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The map label for this gene is samB [H]

Identifier: 213158408

GI number: 213158408

Start: 2440930

End: 2441982

Strand: Direct

Name: samB [H]

Synonym: AB57_2356

Alternate gene names: 213158408

Gene position: 2440930-2441982 (Clockwise)

Preceding gene: 213158407

Following gene: 213158409

Centisome position: 60.26

GC content: 37.7

Gene sequence:

>1053_bases
ATGAAAGATATCTCACACCGTGAAGTTTATGCACTGGTTGATATTAATAATTGCTATGTTAGCTGTGAGCGTCTTTTCAA
CCCTAAACTCAATGATAAACCTGTAGTTGTTTTATCTAATAACGATGGCTGTGTGGTCTCACGTAGTGAAGAGGCAAAAC
TTTTAGGGATTAAAATGGGCGTACCGTGGTTCCAAATTGAAAAAGATGCTTTACAAGCAGGCGTTCAAGTCTATTCAAGC
AACTACACTTTATATGCCGAGATGTCCCGCCGTTTTTTTGCTGTTCTCGGTGAGTTTTTCTCTCCAGATGATTTAGAAGC
CTACTCTATAGATGAATGCTTTATTCATCTCACCCCTTACCTCCAATCTATCGATATCTCTGACTACTGCAACAAAGTGA
GAAACACTCTCCTAAAATGGTTAGGCTTACCTTGTTGCATTGGAATTGGATATTCAAAGACACAAGCAAAACTTGCCAAT
CACTATGCTAAGAAAATTAAAAGTTTTAAAGGAGTATGTAATTTCATCACCTTAGATCCATTAATTATGGAAGACCTCAT
GCAACAGACATCAGTCAAAGAGGTATGGGGAATCGGCTATCAATTAGTCAAACAGCTACAAAGTTATGAGGTGTACACAT
GCCTAGACTTAACTTTTGCCAATGAACACCATATGGCAAAGGCATTTTCTGTGGTCATGGCACGCACCATTCGTGAGCTA
AAAGGCCAATCCTGTATTCAACTTGATGATCCAGCTATTCCAACGAAACGGATTTTAGCATCACGAAGTTTTGCTCAAGC
TTTATCCAGTATTGAGATTATTAAACAAGCACTTATCTTTCACCTTAACCGGGCACATCGCCGTTTAATGAAACAAGAAC
AACTTTGTGCCTGTGTTCAAGTTATGCTTTATGAAAAACCGACAAACCGCCCTATAAAAAAGTCACATCTCAAGCAATTG
GTCTTCATTATGCAACAGATGATTTATGCATACTTACTAAAGCAGCTATGCAGCAAATTGATGTTTTATATAAAGAAAAT
AAAAGTTACATAA

Upstream 100 bases:

>100_bases
CAACTGAAACTCCCCTAGATATCAGCCCGTAATTTTGTTAACTTGATTATGTTACAAATTCAAAATACAGATTTCAGTTA
ATGAGTAAGGGGATGAAATC

Downstream 100 bases:

>100_bases
AAATTGGAGTATTATTTTGTGCTCTACACGCACGTCAGCAACATATTGATGATTTATGGCAGCCTCTGGAACTTATTCAT
CAAAGACAACAATTGATGGA

Product: DNA repair protein UmuC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MKDISHREVYALVDINNCYVSCERLFNPKLNDKPVVVLSNNDGCVVSRSEEAKLLGIKMGVPWFQIEKDALQAGVQVYSS
NYTLYAEMSRRFFAVLGEFFSPDDLEAYSIDECFIHLTPYLQSIDISDYCNKVRNTLLKWLGLPCCIGIGYSKTQAKLAN
HYAKKIKSFKGVCNFITLDPLIMEDLMQQTSVKEVWGIGYQLVKQLQSYEVYTCLDLTFANEHHMAKAFSVVMARTIREL
KGQSCIQLDDPAIPTKRILASRSFAQALSSIEIIKQALIFHLNRAHRRLMKQEQLCACVQVMLYEKPTNRPIKKSHLKQL
VFIMQQMIYAYLLKQLCSKLMFYIKKIKVT

Sequences:

>Translated_350_residues
MKDISHREVYALVDINNCYVSCERLFNPKLNDKPVVVLSNNDGCVVSRSEEAKLLGIKMGVPWFQIEKDALQAGVQVYSS
NYTLYAEMSRRFFAVLGEFFSPDDLEAYSIDECFIHLTPYLQSIDISDYCNKVRNTLLKWLGLPCCIGIGYSKTQAKLAN
HYAKKIKSFKGVCNFITLDPLIMEDLMQQTSVKEVWGIGYQLVKQLQSYEVYTCLDLTFANEHHMAKAFSVVMARTIREL
KGQSCIQLDDPAIPTKRILASRSFAQALSSIEIIKQALIFHLNRAHRRLMKQEQLCACVQVMLYEKPTNRPIKKSHLKQL
VFIMQQMIYAYLLKQLCSKLMFYIKKIKVT
>Mature_350_residues
MKDISHREVYALVDINNCYVSCERLFNPKLNDKPVVVLSNNDGCVVSRSEEAKLLGIKMGVPWFQIEKDALQAGVQVYSS
NYTLYAEMSRRFFAVLGEFFSPDDLEAYSIDECFIHLTPYLQSIDISDYCNKVRNTLLKWLGLPCCIGIGYSKTQAKLAN
HYAKKIKSFKGVCNFITLDPLIMEDLMQQTSVKEVWGIGYQLVKQLQSYEVYTCLDLTFANEHHMAKAFSVVMARTIREL
KGQSCIQLDDPAIPTKRILASRSFAQALSSIEIIKQALIFHLNRAHRRLMKQEQLCACVQVMLYEKPTNRPIKKSHLKQL
VFIMQQMIYAYLLKQLCSKLMFYIKKIKVT

Specific function: Involved in UV protection and mutation [H]

COG id: COG0389

COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 umuC domain [H]

Homologues:

Organism=Escherichia coli, GI1787432, Length=300, Percent_Identity=41.3333333333333, Blast_Score=226, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017961
- InterPro:   IPR001126
- InterPro:   IPR017963 [H]

Pfam domain/function: PF00817 IMS [H]

EC number: NA

Molecular weight: Translated: 40280; Mature: 40280

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS50173 UMUC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDISHREVYALVDINNCYVSCERLFNPKLNDKPVVVLSNNDGCVVSRSEEAKLLGIKMG
CCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCEEEEEEEC
VPWFQIEKDALQAGVQVYSSNYTLYAEMSRRFFAVLGEFFSPDDLEAYSIDECFIHLTPY
CCHHEECHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHH
LQSIDISDYCNKVRNTLLKWLGLPCCIGIGYSKTQAKLANHYAKKIKSFKGVCNFITLDP
HHHCCHHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
LIMEDLMQQTSVKEVWGIGYQLVKQLQSYEVYTCLDLTFANEHHMAKAFSVVMARTIREL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHH
KGQSCIQLDDPAIPTKRILASRSFAQALSSIEIIKQALIFHLNRAHRRLMKQEQLCACVQ
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMLYEKPTNRPIKKSHLKQLVFIMQQMIYAYLLKQLCSKLMFYIKKIKVT
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKDISHREVYALVDINNCYVSCERLFNPKLNDKPVVVLSNNDGCVVSRSEEAKLLGIKMG
CCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCEEEEEEEC
VPWFQIEKDALQAGVQVYSSNYTLYAEMSRRFFAVLGEFFSPDDLEAYSIDECFIHLTPY
CCHHEECHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHH
LQSIDISDYCNKVRNTLLKWLGLPCCIGIGYSKTQAKLANHYAKKIKSFKGVCNFITLDP
HHHCCHHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
LIMEDLMQQTSVKEVWGIGYQLVKQLQSYEVYTCLDLTFANEHHMAKAFSVVMARTIREL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHH
KGQSCIQLDDPAIPTKRILASRSFAQALSSIEIIKQALIFHLNRAHRRLMKQEQLCACVQ
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMLYEKPTNRPIKKSHLKQLVFIMQQMIYAYLLKQLCSKLMFYIKKIKVT
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1991707 [H]