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The map label for this gene is ybhR [C]

Identifier: 213158305

GI number: 213158305

Start: 3124869

End: 3125957

Strand: Direct

Name: ybhR [C]

Synonym: AB57_3032

Alternate gene names: 213158305

Gene position: 3124869-3125957 (Clockwise)

Preceding gene: 213158304

Following gene: 213158306

Centisome position: 77.15

GC content: 38.48

Gene sequence:

>1089_bases
ATGAAGGAATTTTTAAAGGCTTACGTTCAAACATTTAAAGATATTGTGAGTAACAGTTCAGTTTTCACAACACTTATTTT
ATCCGTCATTCTTTATAGCTTTTTTTATCCGACAGCCTATAAAGCTGAGCGCGCAGAATCAATTCCAATCGTCATTGTTG
ATGAAGAACAAAGTCTTTTAACTTCTCAAGTCATTGGCCAAACAGCCAATAGCCCTCATGTTAAAATTGTTGATGTCACT
GCTAATTTTCTTGAAGCTGAACAAATGGTCCGCGAACAAAAAGCCGATGGTATTTTACTTTTACCAAGCAATTTAACGCA
GAGCTTACGCCGCGGAGAAACTGGTGGAATCGGCTTATACTTAAGCACAACCAACTTTTTAAAAACTAAAGAAATTGGGT
TAGGTCTTGCCACTTCTATTGAAGCAACCTTAAAGGAATATATTGAAAGGTTTGGACAGCGTACACACTTCCAGCCTGCT
CTTTCTATTCACCAAATGCCTTTATTTAATACGCTTTCAGGCTACGGTAGTTATATTTTTCCTGCAGTTGCATCACTTAT
TATTCACCAAACAATTGTGTTAGGTCTGGCCATGCTGGTTGCAAGTTACCGCGAACAACATGAAAAAATTACCCCTATTC
GTTTTGCAGGAATTTTTGCCAGTATCTTTACAATTGGTTGTTTAGGAAGTTTTTATCTTTTTGGTTTTACCTTGTGGTTC
AATGACTATCCACACGGTGGAAACTTTGTCGGTTTGCTAGTCGCTGTTCCTATTTTTATTAGCTGTGTAATTGGACTAGG
TATGCTGATTGGCTCACTTTTAGACATGCCGGAACGTGCCGGTCATATTGTATTTAGCTCAGTTCCTCTTTTCTTATTAA
CTGGCGCCGCCTGGCCTCATCAAGCCATGCCTGAATGGTTGCAATGGTTTGCTTGGTGTTTACCCTCTACACACGCCGTA
CAGATGTTTGTACAACTTAATCAAATGGGCGTTCCTTTAAATGTCGTGGCCCCGAAATTAATTTTTCTTGCGACTATTGG
GGTTATATTTTTAATTACTGCCTATTCACGTTTAAAAGTATCTAAATAA

Upstream 100 bases:

>100_bases
TCATTTCGATGTCTCCTTTCTTAATACTTATTGGCTACTGCCTTATTTATTTCTTTTTAAGTTGTTTGCTACTTAAAAAA
CTGGTTCAAGGAGCAACATC

Downstream 100 bases:

>100_bases
ACTTATTTACAGGCTAATTAAAGTGTACAGATTATATTTTTATTTACTATAAAATCTTATAGTTAAAGCTCATTTCTTAA
AAAAATTGACTTAAATTTTA

Product: ABC-2 type transporter family

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease Component; ABC-Type Multidrug Transport System Protein; ABC-2 Type Transport System Permease; Conserved Transporter; ABC Transporter Membrane Protein; ABC Transporter Permease; ABC-2 Type Transporter Family; ABC Transporter Permease Protein; ABC-2 Type Transport System Permease Protein; Transport-Related Membrane Protein; ABC-2 Type Transporter Superfamily; Transmembrane Protein; ABC-2 Type Transporter Domain Protein; Multidrug ABC Transporter Permease Protein; ABC Transporter Transmembrane Protein; Integral Membrane Protein; Multidrug ABC Transporter Permease Component; Abc Transporter; Abc-2 Type Transporter; ABC-2 Type Transporter Family Protein; Inner Membrane Permease Protein; Permease Component Of ABC Transporter; Antibiotic Transport System Permease Protein

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKEFLKAYVQTFKDIVSNSSVFTTLILSVILYSFFYPTAYKAERAESIPIVIVDEEQSLLTSQVIGQTANSPHVKIVDVT
ANFLEAEQMVREQKADGILLLPSNLTQSLRRGETGGIGLYLSTTNFLKTKEIGLGLATSIEATLKEYIERFGQRTHFQPA
LSIHQMPLFNTLSGYGSYIFPAVASLIIHQTIVLGLAMLVASYREQHEKITPIRFAGIFASIFTIGCLGSFYLFGFTLWF
NDYPHGGNFVGLLVAVPIFISCVIGLGMLIGSLLDMPERAGHIVFSSVPLFLLTGAAWPHQAMPEWLQWFAWCLPSTHAV
QMFVQLNQMGVPLNVVAPKLIFLATIGVIFLITAYSRLKVSK

Sequences:

>Translated_362_residues
MKEFLKAYVQTFKDIVSNSSVFTTLILSVILYSFFYPTAYKAERAESIPIVIVDEEQSLLTSQVIGQTANSPHVKIVDVT
ANFLEAEQMVREQKADGILLLPSNLTQSLRRGETGGIGLYLSTTNFLKTKEIGLGLATSIEATLKEYIERFGQRTHFQPA
LSIHQMPLFNTLSGYGSYIFPAVASLIIHQTIVLGLAMLVASYREQHEKITPIRFAGIFASIFTIGCLGSFYLFGFTLWF
NDYPHGGNFVGLLVAVPIFISCVIGLGMLIGSLLDMPERAGHIVFSSVPLFLLTGAAWPHQAMPEWLQWFAWCLPSTHAV
QMFVQLNQMGVPLNVVAPKLIFLATIGVIFLITAYSRLKVSK
>Mature_362_residues
MKEFLKAYVQTFKDIVSNSSVFTTLILSVILYSFFYPTAYKAERAESIPIVIVDEEQSLLTSQVIGQTANSPHVKIVDVT
ANFLEAEQMVREQKADGILLLPSNLTQSLRRGETGGIGLYLSTTNFLKTKEIGLGLATSIEATLKEYIERFGQRTHFQPA
LSIHQMPLFNTLSGYGSYIFPAVASLIIHQTIVLGLAMLVASYREQHEKITPIRFAGIFASIFTIGCLGSFYLFGFTLWF
NDYPHGGNFVGLLVAVPIFISCVIGLGMLIGSLLDMPERAGHIVFSSVPLFLLTGAAWPHQAMPEWLQWFAWCLPSTHAV
QMFVQLNQMGVPLNVVAPKLIFLATIGVIFLITAYSRLKVSK

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787010, Length=342, Percent_Identity=22.8070175438596, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40113; Mature: 40113

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFLKAYVQTFKDIVSNSSVFTTLILSVILYSFFYPTAYKAERAESIPIVIVDEEQSLL
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEECCHHHHH
TSQVIGQTANSPHVKIVDVTANFLEAEQMVREQKADGILLLPSNLTQSLRRGETGGIGLY
HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCEEEE
LSTTNFLKTKEIGLGLATSIEATLKEYIERFGQRTHFQPALSIHQMPLFNTLSGYGSYIF
EECCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHCCHHHH
PAVASLIIHQTIVLGLAMLVASYREQHEKITPIRFAGIFASIFTIGCLGSFYLFGFTLWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NDYPHGGNFVGLLVAVPIFISCVIGLGMLIGSLLDMPERAGHIVFSSVPLFLLTGAAWPH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEEECCHHHHHCCCCCCH
QAMPEWLQWFAWCLPSTHAVQMFVQLNQMGVPLNVVAPKLIFLATIGVIFLITAYSRLKV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SK
CC
>Mature Secondary Structure
MKEFLKAYVQTFKDIVSNSSVFTTLILSVILYSFFYPTAYKAERAESIPIVIVDEEQSLL
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEECCHHHHH
TSQVIGQTANSPHVKIVDVTANFLEAEQMVREQKADGILLLPSNLTQSLRRGETGGIGLY
HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCEEEE
LSTTNFLKTKEIGLGLATSIEATLKEYIERFGQRTHFQPALSIHQMPLFNTLSGYGSYIF
EECCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHCCHHHH
PAVASLIIHQTIVLGLAMLVASYREQHEKITPIRFAGIFASIFTIGCLGSFYLFGFTLWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NDYPHGGNFVGLLVAVPIFISCVIGLGMLIGSLLDMPERAGHIVFSSVPLFLLTGAAWPH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEEECCHHHHHCCCCCCH
QAMPEWLQWFAWCLPSTHAVQMFVQLNQMGVPLNVVAPKLIFLATIGVIFLITAYSRLKV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA