| Definition | Acinetobacter baumannii AB0057, complete genome. |
|---|---|
| Accession | NC_011586 |
| Length | 4,050,513 |
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The map label for this gene is kdpD [H]
Identifier: 213158520
GI number: 213158520
Start: 2563096
End: 2565750
Strand: Reverse
Name: kdpD [H]
Synonym: AB57_2471
Alternate gene names: 213158520
Gene position: 2565750-2563096 (Counterclockwise)
Preceding gene: 213158521
Following gene: 213158519
Centisome position: 63.34
GC content: 40.04
Gene sequence:
>2655_bases GTGCAAAGCAATCGCGAAAATCAGGCTGAGGCCTTATTAAATCATGTTAATAGATATCAAGCCGGTCGACTAACGGTCTT TCTTGGTGCGGCACCAGGTGTAGGAAAAACCTATGCCATGCTCGCCCGCGCTAAAGAACTATTTCAACAGGGCACAGATG TTGTTGTTGGTATTGTTGAAACCCACGGAAGAATTGAAACTCTAAAAATTTTGGAAGGGTTGCCTCAAATTGCTAGAAAG GAAATGCAATATCAGGGGCATACTTTAGAAGAAATGGACTTGGATGCTATTTTACTTAGGCATCCGCAAATCGTTTTAGT TGATGAACTGGCTCATCGCAACGTCCCAAATAGTCGCCATGAACGACGTTGGCAAGACGTCAATGAATTGCTAGACGCAG GTATTGATGTATTTACCACTATAAATATTCAACATTTAGAAAGCTTAAATGATGTGGTGTACCAGATTACGGGAATCCGA GTAAATGAAACGGTACCAGATCGGGTATTTGACCGTATTCGGGACATTCGCTTAATTGATTTACCCGTCAGTGAACTCAT TGAAAGGCTCCATCAAGGAAAAGTCTATGTACCAGAGCAAGCAAATCTGGCATTACAAGGCTTTTTTAGCATTTCAAATT TAACAGCATTACGTGAACTCGCAATGCAATGCGTTGCTGAGCATGTCGATTCAGACTTAAAAGAGAGTTATGCCTCAAAG GGATTGAAATCTATCTCGTTGCAAAATGAATTGATGATTGCGATAGATGGGCAGGGCTCTTCTGAATATTTAGTGCGAGC AGGCTGTCGTTTAGCAGAACGTAATGGTGCTACATGGACTGTAGTGAATGTTGCTAAAAGTTCGGACTTTGGACAGAGTT CAGCGAATTCTTATAAAAAAGAATACATCGAGATTGACCGTGCATTTGAGCTGGCTCGGCAACTCGGTGGTCGAACCGAG GTTTTATATGGGCCGCGAGTTGCTTCAGTGTTAATGGATGCCGCGATTGACCGAGGTATTTCCAATCTGGTTATTGGTAA AAGTATTTCACCGTGGTGGTTAAAGTTATTTAAGAAAAATTTAGCTCAGCAATTATTAAATCAAGAAAACTCGATTGCTT TAACCATTTTGCACCCAGAACAGGGCACTAAAAAGATTAATCAGCTCGAAAAACCTTCATTTTTATCATTAAAAGAAAGT GTTTTTGTTTTAGCTGTTACATGCGCAAGTATTTTTATAGCTCACTTCGCAGAAGTTCTATTTGGTATTGAAGACTTCTC TGTCATTTTTATTATTTCTGTTTTAATTGTTGCAACTAAGACCCGAATGCTCGCTGCAGTAGTGGCTGCTCTTATTTGTT TCTTAGCCTATAATTTTTTCTTTATTGCCCCGCGTTATACCTTTCAGATTTCAGCACACCAAGGGGTAGTCACCGTTGTT GCTTTTTTTGCAGCAGCTTTAATTGCTGGCCGTTTAGCTTCTCAGTTACGCCAGCAAGTTTTGTCTTTAAAAGCTGCGAA TGCCTACACTACGGTAATGCAAGACTTGGCGCGTAAGCTTTCTAGCGCAGTAAACCTTGAAGAAGTCATGCAAACAGGAC GTATGACTTTAGAAACACAACTTCAAACTAAAGTGTGGATTTCTATTCGAGATAAAATAATTTCATCTGATATTGAGCTA AATGATAAAGAAAAAGTAGCTGCAGAATGGTGTTTGAAACATCAGCAGCCATGCGGGCGTTTTACCGATACGCTGAGTCA ATCAAACTGGTGGTTTTTACCTCTTTTAGAGCAGAAAAATAGCCTAGGTATTGTGGGAATTTACTTTAAGGATGAAGTGG TTTCCTTAAATTTTGAGCAAAAGAAATTGACTGAAAGTGTAATTGAGTACATTGCACAGGCAGCACTTCGAACCCAATTG GTCAATGAGCTAGAACAAGCAAAAGTCACCAGTGAAACAGAGCGCTTACGTTCTGCTTTATTATCTTCGGTATCGCATGA TTTACGCTCGCCACTCGCTTCTATTATTGGGGCAGCAGACACACTTGCCAATTTTAAAGCTGAAATGACAGAACAAGACC AACAAGATCTGCTTGAAACAATTCATTTAGAAGGTGAGCGCTTAGACCGTTATATTCAAAACTTGCTTGATATGACCCGT TTGGGACACGAAGGTCTAACTTTAAAAAGAGTCTGGATTGGTGTAGATGAATTAATTGGTTCGGCAACCCGCCGTTTAAA GCGTTATAAACCAGATACACAAGTGGCCGTTCAGTTACCTGAGCAACCAATTAGTTTGTATGTTCACCCGGCACTGGTAG AACAAGCTATTTTTAATGTTTTAGAAAATGCCGCAAACTTTTCACCTCCAGATGAACCAGTCATGATTCGTACTCATCTT GTGTCAGAAGATGAGGTGAAAATAGAAATTGAAGATAAAGGTGCTGGAATCCCCGAAGACCAAAGACATCGCATTTTCGA TATGTTTTATACTATGGAGCGTGGAGACCGTGGAAAATTCGGTACAGGTTTAGGGCTAACAATTGTAAAAGCGATTATTG GTGCTCATATGGGTACAATAGAAGCATTTTCAGGGCGCCAAAATAAAGGTACTTTAATTCAAATCAAATTACCCCTTCAT CCAGTAAAAGAATAA
Upstream 100 bases:
>100_bases AAGCTCGTGTTAATGTATTAGAGCTAAATATCGCTTTAGATCAATTACAATCTACACATTAACTTAAAAATAAAGTTGTT AGTTTACCGGATGATATCAA
Downstream 100 bases:
>100_bases GTTGTAAATTCATGATAAGTTCAGAAACATCACCTGTAGAAACACGTATTGTGATTATTGATGATGAGCCTCAAATCCGT AAATTTTTAGACATTGCTTT
Product: two-component system sensor protein KdpD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 884; Mature: 884
Protein sequence:
>884_residues MQSNRENQAEALLNHVNRYQAGRLTVFLGAAPGVGKTYAMLARAKELFQQGTDVVVGIVETHGRIETLKILEGLPQIARK EMQYQGHTLEEMDLDAILLRHPQIVLVDELAHRNVPNSRHERRWQDVNELLDAGIDVFTTINIQHLESLNDVVYQITGIR VNETVPDRVFDRIRDIRLIDLPVSELIERLHQGKVYVPEQANLALQGFFSISNLTALRELAMQCVAEHVDSDLKESYASK GLKSISLQNELMIAIDGQGSSEYLVRAGCRLAERNGATWTVVNVAKSSDFGQSSANSYKKEYIEIDRAFELARQLGGRTE VLYGPRVASVLMDAAIDRGISNLVIGKSISPWWLKLFKKNLAQQLLNQENSIALTILHPEQGTKKINQLEKPSFLSLKES VFVLAVTCASIFIAHFAEVLFGIEDFSVIFIISVLIVATKTRMLAAVVAALICFLAYNFFFIAPRYTFQISAHQGVVTVV AFFAAALIAGRLASQLRQQVLSLKAANAYTTVMQDLARKLSSAVNLEEVMQTGRMTLETQLQTKVWISIRDKIISSDIEL NDKEKVAAEWCLKHQQPCGRFTDTLSQSNWWFLPLLEQKNSLGIVGIYFKDEVVSLNFEQKKLTESVIEYIAQAALRTQL VNELEQAKVTSETERLRSALLSSVSHDLRSPLASIIGAADTLANFKAEMTEQDQQDLLETIHLEGERLDRYIQNLLDMTR LGHEGLTLKRVWIGVDELIGSATRRLKRYKPDTQVAVQLPEQPISLYVHPALVEQAIFNVLENAANFSPPDEPVMIRTHL VSEDEVKIEIEDKGAGIPEDQRHRIFDMFYTMERGDRGKFGTGLGLTIVKAIIGAHMGTIEAFSGRQNKGTLIQIKLPLH PVKE
Sequences:
>Translated_884_residues MQSNRENQAEALLNHVNRYQAGRLTVFLGAAPGVGKTYAMLARAKELFQQGTDVVVGIVETHGRIETLKILEGLPQIARK EMQYQGHTLEEMDLDAILLRHPQIVLVDELAHRNVPNSRHERRWQDVNELLDAGIDVFTTINIQHLESLNDVVYQITGIR VNETVPDRVFDRIRDIRLIDLPVSELIERLHQGKVYVPEQANLALQGFFSISNLTALRELAMQCVAEHVDSDLKESYASK GLKSISLQNELMIAIDGQGSSEYLVRAGCRLAERNGATWTVVNVAKSSDFGQSSANSYKKEYIEIDRAFELARQLGGRTE VLYGPRVASVLMDAAIDRGISNLVIGKSISPWWLKLFKKNLAQQLLNQENSIALTILHPEQGTKKINQLEKPSFLSLKES VFVLAVTCASIFIAHFAEVLFGIEDFSVIFIISVLIVATKTRMLAAVVAALICFLAYNFFFIAPRYTFQISAHQGVVTVV AFFAAALIAGRLASQLRQQVLSLKAANAYTTVMQDLARKLSSAVNLEEVMQTGRMTLETQLQTKVWISIRDKIISSDIEL NDKEKVAAEWCLKHQQPCGRFTDTLSQSNWWFLPLLEQKNSLGIVGIYFKDEVVSLNFEQKKLTESVIEYIAQAALRTQL VNELEQAKVTSETERLRSALLSSVSHDLRSPLASIIGAADTLANFKAEMTEQDQQDLLETIHLEGERLDRYIQNLLDMTR LGHEGLTLKRVWIGVDELIGSATRRLKRYKPDTQVAVQLPEQPISLYVHPALVEQAIFNVLENAANFSPPDEPVMIRTHL VSEDEVKIEIEDKGAGIPEDQRHRIFDMFYTMERGDRGKFGTGLGLTIVKAIIGAHMGTIEAFSGRQNKGTLIQIKLPLH PVKE >Mature_884_residues MQSNRENQAEALLNHVNRYQAGRLTVFLGAAPGVGKTYAMLARAKELFQQGTDVVVGIVETHGRIETLKILEGLPQIARK EMQYQGHTLEEMDLDAILLRHPQIVLVDELAHRNVPNSRHERRWQDVNELLDAGIDVFTTINIQHLESLNDVVYQITGIR VNETVPDRVFDRIRDIRLIDLPVSELIERLHQGKVYVPEQANLALQGFFSISNLTALRELAMQCVAEHVDSDLKESYASK GLKSISLQNELMIAIDGQGSSEYLVRAGCRLAERNGATWTVVNVAKSSDFGQSSANSYKKEYIEIDRAFELARQLGGRTE VLYGPRVASVLMDAAIDRGISNLVIGKSISPWWLKLFKKNLAQQLLNQENSIALTILHPEQGTKKINQLEKPSFLSLKES VFVLAVTCASIFIAHFAEVLFGIEDFSVIFIISVLIVATKTRMLAAVVAALICFLAYNFFFIAPRYTFQISAHQGVVTVV AFFAAALIAGRLASQLRQQVLSLKAANAYTTVMQDLARKLSSAVNLEEVMQTGRMTLETQLQTKVWISIRDKIISSDIEL NDKEKVAAEWCLKHQQPCGRFTDTLSQSNWWFLPLLEQKNSLGIVGIYFKDEVVSLNFEQKKLTESVIEYIAQAALRTQL VNELEQAKVTSETERLRSALLSSVSHDLRSPLASIIGAADTLANFKAEMTEQDQQDLLETIHLEGERLDRYIQNLLDMTR LGHEGLTLKRVWIGVDELIGSATRRLKRYKPDTQVAVQLPEQPISLYVHPALVEQAIFNVLENAANFSPPDEPVMIRTHL VSEDEVKIEIEDKGAGIPEDQRHRIFDMFYTMERGDRGKFGTGLGLTIVKAIIGAHMGTIEAFSGRQNKGTLIQIKLPLH PVKE
Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon. KdpD may function as a membrane-associated protein kinase that phosphorylates kdpE in response to environmental signals [H]
COG id: COG2205
COG function: function code T; Osmosensitive K+ channel histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786912, Length=894, Percent_Identity=33.7807606263982, Blast_Score=466, Evalue=1e-132, Organism=Escherichia coli, GI1790346, Length=278, Percent_Identity=31.294964028777, Blast_Score=97, Evalue=6e-21, Organism=Escherichia coli, GI1790861, Length=251, Percent_Identity=28.2868525896414, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI145693157, Length=240, Percent_Identity=27.0833333333333, Blast_Score=85, Evalue=3e-17, Organism=Escherichia coli, GI87081816, Length=287, Percent_Identity=28.9198606271777, Blast_Score=84, Evalue=5e-17, Organism=Escherichia coli, GI1789149, Length=249, Percent_Identity=29.3172690763052, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI48994928, Length=225, Percent_Identity=26.6666666666667, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1789808, Length=233, Percent_Identity=30.0429184549356, Blast_Score=76, Evalue=1e-14, Organism=Escherichia coli, GI1788549, Length=274, Percent_Identity=25.5474452554745, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1786783, Length=224, Percent_Identity=24.1071428571429, Blast_Score=75, Evalue=3e-14, Organism=Escherichia coli, GI1788713, Length=249, Percent_Identity=23.6947791164659, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790436, Length=227, Percent_Identity=28.1938325991189, Blast_Score=70, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR003852 - InterPro: IPR006016 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF02702 KdpD; PF00582 Usp [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 99114; Mature: 99114
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSNRENQAEALLNHVNRYQAGRLTVFLGAAPGVGKTYAMLARAKELFQQGTDVVVGIVE CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEC THGRIETLKILEGLPQIARKEMQYQGHTLEEMDLDAILLRHPQIVLVDELAHRNVPNSRH CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHCCCCEEEEEHHHHCCCCCCHH ERRWQDVNELLDAGIDVFTTINIQHLESLNDVVYQITGIRVNETVPDRVFDRIRDIRLID HHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHCCEEEE LPVSELIERLHQGKVYVPEQANLALQGFFSISNLTALRELAMQCVAEHVDSDLKESYASK CCHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLKSISLQNELMIAIDGQGSSEYLVRAGCRLAERNGATWTVVNVAKSSDFGQSSANSYKK CCHHEECCCCEEEEEECCCCCHHHHHHCCHHHHCCCCEEEEEEEECCCCCCCCHHHHHHH EYIEIDRAFELARQLGGRTEVLYGPRVASVLMDAAIDRGISNLVIGKSISPWWLKLFKKN HHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHH LAQQLLNQENSIALTILHPEQGTKKINQLEKPSFLSLKESVFVLAVTCASIFIAHFAEVL HHHHHHCCCCCEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FGIEDFSVIFIISVLIVATKTRMLAAVVAALICFLAYNFFFIAPRYTFQISAHQGVVTVV HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCHHHHH AFFAAALIAGRLASQLRQQVLSLKAANAYTTVMQDLARKLSSAVNLEEVMQTGRMTLETQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEH LQTKVWISIRDKIISSDIELNDKEKVAAEWCLKHQQPCGRFTDTLSQSNWWFLPLLEQKN HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEECCCC SLGIVGIYFKDEVVSLNFEQKKLTESVIEYIAQAALRTQLVNELEQAKVTSETERLRSAL CCCEEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSVSHDLRSPLASIIGAADTLANFKAEMTEQDQQDLLETIHLEGERLDRYIQNLLDMTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH LGHEGLTLKRVWIGVDELIGSATRRLKRYKPDTQVAVQLPEQPISLYVHPALVEQAIFNV CCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECHHHHHHHHHHH LENAANFSPPDEPVMIRTHLVSEDEVKIEIEDKGAGIPEDQRHRIFDMFYTMERGDRGKF HHHHCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC GTGLGLTIVKAIIGAHMGTIEAFSGRQNKGTLIQIKLPLHPVKE CCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MQSNRENQAEALLNHVNRYQAGRLTVFLGAAPGVGKTYAMLARAKELFQQGTDVVVGIVE CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEC THGRIETLKILEGLPQIARKEMQYQGHTLEEMDLDAILLRHPQIVLVDELAHRNVPNSRH CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHCCCCEEEEEHHHHCCCCCCHH ERRWQDVNELLDAGIDVFTTINIQHLESLNDVVYQITGIRVNETVPDRVFDRIRDIRLID HHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHCCEEEE LPVSELIERLHQGKVYVPEQANLALQGFFSISNLTALRELAMQCVAEHVDSDLKESYASK CCHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLKSISLQNELMIAIDGQGSSEYLVRAGCRLAERNGATWTVVNVAKSSDFGQSSANSYKK CCHHEECCCCEEEEEECCCCCHHHHHHCCHHHHCCCCEEEEEEEECCCCCCCCHHHHHHH EYIEIDRAFELARQLGGRTEVLYGPRVASVLMDAAIDRGISNLVIGKSISPWWLKLFKKN HHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHH LAQQLLNQENSIALTILHPEQGTKKINQLEKPSFLSLKESVFVLAVTCASIFIAHFAEVL HHHHHHCCCCCEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FGIEDFSVIFIISVLIVATKTRMLAAVVAALICFLAYNFFFIAPRYTFQISAHQGVVTVV HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCHHHHH AFFAAALIAGRLASQLRQQVLSLKAANAYTTVMQDLARKLSSAVNLEEVMQTGRMTLETQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEH LQTKVWISIRDKIISSDIELNDKEKVAAEWCLKHQQPCGRFTDTLSQSNWWFLPLLEQKN HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEECCCC SLGIVGIYFKDEVVSLNFEQKKLTESVIEYIAQAALRTQLVNELEQAKVTSETERLRSAL CCCEEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSVSHDLRSPLASIIGAADTLANFKAEMTEQDQQDLLETIHLEGERLDRYIQNLLDMTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH LGHEGLTLKRVWIGVDELIGSATRRLKRYKPDTQVAVQLPEQPISLYVHPALVEQAIFNV CCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECHHHHHHHHHHH LENAANFSPPDEPVMIRTHLVSEDEVKIEIEDKGAGIPEDQRHRIFDMFYTMERGDRGKF HHHHCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC GTGLGLTIVKAIIGAHMGTIEAFSGRQNKGTLIQIKLPLHPVKE CCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1532388; 8905232; 9278503; 7499326 [H]