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The map label for this gene is ykwD [H]

Identifier: 213158266

GI number: 213158266

Start: 3079030

End: 3079599

Strand: Direct

Name: ykwD [H]

Synonym: AB57_2986

Alternate gene names: 213158266

Gene position: 3079030-3079599 (Clockwise)

Preceding gene: 213158265

Following gene: 213158269

Centisome position: 76.02

GC content: 38.07

Gene sequence:

>570_bases
ATGAATCTACTAAAAGTTTGTACTTTATTGCCTTGTAGCCTTGTTATTGCTGCCTGCTCCGTTAATTCATCAAGCACTCC
TCCTACACTGAGCTCTTCTACACCACAAGTTCAAAAATCATCGATAGAAATAAGCTGCCAAGATTTACAAAATCCTGCTT
ACCGACAAGCTGTGCTTAATACAATTAATGAAATTCGACAACATCCTCGCCAATGTGGTCAGCAGTATTTTTCTGCAGCT
AAACCTTTAAGCTGGAATAATAATTTATATCAAGGTGCAAGTGCTCACTCTAAAGATATGGCAAATAACAACTTTCTTGG
GCATGTTGGCTCAACAGGTTTAGATTTAAGAGCGAGATTAAAAAAATATCATATGCTGAGTAAAGCCAATGGTGAGAATG
TCGCGAGTGGACAAAAAACTTTAAATGAGGTCATGGCTAAATGGATCGCCAGTCCTCTGCATTGCAGTAATATCATGAAC
CCTAGATATACCAAATATGCCATTGCTTGTGCTTCTGACCAGTCTGCTAAACAAAGAAGTTACTGGACACAACAATTTGC
AGGTTTTTAA

Upstream 100 bases:

>100_bases
GAGTTGAATACTCGCTTTTTTTACACGCACATAAATTGCTCAGCTATTTTAATTTGGCGTATGATAAAAATATTAAAATA
ACTCGAACTCAGGCATTGCT

Downstream 100 bases:

>100_bases
AGTAGACTAAAAAGGCATCAAACAATTCAATCTACTTTAAAAAACCAGAGATTCTTTAGATAAGATCGACTCATTCTTTA
TGAGATGACACGGTTTCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MNLLKVCTLLPCSLVIAACSVNSSSTPPTLSSSTPQVQKSSIEISCQDLQNPAYRQAVLNTINEIRQHPRQCGQQYFSAA
KPLSWNNNLYQGASAHSKDMANNNFLGHVGSTGLDLRARLKKYHMLSKANGENVASGQKTLNEVMAKWIASPLHCSNIMN
PRYTKYAIACASDQSAKQRSYWTQQFAGF

Sequences:

>Translated_189_residues
MNLLKVCTLLPCSLVIAACSVNSSSTPPTLSSSTPQVQKSSIEISCQDLQNPAYRQAVLNTINEIRQHPRQCGQQYFSAA
KPLSWNNNLYQGASAHSKDMANNNFLGHVGSTGLDLRARLKKYHMLSKANGENVASGQKTLNEVMAKWIASPLHCSNIMN
PRYTKYAIACASDQSAKQRSYWTQQFAGF
>Mature_189_residues
MNLLKVCTLLPCSLVIAACSVNSSSTPPTLSSSTPQVQKSSIEISCQDLQNPAYRQAVLNTINEIRQHPRQCGQQYFSAA
KPLSWNNNLYQGASAHSKDMANNNFLGHVGSTGLDLRARLKKYHMLSKANGENVASGQKTLNEVMAKWIASPLHCSNIMN
PRYTKYAIACASDQSAKQRSYWTQQFAGF

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 20815; Mature: 20815

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLKVCTLLPCSLVIAACSVNSSSTPPTLSSSTPQVQKSSIEISCQDLQNPAYRQAVLN
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHEEEHHHHCCHHHHHHHHH
TINEIRQHPRQCGQQYFSAAKPLSWNNNLYQGASAHSKDMANNNFLGHVGSTGLDLRARL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHH
KKYHMLSKANGENVASGQKTLNEVMAKWIASPLHCSNIMNPRYTKYAIACASDQSAKQRS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEECCCCHHHHHH
YWTQQFAGF
HHHHHHCCC
>Mature Secondary Structure
MNLLKVCTLLPCSLVIAACSVNSSSTPPTLSSSTPQVQKSSIEISCQDLQNPAYRQAVLN
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHEEEHHHHCCHHHHHHHHH
TINEIRQHPRQCGQQYFSAAKPLSWNNNLYQGASAHSKDMANNNFLGHVGSTGLDLRARL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHH
KKYHMLSKANGENVASGQKTLNEVMAKWIASPLHCSNIMNPRYTKYAIACASDQSAKQRS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEECCCCHHHHHH
YWTQQFAGF
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]