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The map label for this gene is ybgC [C]

Identifier: 213158276

GI number: 213158276

Start: 3092105

End: 3092512

Strand: Direct

Name: ybgC [C]

Synonym: AB57_2997

Alternate gene names: 213158276

Gene position: 3092105-3092512 (Clockwise)

Preceding gene: 213158275

Following gene: 213158277

Centisome position: 76.34

GC content: 39.22

Gene sequence:

>408_bases
ATGGCGAATCATTTTGAATTCAACATTCGTGTTTATATTGAAGATACGGACGCAGGTGGTATTGTTTACCATGCCAACCA
CATTCGCTATATGGAACGTACCCGTACAGAATGGCTCCGCGCTGCTGGCGTTGACCATTACTGGCATCAAAAAGACTACA
ACTTTGTGGTATATAAAATTGACGTAAAATATATGCGTCCTATTTTAATGGATGACTTAATTACTGTTACAGCGCGTGTA
GTTTCATGTAAAGCTGCGTCATTTGTGTTGCAACAAAATATTTATCGTGGTGAAATCTTGCTTGCTTCTGGTGAGGTTGA
GTTGGCATGTTTAAGTAAAGATCTAATGCCACGTCGTCTTCCGGAAGAAATACGTGATCTTATTCGTAAAGAATTGGAAC
AAGACTAA

Upstream 100 bases:

>100_bases
ATTTAAAAGCAGATGTATGACTTTGGATAGAACTGATATTTTATTCAACAGTCATATTTTAAATATAAAGCTCTATAGTG
AACTAAAACGGAATACTCTC

Downstream 100 bases:

>100_bases
AAAAACAACCGGCATATGTAACTATGGCAACAAACATTGAATCAACCCTGCATATTTCTGACCTTATTTTACAAGCAAGT
CCAGTCGTCCAGTTGGTCAT

Product: tol-pal system-associated acyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MANHFEFNIRVYIEDTDAGGIVYHANHIRYMERTRTEWLRAAGVDHYWHQKDYNFVVYKIDVKYMRPILMDDLITVTARV
VSCKAASFVLQQNIYRGEILLASGEVELACLSKDLMPRRLPEEIRDLIRKELEQD

Sequences:

>Translated_135_residues
MANHFEFNIRVYIEDTDAGGIVYHANHIRYMERTRTEWLRAAGVDHYWHQKDYNFVVYKIDVKYMRPILMDDLITVTARV
VSCKAASFVLQQNIYRGEILLASGEVELACLSKDLMPRRLPEEIRDLIRKELEQD
>Mature_134_residues
ANHFEFNIRVYIEDTDAGGIVYHANHIRYMERTRTEWLRAAGVDHYWHQKDYNFVVYKIDVKYMRPILMDDLITVTARVV
SCKAASFVLQQNIYRGEILLASGEVELACLSKDLMPRRLPEEIRDLIRKELEQD

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=127, Percent_Identity=38.5826771653543, Blast_Score=87, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15965; Mature: 15833

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANHFEFNIRVYIEDTDAGGIVYHANHIRYMERTRTEWLRAAGVDHYWHQKDYNFVVYKI
CCCEEEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
DVKYMRPILMDDLITVTARVVSCKAASFVLQQNIYRGEILLASGEVELACLSKDLMPRRL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCC
PEEIRDLIRKELEQD
CHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANHFEFNIRVYIEDTDAGGIVYHANHIRYMERTRTEWLRAAGVDHYWHQKDYNFVVYKI
CCEEEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
DVKYMRPILMDDLITVTARVVSCKAASFVLQQNIYRGEILLASGEVELACLSKDLMPRRL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCC
PEEIRDLIRKELEQD
CHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]