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The map label for this gene is yisV [H]

Identifier: 213158394

GI number: 213158394

Start: 2421909

End: 2423348

Strand: Direct

Name: yisV [H]

Synonym: AB57_2342

Alternate gene names: 213158394

Gene position: 2421909-2423348 (Clockwise)

Preceding gene: 213158391

Following gene: 213158406

Centisome position: 59.79

GC content: 40.56

Gene sequence:

>1440_bases
ATGTATAAGCAAACAGTACAGTTAGAGATAATTAGTGTGAACCAGACCAAAACAAAAATCGAGTTTGTCATTTCACAGAT
TGAACAACAAATTAAGAATCGTTCTTTAACTCCAGGAACCCGACTTCCCTCTGTACGTAAACTAGCCAAAGATTTAGGTT
TTTCTGTTTCTACTATTGTCGAAGCTTACGAGCGATTAATTGCCCTAGGTAAAATTGAATCACGTAGTGGTTCCGGCTTT
TATGTCGTGGCACCCCTTGCACCTTTAGCCTTAAGTGAATTAGGACCCAAATTAGATCGCTCTATAGATCCGTTATGGAT
TTCACGTCAGTCTTTAGAAGCACAACCTAATGCGTTTAAACCCGGTTGTGGTTGGTTACCAAATGATTGGATGCCACTGG
AAAGTATCCGCAAAGCATTAAGGTCAGCCACACGTAACGAAGACGATAGCTTATTGGGTTATTCTTCACCGTTGGGGCTG
CCCGCATTAAGAGATCTACTAGCTAGACGGGCACAAAGTAAAGGTATAGAGGCAAACCTTAATCAAGTTCTTCTAACCGA
TTCAGGCACTCAAGCTATTGATCTGGTTTGTCGTTTTTTACTTAAACCAGATGATGTAGTTCTAATTGATGACCCTTGCT
ACTTTAACTTTCATGCTCTACTTAAAGTGCATCAAGTTAAAGTTGTTGGTATTCCCTACACTCCAAATGGCCCGGACTTA
GAGGCATTTAAAGAAGCTATCGAGAGCTATAACCCTCGGCTTTATATTACAAATTCCGGAATACACAACCCAACTGGTGC
AACACTCTCACTCTCGACAGCTCATCAATTATTAAAGTTGATTGATCACTCTAATTTAATTGTGATTGAAGACGATATCT
TCTCAGATTTTGAATATACTCCCGCTCCACGACTTGCAGCCCTAGACAACCTTTCACGCGTGATTTTTATTGGAAGTTTC
TCTAAAACGCTCTCTGCTTCTATCCGCTGCGGCTATATTATTGCGAAACCAGAATGGATTGATCAAATTACCGATTTAAA
AATAGCCACCAGCTTTTCTCACAATGGACTCTCAGCCAAGATTTTACACACAGCTTTAACCGATGGTTCTTATCGTAAGC
ATCTAGATTTATTAAAAGTTCGTTTAGCTCAAGCCATGCAAGAAACAATCGCGAAGCTTAAATCGATTGGGATAGAACCG
TGGATTGAGCCCAAAGCTGGAATTTTTGTGTGGTGTCGTCTACCGGAAGGTGTAGATGCAGCGAAGATTGCCCGTTTTTG
CCTGAATCGGCAAGTGATACTCGCCCCGGGTAATGCCTTTAGCCAAGCACAATCGGCAGGTCAATTTATCCGTTTTAATA
TTACACAATCAAATCATGATTATATTTATAAGACTCTTGCAGAAGCGCTTCTACAAGAGTCGTTAGAGAAACAAGTTTAA

Upstream 100 bases:

>100_bases
ATAAACTTTTGCATATTATTCTCCGCAACTATACGAAGAATTTAAGCTGTGATATGGTGTCAAAACCAGATACAAAGCAG
TACAATTTAAAAAAACTGTT

Downstream 100 bases:

>100_bases
GCCTGTTTTTGCTTTTGTTCCATATAAGCAAAATAGCCCGGCCCAGCCGAAACCTGAACTTGTTTTGCATGTAATGGTTC
ACGACATACTGAACACACCA

Product: transcriptional regulator, GntR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MYKQTVQLEIISVNQTKTKIEFVISQIEQQIKNRSLTPGTRLPSVRKLAKDLGFSVSTIVEAYERLIALGKIESRSGSGF
YVVAPLAPLALSELGPKLDRSIDPLWISRQSLEAQPNAFKPGCGWLPNDWMPLESIRKALRSATRNEDDSLLGYSSPLGL
PALRDLLARRAQSKGIEANLNQVLLTDSGTQAIDLVCRFLLKPDDVVLIDDPCYFNFHALLKVHQVKVVGIPYTPNGPDL
EAFKEAIESYNPRLYITNSGIHNPTGATLSLSTAHQLLKLIDHSNLIVIEDDIFSDFEYTPAPRLAALDNLSRVIFIGSF
SKTLSASIRCGYIIAKPEWIDQITDLKIATSFSHNGLSAKILHTALTDGSYRKHLDLLKVRLAQAMQETIAKLKSIGIEP
WIEPKAGIFVWCRLPEGVDAAKIARFCLNRQVILAPGNAFSQAQSAGQFIRFNITQSNHDYIYKTLAEALLQESLEKQV

Sequences:

>Translated_479_residues
MYKQTVQLEIISVNQTKTKIEFVISQIEQQIKNRSLTPGTRLPSVRKLAKDLGFSVSTIVEAYERLIALGKIESRSGSGF
YVVAPLAPLALSELGPKLDRSIDPLWISRQSLEAQPNAFKPGCGWLPNDWMPLESIRKALRSATRNEDDSLLGYSSPLGL
PALRDLLARRAQSKGIEANLNQVLLTDSGTQAIDLVCRFLLKPDDVVLIDDPCYFNFHALLKVHQVKVVGIPYTPNGPDL
EAFKEAIESYNPRLYITNSGIHNPTGATLSLSTAHQLLKLIDHSNLIVIEDDIFSDFEYTPAPRLAALDNLSRVIFIGSF
SKTLSASIRCGYIIAKPEWIDQITDLKIATSFSHNGLSAKILHTALTDGSYRKHLDLLKVRLAQAMQETIAKLKSIGIEP
WIEPKAGIFVWCRLPEGVDAAKIARFCLNRQVILAPGNAFSQAQSAGQFIRFNITQSNHDYIYKTLAEALLQESLEKQV
>Mature_479_residues
MYKQTVQLEIISVNQTKTKIEFVISQIEQQIKNRSLTPGTRLPSVRKLAKDLGFSVSTIVEAYERLIALGKIESRSGSGF
YVVAPLAPLALSELGPKLDRSIDPLWISRQSLEAQPNAFKPGCGWLPNDWMPLESIRKALRSATRNEDDSLLGYSSPLGL
PALRDLLARRAQSKGIEANLNQVLLTDSGTQAIDLVCRFLLKPDDVVLIDDPCYFNFHALLKVHQVKVVGIPYTPNGPDL
EAFKEAIESYNPRLYITNSGIHNPTGATLSLSTAHQLLKLIDHSNLIVIEDDIFSDFEYTPAPRLAALDNLSRVIFIGSF
SKTLSASIRCGYIIAKPEWIDQITDLKIATSFSHNGLSAKILHTALTDGSYRKHLDLLKVRLAQAMQETIAKLKSIGIEP
WIEPKAGIFVWCRLPEGVDAAKIARFCLNRQVILAPGNAFSQAQSAGQFIRFNITQSNHDYIYKTLAEALLQESLEKQV

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=318, Percent_Identity=24.2138364779874, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI33469970, Length=318, Percent_Identity=24.2138364779874, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI1787710, Length=456, Percent_Identity=27.1929824561404, Blast_Score=156, Evalue=4e-39,
Organism=Escherichia coli, GI1790797, Length=467, Percent_Identity=25.2676659528908, Blast_Score=147, Evalue=1e-36,
Organism=Drosophila melanogaster, GI21356535, Length=302, Percent_Identity=22.5165562913907, Blast_Score=82, Evalue=9e-16,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 53191; Mature: 53191

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKQTVQLEIISVNQTKTKIEFVISQIEQQIKNRSLTPGTRLPSVRKLAKDLGFSVSTIV
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHH
EAYERLIALGKIESRSGSGFYVVAPLAPLALSELGPKLDRSIDPLWISRQSLEAQPNAFK
HHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHCCCHHHCCCCCCEEEHHHCCCCCCCCC
PGCGWLPNDWMPLESIRKALRSATRNEDDSLLGYSSPLGLPALRDLLARRAQSKGIEANL
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCC
NQVLLTDSGTQAIDLVCRFLLKPDDVVLIDDPCYFNFHALLKVHQVKVVGIPYTPNGPDL
CEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHEEEEEEEEEEECCCCCCCCH
EAFKEAIESYNPRLYITNSGIHNPTGATLSLSTAHQLLKLIDHSNLIVIEDDIFSDFEYT
HHHHHHHHCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
PAPRLAALDNLSRVIFIGSFSKTLSASIRCGYIIAKPEWIDQITDLKIATSFSHNGLSAK
CCCHHHHHHCCCEEEEEECCHHHHHCCCEEEEEEECCHHHHHHHCEEEEEECCCCCCCCE
ILHTALTDGSYRKHLDLLKVRLAQAMQETIAKLKSIGIEPWIEPKAGIFVWCRLPEGVDA
EHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCH
AKIARFCLNRQVILAPGNAFSQAQSAGQFIRFNITQSNHDYIYKTLAEALLQESLEKQV
HHHHHHHHCCEEEEECCCHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYKQTVQLEIISVNQTKTKIEFVISQIEQQIKNRSLTPGTRLPSVRKLAKDLGFSVSTIV
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHH
EAYERLIALGKIESRSGSGFYVVAPLAPLALSELGPKLDRSIDPLWISRQSLEAQPNAFK
HHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHCCCHHHCCCCCCEEEHHHCCCCCCCCC
PGCGWLPNDWMPLESIRKALRSATRNEDDSLLGYSSPLGLPALRDLLARRAQSKGIEANL
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCC
NQVLLTDSGTQAIDLVCRFLLKPDDVVLIDDPCYFNFHALLKVHQVKVVGIPYTPNGPDL
CEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHEEEEEEEEEEECCCCCCCCH
EAFKEAIESYNPRLYITNSGIHNPTGATLSLSTAHQLLKLIDHSNLIVIEDDIFSDFEYT
HHHHHHHHCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
PAPRLAALDNLSRVIFIGSFSKTLSASIRCGYIIAKPEWIDQITDLKIATSFSHNGLSAK
CCCHHHHHHCCCEEEEEECCHHHHHCCCEEEEEEECCHHHHHHHCEEEEEECCCCCCCCE
ILHTALTDGSYRKHLDLLKVRLAQAMQETIAKLKSIGIEPWIEPKAGIFVWCRLPEGVDA
EHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCH
AKIARFCLNRQVILAPGNAFSQAQSAGQFIRFNITQSNHDYIYKTLAEALLQESLEKQV
HHHHHHHHCCEEEEECCCHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]