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The map label for this gene is ytnL [H]

Identifier: 213158275

GI number: 213158275

Start: 3090560

End: 3091894

Strand: Direct

Name: ytnL [H]

Synonym: AB57_2996

Alternate gene names: 213158275

Gene position: 3090560-3091894 (Clockwise)

Preceding gene: 213158274

Following gene: 213158276

Centisome position: 76.3

GC content: 39.33

Gene sequence:

>1335_bases
ATGTACAAAAAAGCCGCTTTAATTTTTCCACTTGCCCTAATAAGTCAATTGAGCCTAGCGGATTGGGTAAAAGATGCTAC
ACAACAAAATGAAAATCAGGTCATTCAATTAAGACAACACATCCATGAGTACCCTGAACTAGGCAATATGGAATTTAAAA
CATCTGCATTGGTTCAAAAAGAATTAAAGTCTTATGGCATTCAAGTCAAAACAGGTTATGCAAAAACAGGGGTAATCGGC
ATTTTAAAAGGGAATAACCCCGGCCCTATTATTGCGCTTAGAGCAGATATGGATGCGCTACCTATGGAAGAAAAAAGTGG
TGTGCCATTTGCTAGTAAACATAAGGCAATTTATCAAGGTAAAGAAACTTATGTGATGCATGCTTGTGGACACGATGCGC
ACACTGCAATGTTATTAGGTGCAGCAAAGATATTGGCGGCCAATAAAGATAAAATATCAGGCACTGTAGTTTTTGTATTT
CAGCCAGCTGAAGAAGGTGGAACAGATATAGATAACTTCACGCATGGTGATCAAATCGGCTCAAGAAAAATGATTGCGGA
TGGTGCATTTAAAGACTACAAACCAGAAGCTATTTTTGGCATGCATGTCATGTCCGGCATGAAAAGCGGACATCTATATT
ATAAAGATGGTGCTATTTTAAACAGTGCCGATCACTTACGGATTCAAGTCAACGGCAAGCAGGTGCATGGCTCTACCCCT
TGGTTAGGCAGAGATCCAATTTATGCATCAGCTCAAATGATTAATAATTTACAAAGCCTTATTAGTCGAAGAACCGACCT
AACCCAAGGTATGGGCGTTATTAGTATTGGCAATATTCAAGGCGGTACAGCTGGAAATGTGATTCCTGAACAGGTCAATA
TGATCGGTACTATTCGATCCAATAACGAACAGATCCGAGAAAATATTCTAAAGAGCTTACCAACTCTGGTGGAACATAAC
GCTCAAGCTAATGATGTAACAGCAAAAGTTGAAATTGCGCCTTATGCTCCAGTAACCATGAATCATAAAGCTCTTACTCA
ACTTATCCAGCCAACATTAGCCAAAACTGTTGGAGATTCGAATCTTCATGTTTTGGACCATAATGCAAGTGCAAGTGAAG
ATTTTGCCTATTATGGGAAATTAATGCCCTCTTTCTTCGTTTTCTTAGGAGCAACACCTGAAAATCAGGACTTAAGCCAA
GCTGCACCAAATCACAACCCTTCTTTTATAGTAGATGATAAGGCCTTAAAGACAGGAACCGAGCTACATATAAGATTCGT
TTTAGATTATCCGAATATCGCTAAACAAGTTCAGGCTGCATGGAAACAGTCGTAA

Upstream 100 bases:

>100_bases
TTTCGTTATACCTTATTGATTTTTTAATATTTTTAAAAACTGAATTATAAGAAATCTAGATATTAAATCTTCTGAACAAT
AATATTTTTAGGATAAGGAT

Downstream 100 bases:

>100_bases
CTTAACAATATGTTCACCATAGAGTGTTCCGTTTTAAAGAAGTAAGACAGCAGTCGCGATTGAAAGGTTGTGCCATAGGA
CTTAGTATGCAATCTGCTAA

Product: Peptidase M20D, amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MYKKAALIFPLALISQLSLADWVKDATQQNENQVIQLRQHIHEYPELGNMEFKTSALVQKELKSYGIQVKTGYAKTGVIG
ILKGNNPGPIIALRADMDALPMEEKSGVPFASKHKAIYQGKETYVMHACGHDAHTAMLLGAAKILAANKDKISGTVVFVF
QPAEEGGTDIDNFTHGDQIGSRKMIADGAFKDYKPEAIFGMHVMSGMKSGHLYYKDGAILNSADHLRIQVNGKQVHGSTP
WLGRDPIYASAQMINNLQSLISRRTDLTQGMGVISIGNIQGGTAGNVIPEQVNMIGTIRSNNEQIRENILKSLPTLVEHN
AQANDVTAKVEIAPYAPVTMNHKALTQLIQPTLAKTVGDSNLHVLDHNASASEDFAYYGKLMPSFFVFLGATPENQDLSQ
AAPNHNPSFIVDDKALKTGTELHIRFVLDYPNIAKQVQAAWKQS

Sequences:

>Translated_444_residues
MYKKAALIFPLALISQLSLADWVKDATQQNENQVIQLRQHIHEYPELGNMEFKTSALVQKELKSYGIQVKTGYAKTGVIG
ILKGNNPGPIIALRADMDALPMEEKSGVPFASKHKAIYQGKETYVMHACGHDAHTAMLLGAAKILAANKDKISGTVVFVF
QPAEEGGTDIDNFTHGDQIGSRKMIADGAFKDYKPEAIFGMHVMSGMKSGHLYYKDGAILNSADHLRIQVNGKQVHGSTP
WLGRDPIYASAQMINNLQSLISRRTDLTQGMGVISIGNIQGGTAGNVIPEQVNMIGTIRSNNEQIRENILKSLPTLVEHN
AQANDVTAKVEIAPYAPVTMNHKALTQLIQPTLAKTVGDSNLHVLDHNASASEDFAYYGKLMPSFFVFLGATPENQDLSQ
AAPNHNPSFIVDDKALKTGTELHIRFVLDYPNIAKQVQAAWKQS
>Mature_444_residues
MYKKAALIFPLALISQLSLADWVKDATQQNENQVIQLRQHIHEYPELGNMEFKTSALVQKELKSYGIQVKTGYAKTGVIG
ILKGNNPGPIIALRADMDALPMEEKSGVPFASKHKAIYQGKETYVMHACGHDAHTAMLLGAAKILAANKDKISGTVVFVF
QPAEEGGTDIDNFTHGDQIGSRKMIADGAFKDYKPEAIFGMHVMSGMKSGHLYYKDGAILNSADHLRIQVNGKQVHGSTP
WLGRDPIYASAQMINNLQSLISRRTDLTQGMGVISIGNIQGGTAGNVIPEQVNMIGTIRSNNEQIRENILKSLPTLVEHN
AQANDVTAKVEIAPYAPVTMNHKALTQLIQPTLAKTVGDSNLHVLDHNASASEDFAYYGKLMPSFFVFLGATPENQDLSQ
AAPNHNPSFIVDDKALKTGTELHIRFVLDYPNIAKQVQAAWKQS

Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=447, Percent_Identity=23.0425055928412, Blast_Score=88, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 48525; Mature: 48525

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKAALIFPLALISQLSLADWVKDATQQNENQVIQLRQHIHEYPELGNMEFKTSALVQK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ELKSYGIQVKTGYAKTGVIGILKGNNPGPIIALRADMDALPMEEKSGVPFASKHKAIYQG
HHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHCCHHHHCC
KETYVMHACGHDAHTAMLLGAAKILAANKDKISGTVVFVFQPAEEGGTDIDNFTHGDQIG
CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
SRKMIADGAFKDYKPEAIFGMHVMSGMKSGHLYYKDGAILNSADHLRIQVNGKQVHGSTP
CCCEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCEECCCCEEEEEECCEEECCCCC
WLGRDPIYASAQMINNLQSLISRRTDLTQGMGVISIGNIQGGTAGNVIPEQVNMIGTIRS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHEEEEEEC
NNEQIRENILKSLPTLVEHNAQANDVTAKVEIAPYAPVTMNHKALTQLIQPTLAKTVGDS
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEECHHHHHHHHHHHHHHHCCCC
NLHVLDHNASASEDFAYYGKLMPSFFVFLGATPENQDLSQAAPNHNPSFIVDDKALKTGT
CEEEEECCCCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHCCCCCCCEEECCHHHCCCC
ELHIRFVLDYPNIAKQVQAAWKQS
EEEEEEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure
MYKKAALIFPLALISQLSLADWVKDATQQNENQVIQLRQHIHEYPELGNMEFKTSALVQK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ELKSYGIQVKTGYAKTGVIGILKGNNPGPIIALRADMDALPMEEKSGVPFASKHKAIYQG
HHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHCCHHHHCC
KETYVMHACGHDAHTAMLLGAAKILAANKDKISGTVVFVFQPAEEGGTDIDNFTHGDQIG
CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
SRKMIADGAFKDYKPEAIFGMHVMSGMKSGHLYYKDGAILNSADHLRIQVNGKQVHGSTP
CCCEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCEECCCCEEEEEECCEEECCCCC
WLGRDPIYASAQMINNLQSLISRRTDLTQGMGVISIGNIQGGTAGNVIPEQVNMIGTIRS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHEEEEEEC
NNEQIRENILKSLPTLVEHNAQANDVTAKVEIAPYAPVTMNHKALTQLIQPTLAKTVGDS
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEECHHHHHHHHHHHHHHHCCCC
NLHVLDHNASASEDFAYYGKLMPSFFVFLGATPENQDLSQAAPNHNPSFIVDDKALKTGT
CEEEEECCCCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHCCCCCCCEEECCHHHCCCC
ELHIRFVLDYPNIAKQVQAAWKQS
EEEEEEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]