGVFATRSMYRPAPIGLSVVRLNKVEKVGKSLRVYVTGSDLLN
HHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEHHHHHHCCCEEEEEEECCCCCC
GTPILDIKPYIQYSDAIVDAQSGYAQAEPERKSVLWSENALSTQQSLFKNKEINAQYLDE
CCCEEEECCCEEECCCEEECCCCCCCCCCCHHHEEECCCHHHHHHHHHHCCCCCHHHHHH
LEQVLSLDPRPAYQEDPERVYKMKFSNFDIHFKVNGNVITVVDMVKDTSLV
HHHHHCCCCCCCCCCCHHHHHEEEECCEEEEEEECCCEEEEEEECCCCCCC
>Mature Secondary Structure
MCSPFREKFGIPRQPNLVNIESYIEMVEPYNDLLAFEGIEQFSHLWLIWQFHDNKNQETA
CCCCCHHHCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEEEECCCCCHHH
TKFRPQVRPPRLGGNEKIGVFATRSMYRPAPIGLSVVRLNKVEKVGKSLRVYVTGSDLLN
HHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEHHHHHHCCCEEEEEEECCCCCC
GTPILDIKPYIQYSDAIVDAQSGYAQAEPERKSVLWSENALSTQQSLFKNKEINAQYLDE
CCCEEEECCCEEECCCEEECCCCCCCCCCCHHHEEECCCHHHHHHHHHHCCCCCHHHHHH
LEQVLSLDPRPAYQEDPERVYKMKFSNFDIHFKVNGNVITVVDMVKDTSLV
HHHHHCCCCCCCCCCCHHHHHEEEECCEEEEEEECCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]