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The map label for this gene is blc [H]

Identifier: 213158595

GI number: 213158595

Start: 2643791

End: 2644354

Strand: Reverse

Name: blc [H]

Synonym: AB57_2549

Alternate gene names: 213158595

Gene position: 2644354-2643791 (Counterclockwise)

Preceding gene: 213158596

Following gene: 213158594

Centisome position: 65.28

GC content: 38.3

Gene sequence:

>564_bases
ATGAAACTATTATTTAAATCACTTGTCATCAGCAGTAGCCTTGCAGCGGTCAGTTTAATGCTTCCTTTGAGCACCTTTGC
AGACACCAATACTAAACCTGTCGCTGTTGATTCTATTGATATTAATAAATACGCAGGTAAGTGGTATGAAATTGCGCATT
TACCGATGTTTTTTCAGCGTAATTGTGTAGCAAATACAACTGCAAACTATTCTATTAACGCGGACAAAACCGTTGGTGTT
TTAAATAGCTGTACGACAAAAAAAGGCGAAATGATCTCATCTGAAGGAGTTGCTTATCCGCAAAATGAAGGCAACAGTAA
ATTGAAGGTGAGCTTTTTACCTTCTGGTCTTAGATGGATTCCTTTTACAAAAGGCGATTACTGGGTTTTAAGAGTTGACC
CAAATTATCAGGTCGCTTTAGTGGGTGGTCCAAGCCATAAATATTTATGGATTCTTTCTCGTAGCCCTCAACTTGATGAG
GCGACATATCAATCTTATCTGCAAACCGCGAAAAGCTATGGCTACGACGTTTCTAAACTCGTTAAAACAACACAATCTAA
ATAG

Upstream 100 bases:

>100_bases
TTAAATCCTTATTAATGTTGCTTAATTTTTAAAATTCACACTTTGTTCACAGCCCTCTGACGTATGTTTAAACGTATGAA
ATAAACAGAAGAGGGCAATC

Downstream 100 bases:

>100_bases
TGAAATTCTGGTTGCGTAGATGCTTATATTTATCTCGTAACCGAGTGAACTTCACATAAAATTCATTGCGCATTTTCTAA
ATTAGAACCAAAAGAAATGC

Product: lipocalin family protein

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKLLFKSLVISSSLAAVSLMLPLSTFADTNTKPVAVDSIDINKYAGKWYEIAHLPMFFQRNCVANTTANYSINADKTVGV
LNSCTTKKGEMISSEGVAYPQNEGNSKLKVSFLPSGLRWIPFTKGDYWVLRVDPNYQVALVGGPSHKYLWILSRSPQLDE
ATYQSYLQTAKSYGYDVSKLVKTTQSK

Sequences:

>Translated_187_residues
MKLLFKSLVISSSLAAVSLMLPLSTFADTNTKPVAVDSIDINKYAGKWYEIAHLPMFFQRNCVANTTANYSINADKTVGV
LNSCTTKKGEMISSEGVAYPQNEGNSKLKVSFLPSGLRWIPFTKGDYWVLRVDPNYQVALVGGPSHKYLWILSRSPQLDE
ATYQSYLQTAKSYGYDVSKLVKTTQSK
>Mature_187_residues
MKLLFKSLVISSSLAAVSLMLPLSTFADTNTKPVAVDSIDINKYAGKWYEIAHLPMFFQRNCVANTTANYSINADKTVGV
LNSCTTKKGEMISSEGVAYPQNEGNSKLKVSFLPSGLRWIPFTKGDYWVLRVDPNYQVALVGGPSHKYLWILSRSPQLDE
ATYQSYLQTAKSYGYDVSKLVKTTQSK

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=159, Percent_Identity=32.7044025157233, Blast_Score=68, Evalue=6e-12,
Organism=Escherichia coli, GI1790592, Length=174, Percent_Identity=36.2068965517241, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 20780; Mature: 20780

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLFKSLVISSSLAAVSLMLPLSTFADTNTKPVAVDSIDINKYAGKWYEIAHLPMFFQR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHC
NCVANTTANYSINADKTVGVLNSCTTKKGEMISSEGVAYPQNEGNSKLKVSFLPSGLRWI
CCCCCCCCCEEECCCCCEEHHHCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCEEE
PFTKGDYWVLRVDPNYQVALVGGPSHKYLWILSRSPQLDEATYQSYLQTAKSYGYDVSKL
EECCCCEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHH
VKTTQSK
HHHHCCC
>Mature Secondary Structure
MKLLFKSLVISSSLAAVSLMLPLSTFADTNTKPVAVDSIDINKYAGKWYEIAHLPMFFQR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHC
NCVANTTANYSINADKTVGVLNSCTTKKGEMISSEGVAYPQNEGNSKLKVSFLPSGLRWI
CCCCCCCCCEEECCCCCEEHHHCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCEEE
PFTKGDYWVLRVDPNYQVALVGGPSHKYLWILSRSPQLDEATYQSYLQTAKSYGYDVSKL
EECCCCEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHH
VKTTQSK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]