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The map label for this gene is oxyR [H]

Identifier: 213158641

GI number: 213158641

Start: 2686573

End: 2687490

Strand: Direct

Name: oxyR [H]

Synonym: AB57_2595

Alternate gene names: 213158641

Gene position: 2686573-2687490 (Clockwise)

Preceding gene: 213158637

Following gene: 213158644

Centisome position: 66.33

GC content: 37.15

Gene sequence:

>918_bases
ATGAAACCTAAAAAATTAAATCAAGTTACTGATTTTGATATAAAACTTCTCAAAATTTTTAAAACGGTTTGCGACTGTCA
TAGCTTTACATCTGCCGAAAGTATTTTAGGTATTAGCCGCTCTGCAATTAGTTTGCATATGAGTGATTTAGAAAATCGTC
TGGGCATTCGGCTGTGCCAACGTGGCCGTGCCGGCTTTGCCCTGACCGATGAAGGACGGGAAATTTTAGAATATATCGAA
GTGCTTACGGCAGCGATTGAAGACTTCCGTTCTAAAGTTAACCAAATGCATAACCGCCTTAAAGGTGAATTTAATATCGG
AATTATTAACAACCTTGTAACTATGCCTAGAGGCTATATCACCAACACCTTGACACAACTTGCCGAGGAACACGCCGGGG
TTATTATTAATATCAGTATGAGCACCCTTTCAGATATTGAGTGCCGTGTACTTGATAACCGTTTGCATGCAGGCGTTATC
CCCCTTGTTACGCCTTTGTCCGGTTTAGACTATTTTGATTTATATAGTGAAAGTTCATTTTTATATTGCGGCAAAAATCA
TCCTTTATTTAACCAATGTAGCAACATTAATTTAAATGAATTAAAAAAATGGCAAGCCATTCTTCCTAATTATGCGATTA
CCTCGGAAGCAGCCAAGTTGCATCAGCTTTTAGATTGTAAAGCGACGGCAAGTGACCGCGAAGGTATTGCCTTTCTCATT
TTAACCGGAAAATTTTTAGGTTTTTTACCCGACCACTATGCAAAAAAATGGGTTGAAGACGGTGTTATGCAACCTGTTTT
AAAAGATAAAATGCACTACAGCACTCCTATATGCTTAATTACTCATAAGGGTAAAAATCACAATAATATTTTAAAAACCT
TTATGGAAATGCTTGAGAAGCGAATAGATAACAATTAA

Upstream 100 bases:

>100_bases
CATTCCTGTTTATTTTCAAATTATGGTTTGAGTGTACATAGCGAGATAAGTTTGATAAATTCAAATTATCTTGAGTTTAG
ATTTAAAAAAACAAAACTAA

Downstream 100 bases:

>100_bases
AGGTAGGTACTGATATTGAAATAAAAAGCTCCACAAAAGGAGCTTTTTTAGAATCTTGGCAGAGGATCAAGGACTCGAAC
CTTGACGAACGGTTTTGGAG

Product: transcriptional regulator, LysR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKPKKLNQVTDFDIKLLKIFKTVCDCHSFTSAESILGISRSAISLHMSDLENRLGIRLCQRGRAGFALTDEGREILEYIE
VLTAAIEDFRSKVNQMHNRLKGEFNIGIINNLVTMPRGYITNTLTQLAEEHAGVIINISMSTLSDIECRVLDNRLHAGVI
PLVTPLSGLDYFDLYSESSFLYCGKNHPLFNQCSNINLNELKKWQAILPNYAITSEAAKLHQLLDCKATASDREGIAFLI
LTGKFLGFLPDHYAKKWVEDGVMQPVLKDKMHYSTPICLITHKGKNHNNILKTFMEMLEKRIDNN

Sequences:

>Translated_305_residues
MKPKKLNQVTDFDIKLLKIFKTVCDCHSFTSAESILGISRSAISLHMSDLENRLGIRLCQRGRAGFALTDEGREILEYIE
VLTAAIEDFRSKVNQMHNRLKGEFNIGIINNLVTMPRGYITNTLTQLAEEHAGVIINISMSTLSDIECRVLDNRLHAGVI
PLVTPLSGLDYFDLYSESSFLYCGKNHPLFNQCSNINLNELKKWQAILPNYAITSEAAKLHQLLDCKATASDREGIAFLI
LTGKFLGFLPDHYAKKWVEDGVMQPVLKDKMHYSTPICLITHKGKNHNNILKTFMEMLEKRIDNN
>Mature_305_residues
MKPKKLNQVTDFDIKLLKIFKTVCDCHSFTSAESILGISRSAISLHMSDLENRLGIRLCQRGRAGFALTDEGREILEYIE
VLTAAIEDFRSKVNQMHNRLKGEFNIGIINNLVTMPRGYITNTLTQLAEEHAGVIINISMSTLSDIECRVLDNRLHAGVI
PLVTPLSGLDYFDLYSESSFLYCGKNHPLFNQCSNINLNELKKWQAILPNYAITSEAAKLHQLLDCKATASDREGIAFLI
LTGKFLGFLPDHYAKKWVEDGVMQPVLKDKMHYSTPICLITHKGKNHNNILKTFMEMLEKRIDNN

Specific function: Required for the induction the katG gene for catalase. Involved in the response to hydrogen peroxide [H]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34532; Mature: 34532

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKKLNQVTDFDIKLLKIFKTVCDCHSFTSAESILGISRSAISLHMSDLENRLGIRLCQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
RGRAGFALTDEGREILEYIEVLTAAIEDFRSKVNQMHNRLKGEFNIGIINNLVTMPRGYI
CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCHHH
TNTLTQLAEEHAGVIINISMSTLSDIECRVLDNRLHAGVIPLVTPLSGLDYFDLYSESSF
HHHHHHHHHHHCCEEEEEEHHHHCCCHHHHHHCHHHCCHHHHHCCCCCCCHHHHHCCCCE
LYCGKNHPLFNQCSNINLNELKKWQAILPNYAITSEAAKLHQLLDCKATASDREGIAFLI
EEECCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
LTGKFLGFLPDHYAKKWVEDGVMQPVLKDKMHYSTPICLITHKGKNHNNILKTFMEMLEK
EHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH
RIDNN
HHCCC
>Mature Secondary Structure
MKPKKLNQVTDFDIKLLKIFKTVCDCHSFTSAESILGISRSAISLHMSDLENRLGIRLCQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
RGRAGFALTDEGREILEYIEVLTAAIEDFRSKVNQMHNRLKGEFNIGIINNLVTMPRGYI
CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCHHH
TNTLTQLAEEHAGVIINISMSTLSDIECRVLDNRLHAGVIPLVTPLSGLDYFDLYSESSF
HHHHHHHHHHHCCEEEEEEHHHHCCCHHHHHHCHHHCCHHHHHCCCCCCCHHHHHCCCCE
LYCGKNHPLFNQCSNINLNELKKWQAILPNYAITSEAAKLHQLLDCKATASDREGIAFLI
EEECCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
LTGKFLGFLPDHYAKKWVEDGVMQPVLKDKMHYSTPICLITHKGKNHNNILKTFMEMLEK
EHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH
RIDNN
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9733688 [H]