Click here to switch to the map view.

The map label for this gene is ygeA [H]

Identifier: 213158584

GI number: 213158584

Start: 2632937

End: 2633665

Strand: Reverse

Name: ygeA [H]

Synonym: AB57_2538

Alternate gene names: 213158584

Gene position: 2633665-2632937 (Counterclockwise)

Preceding gene: 213158588

Following gene: 213158582

Centisome position: 65.02

GC content: 39.23

Gene sequence:

>729_bases
ATGAAAACAATTGGTTTACTCGGCGGCATGAGCTGGGAGTCTACAGCACTTTACTATCAACAAATTAATAGAATGGTTCA
GAACAAGTTAGGGAAACTACATTCAGCCAAAATCATTCTAAATAGTGTCGATTTTGAAGAAATAGCAGCATTACAATCGA
AAGGTTTGTGGCAAGAAGCTGGAGCCTACTTAGCTGAGCAAGCACAAAATTTAGAAAAAGCAGGGGCAGATTGTATTTTA
GTCTGTACTAATACCATGCATAAAGTAGCGCCTCAAATTGAAGATGCCATTACGGTTCCATTTATACATATTGCCGATGC
CACAGCAAAAGAAATTTTAAGTCAAAATATCCGAAAAGTTGCACTGTTGGGAACCGCTTTCACCATGGAGCAAGACTTTT
ATAAAGCCAGATTACAAGATCGTGGAATTGAGGTGATTATTCCAAATGATGCAAATCGGAAAATAGTACATAGCATTATC
TATGACGAGCTTTGTTTAGGTGTGATCAACCCCGATTCGCAACACAAATACACGACCATTGTTGAAGAGTTGATTGGGCA
GGGTGCCGAGGGCATTATTTTGGGGTGTACCGAAATTTGTATGTTGATTGGTGATATCAAATTTTCTGTGCCTCTATTTG
ATACCACCACCATTCATGCGAAAGAAGCTGTAAATTTTGCATTAGAGCAAAAAACGGCAGCCCGTTCTATTGCTGCTAGT
TCGGTATAA

Upstream 100 bases:

>100_bases
AAGATGAATAATAATTTAATAAAGAGAGCAATTTTATTCTAGCTGTCTATTTATCTAAGAAGATATAGATAAGCTTTAGG
TTCAGCAAAAGGTTTAAATA

Downstream 100 bases:

>100_bases
ATACTCATCAGCTTTTAATTTATTCTGAAATACGAACGAATCACAGCCCAATTTGTTGAAAGCCAGCAGATAAGTGAACC
CGCCGTGACCATGGCTGTAC

Product: aspartate racemase

Products: D-aspartate

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKTIGLLGGMSWESTALYYQQINRMVQNKLGKLHSAKIILNSVDFEEIAALQSKGLWQEAGAYLAEQAQNLEKAGADCIL
VCTNTMHKVAPQIEDAITVPFIHIADATAKEILSQNIRKVALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSII
YDELCLGVINPDSQHKYTTIVEELIGQGAEGIILGCTEICMLIGDIKFSVPLFDTTTIHAKEAVNFALEQKTAARSIAAS
SV

Sequences:

>Translated_242_residues
MKTIGLLGGMSWESTALYYQQINRMVQNKLGKLHSAKIILNSVDFEEIAALQSKGLWQEAGAYLAEQAQNLEKAGADCIL
VCTNTMHKVAPQIEDAITVPFIHIADATAKEILSQNIRKVALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSII
YDELCLGVINPDSQHKYTTIVEELIGQGAEGIILGCTEICMLIGDIKFSVPLFDTTTIHAKEAVNFALEQKTAARSIAAS
SV
>Mature_242_residues
MKTIGLLGGMSWESTALYYQQINRMVQNKLGKLHSAKIILNSVDFEEIAALQSKGLWQEAGAYLAEQAQNLEKAGADCIL
VCTNTMHKVAPQIEDAITVPFIHIADATAKEILSQNIRKVALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSII
YDELCLGVINPDSQHKYTTIVEELIGQGAEGIILGCTEICMLIGDIKFSVPLFDTTTIHAKEAVNFALEQKTAARSIAAS
SV

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=229, Percent_Identity=50.6550218340611, Blast_Score=239, Evalue=9e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: 5.1.1.13

Molecular weight: Translated: 26550; Mature: 26550

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS00923 ASP_GLU_RACEMASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIGLLGGMSWESTALYYQQINRMVQNKLGKLHSAKIILNSVDFEEIAALQSKGLWQEA
CCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCHHHHHHHHHCCCHHHH
GAYLAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADATAKEILSQNIRKV
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH
ALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSIIYDELCLGVINPDSQHKYTTI
HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
VEELIGQGAEGIILGCTEICMLIGDIKFSVPLFDTTTIHAKEAVNFALEQKTAARSIAAS
HHHHHCCCCCEEEEEHHHHHHHHHCCEEECEECCCCEEHHHHHHHHHHHHHHHHHHHHHC
SV
CC
>Mature Secondary Structure
MKTIGLLGGMSWESTALYYQQINRMVQNKLGKLHSAKIILNSVDFEEIAALQSKGLWQEA
CCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCHHHHHHHHHCCCHHHH
GAYLAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADATAKEILSQNIRKV
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH
ALLGTAFTMEQDFYKARLQDRGIEVIIPNDANRKIVHSIIYDELCLGVINPDSQHKYTTI
HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
VEELIGQGAEGIILGCTEICMLIGDIKFSVPLFDTTTIHAKEAVNFALEQKTAARSIAAS
HHHHHCCCCCEEEEEHHHHHHHHHCCEEECEECCCCEEHHHHHHHHHHHHHHHHHHHHHC
SV
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate

Specific reaction: L-aspartate = D-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]