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The map label for this gene is yedU [C]

Identifier: 213158537

GI number: 213158537

Start: 2583279

End: 2584097

Strand: Reverse

Name: yedU [C]

Synonym: AB57_2489

Alternate gene names: 213158537

Gene position: 2584097-2583279 (Counterclockwise)

Preceding gene: 213158543

Following gene: 213158536

Centisome position: 63.8

GC content: 37.73

Gene sequence:

>819_bases
ATGTTTGCAATGATTGCAGCTTCGGCAGCATTAAGTGCAAATGCCGCTCATGTATTGGTTGTATTGTCTGATGAAGGACA
GTTAGAGCTAAAGAATAAGCAGGTTTTTAAAACGGGCTTTTATCTTAATGAGTTGATGCAGCCTACAAAAATGCTTTTAG
ATGCAGGGCATACCGTAACATTTGCCACTCCAAAGGGGAAAGCTCCAACGTTAGATGAGTCATCAAATAATGCAATGTAT
TTTAATCAAGATGAAAAAGCATTAAAGCAGTATGCTGGTTTATTACATGATCTAAAGTTAACTTCTGCTCAAGATTCTCC
TGTTGTAAGTCTGGCGCGTATTGAGCAAATTGGTATAGATCAATTTGATGCTATTTATATTCCAGGCGGACATGCGCCTA
TGCAAGACCTATTAAAAGATAAACAGCTTGGTAAAGTTCTCACGGCTTTTCATAATGCAGGAAAGCCTACAGCTTTGGTT
TGTCATGGTCCTATAGCCCTGATGTCAACTTTACCTCATGCTGCGGAAGCCGTTAAGCAATTTGAACAAGGTAAAAAAGT
TAAAACTGGAGAATGGATTTATAAAAATTATCAGATGACAGTAATTAGCAATCAAGAAGAAGAGCAAGCGAAGAGCTTAT
TAAAAGGTGGTGAGATGAAGTTCTATCCACAAACTGCATTAGAGTCACTTGGAGCAAAATATCAAAGCAATACGAAAGCT
TGGTCGCCAAATGTAGTGGTGGATCGTGAACTTATTACTGGACAAAATCCAGCTTCGGCTGTTCTTGTCGGTAAATCTTT
ATTAGAAAAATTAAAATAA

Upstream 100 bases:

>100_bases
TTTTCTACCTCTGGGGTAAAAATAGAATATATCCATCCCAGTTATAAATCCAGCAAATGCTTGGAATGAAGGTCGAATAA
TGAAGAAGTTAAATCAAATA

Downstream 100 bases:

>100_bases
CTATAGCAGTTAAAGAGGCTTTATAAATAAAGTCTCTTTTATTATATGGATTTGGAAGTTAACGTTTTAAAGGATTACAT
ATGTTATTTAATCGGCATAA

Product: ThiJ/PfpI domain protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; DJ-1/PfpI Family; NonF-Related Protein; Transcriptional Regulator; Amidotransferase; DJ-1/PfpI-Family Transcriptional Regulator; Peptidase; DJ-1/PfpI Family Transcriptional Regulator; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase-Like Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; DJ-1/PfpI/ThiJ Superfamily Protein; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; Type 1 Glutamine Amidotransferase; ThiJ Protein; NonF Protein; ThiJ/PfpI Family Intracellular Protease; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Chaperone HchA; Chaperone; Transcriptional Regulator Fis Family; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Chaperone Protein HchA; Protease/Amidase; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MFAMIAASAALSANAAHVLVVLSDEGQLELKNKQVFKTGFYLNELMQPTKMLLDAGHTVTFATPKGKAPTLDESSNNAMY
FNQDEKALKQYAGLLHDLKLTSAQDSPVVSLARIEQIGIDQFDAIYIPGGHAPMQDLLKDKQLGKVLTAFHNAGKPTALV
CHGPIALMSTLPHAAEAVKQFEQGKKVKTGEWIYKNYQMTVISNQEEEQAKSLLKGGEMKFYPQTALESLGAKYQSNTKA
WSPNVVVDRELITGQNPASAVLVGKSLLEKLK

Sequences:

>Translated_272_residues
MFAMIAASAALSANAAHVLVVLSDEGQLELKNKQVFKTGFYLNELMQPTKMLLDAGHTVTFATPKGKAPTLDESSNNAMY
FNQDEKALKQYAGLLHDLKLTSAQDSPVVSLARIEQIGIDQFDAIYIPGGHAPMQDLLKDKQLGKVLTAFHNAGKPTALV
CHGPIALMSTLPHAAEAVKQFEQGKKVKTGEWIYKNYQMTVISNQEEEQAKSLLKGGEMKFYPQTALESLGAKYQSNTKA
WSPNVVVDRELITGQNPASAVLVGKSLLEKLK
>Mature_272_residues
MFAMIAASAALSANAAHVLVVLSDEGQLELKNKQVFKTGFYLNELMQPTKMLLDAGHTVTFATPKGKAPTLDESSNNAMY
FNQDEKALKQYAGLLHDLKLTSAQDSPVVSLARIEQIGIDQFDAIYIPGGHAPMQDLLKDKQLGKVLTAFHNAGKPTALV
CHGPIALMSTLPHAAEAVKQFEQGKKVKTGEWIYKNYQMTVISNQEEEQAKSLLKGGEMKFYPQTALESLGAKYQSNTKA
WSPNVVVDRELITGQNPASAVLVGKSLLEKLK

Specific function: Not Known. [C]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29660; Mature: 29660

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAMIAASAALSANAAHVLVVLSDEGQLELKNKQVFKTGFYLNELMQPTKMLLDAGHTVT
CCEEEEHHHHHCCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
FATPKGKAPTLDESSNNAMYFNQDEKALKQYAGLLHDLKLTSAQDSPVVSLARIEQIGID
EECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC
QFDAIYIPGGHAPMQDLLKDKQLGKVLTAFHNAGKPTALVCHGPIALMSTLPHAAEAVKQ
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCHHHHHHHH
FEQGKKVKTGEWIYKNYQMTVISNQEEEQAKSLLKGGEMKFYPQTALESLGAKYQSNTKA
HHCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCEEECHHHHHHHHCCHHCCCCCC
WSPNVVVDRELITGQNPASAVLVGKSLLEKLK
CCCCEEEEHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFAMIAASAALSANAAHVLVVLSDEGQLELKNKQVFKTGFYLNELMQPTKMLLDAGHTVT
CCEEEEHHHHHCCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
FATPKGKAPTLDESSNNAMYFNQDEKALKQYAGLLHDLKLTSAQDSPVVSLARIEQIGID
EECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC
QFDAIYIPGGHAPMQDLLKDKQLGKVLTAFHNAGKPTALVCHGPIALMSTLPHAAEAVKQ
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCHHHHHHHH
FEQGKKVKTGEWIYKNYQMTVISNQEEEQAKSLLKGGEMKFYPQTALESLGAKYQSNTKA
HHCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCEEECHHHHHHHHCCHHCCCCCC
WSPNVVVDRELITGQNPASAVLVGKSLLEKLK
CCCCEEEEHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA