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The map label for this gene is ydaM [H]

Identifier: 213158211

GI number: 213158211

Start: 3025443

End: 3026693

Strand: Direct

Name: ydaM [H]

Synonym: AB57_2930

Alternate gene names: 213158211

Gene position: 3025443-3026693 (Clockwise)

Preceding gene: 213158210

Following gene: 213158212

Centisome position: 74.69

GC content: 39.25

Gene sequence:

>1251_bases
ATGGCTCCAATTGATATCCTGTTTTTATTTGGCTTTTTAGGTATTTGGATTCCACAAGCATTTTGGGCATGGTTAAGCTA
TCAAGCGTGGAAATATTCCAAAACGGCTGAAAAAGAGCTGCAAAACTTACCAATACCAGAAAGATGGCCAGTTTTAAGTG
TTTTGATCCCTGCTTATAATGAAGGCGTTGTGATTGAGGACACTTTGCATGCCATTGCTCAACAGGACTATCCGGCAGAG
TCTTATGAAGTCTTACTGATCAATGATGGCTCCAAAGACAACACCCTTGAAATCGCAGAAAACCTCGCAAAAATTTATCC
TTGCATAAAAATTGTCAATGTACCCAAAGGTATGGGTGGTAAAGGTAAATCAAGAACGCTTAATAATGGTCTTCCCCATG
CCAAAGGTGAGTTAATTGTTGTTTACGACGCCGATAGTACCCCTGAACCCGATTGCGTCCGATTACTTGCCCAAACCTTG
TTAGCCGATAAAAAGCTAGTCGCGGTAAATGGCAAAGTCAGAACCCGTAACTGGCAAGATAGTATTTTGACTCGTTTTAT
TGCGATTGAATTCATCTTTTTCCAATGGATCTTTCAAGGTGGACGCTGGCAACGTTTTGAACTATCAACATTAATGGGAA
CAAATTATGTCATCTGGCGCGATGCTCTAGAGACTTTGGGCGGTTTTGATGAAAAATCGTTAGTGGATGATACAGAAATG
AGTTTCCGAATTTTTATCGGACAAAAACGAATTAAATGGGTTCCCTATGCAATTGGTTGGCAACAGGACCCTCCTTCGTT
AAGCGTATTCGTTAAACAGCGCTCACGCTGGACTCAAGGTAATTTTTATGTGACACGCAAATATTTACCCGTAGCACTGA
GAACCCCATTCCCAATCGGAATTGAAATTCTAAATAACATTATGTGCTATATCCTTTTTGTACCGGCTTTATTCTGGAGT
CATATTACCTTAACGCTTGGCTTACTTGATATTGCAGGTATTTCAGTTCTTGGTCCATTTACACTACTGTGGGGACTCTC
ATTTTGTCTCTATGTAGCACAAATGTGGTTTACGCTTTCTTTAGAAAAAGTTAAACCAGAACTCTATTTTTATTCTGTCT
TATCTTACGTAAGTTACTCACAAATCTTCTTATTTATTGTGTTTAAAGCCGCATTCGACATGCTAAAAAATAAAATACAG
GGCAACTCCCTTCAATGGTACAAAACGGAACGTAGCAAGGAGAAAAAATAA

Upstream 100 bases:

>100_bases
CTCGGTACATTTGGTAGCTATATTTCATGGATCTCCTTAGTGGTCGGGGCAATTTTATTATTGCTGCTCATCTCTTCTAT
TATTAGGAGGGTCCGTAAAA

Downstream 100 bases:

>100_bases
ATGAAAAAGACTTTTGATCTTTACCAAACAGCTCAAGTGCTCCTTGCCAGCACCAGTTTTTTGCTTGCCATGTCTACTCA
TGCTTATACATGGAAACTCG

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MAPIDILFLFGFLGIWIPQAFWAWLSYQAWKYSKTAEKELQNLPIPERWPVLSVLIPAYNEGVVIEDTLHAIAQQDYPAE
SYEVLLINDGSKDNTLEIAENLAKIYPCIKIVNVPKGMGGKGKSRTLNNGLPHAKGELIVVYDADSTPEPDCVRLLAQTL
LADKKLVAVNGKVRTRNWQDSILTRFIAIEFIFFQWIFQGGRWQRFELSTLMGTNYVIWRDALETLGGFDEKSLVDDTEM
SFRIFIGQKRIKWVPYAIGWQQDPPSLSVFVKQRSRWTQGNFYVTRKYLPVALRTPFPIGIEILNNIMCYILFVPALFWS
HITLTLGLLDIAGISVLGPFTLLWGLSFCLYVAQMWFTLSLEKVKPELYFYSVLSYVSYSQIFLFIVFKAAFDMLKNKIQ
GNSLQWYKTERSKEKK

Sequences:

>Translated_416_residues
MAPIDILFLFGFLGIWIPQAFWAWLSYQAWKYSKTAEKELQNLPIPERWPVLSVLIPAYNEGVVIEDTLHAIAQQDYPAE
SYEVLLINDGSKDNTLEIAENLAKIYPCIKIVNVPKGMGGKGKSRTLNNGLPHAKGELIVVYDADSTPEPDCVRLLAQTL
LADKKLVAVNGKVRTRNWQDSILTRFIAIEFIFFQWIFQGGRWQRFELSTLMGTNYVIWRDALETLGGFDEKSLVDDTEM
SFRIFIGQKRIKWVPYAIGWQQDPPSLSVFVKQRSRWTQGNFYVTRKYLPVALRTPFPIGIEILNNIMCYILFVPALFWS
HITLTLGLLDIAGISVLGPFTLLWGLSFCLYVAQMWFTLSLEKVKPELYFYSVLSYVSYSQIFLFIVFKAAFDMLKNKIQ
GNSLQWYKTERSKEKK
>Mature_415_residues
APIDILFLFGFLGIWIPQAFWAWLSYQAWKYSKTAEKELQNLPIPERWPVLSVLIPAYNEGVVIEDTLHAIAQQDYPAES
YEVLLINDGSKDNTLEIAENLAKIYPCIKIVNVPKGMGGKGKSRTLNNGLPHAKGELIVVYDADSTPEPDCVRLLAQTLL
ADKKLVAVNGKVRTRNWQDSILTRFIAIEFIFFQWIFQGGRWQRFELSTLMGTNYVIWRDALETLGGFDEKSLVDDTEMS
FRIFIGQKRIKWVPYAIGWQQDPPSLSVFVKQRSRWTQGNFYVTRKYLPVALRTPFPIGIEILNNIMCYILFVPALFWSH
ITLTLGLLDIAGISVLGPFTLLWGLSFCLYVAQMWFTLSLEKVKPELYFYSVLSYVSYSQIFLFIVFKAAFDMLKNKIQG
NSLQWYKTERSKEKK

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=256, Percent_Identity=28.125, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI87082284, Length=256, Percent_Identity=24.21875, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1790044, Length=117, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 47928; Mature: 47797

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPIDILFLFGFLGIWIPQAFWAWLSYQAWKYSKTAEKELQNLPIPERWPVLSVLIPAYN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEEECCCC
EGVVIEDTLHAIAQQDYPAESYEVLLINDGSKDNTLEIAENLAKIYPCIKIVNVPKGMGG
CCEEEHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHEEEECCCCCCC
KGKSRTLNNGLPHAKGELIVVYDADSTPEPDCVRLLAQTLLADKKLVAVNGKVRTRNWQD
CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCEEECCCHHH
SILTRFIAIEFIFFQWIFQGGRWQRFELSTLMGTNYVIWRDALETLGGFDEKSLVDDTEM
HHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCEEEEHHHHHHHCCCCCCCCCCCCCC
SFRIFIGQKRIKWVPYAIGWQQDPPSLSVFVKQRSRWTQGNFYVTRKYLPVALRTPFPIG
EEEEEEECCEEEEEEEEECCCCCCCCHHHHEEHHCCCCCCCEEEEEEEEEEEECCCCCHH
IEILNNIMCYILFVPALFWSHITLTLGLLDIAGISVLGPFTLLWGLSFCLYVAQMWFTLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKVKPELYFYSVLSYVSYSQIFLFIVFKAAFDMLKNKIQGNSLQWYKTERSKEKK
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
APIDILFLFGFLGIWIPQAFWAWLSYQAWKYSKTAEKELQNLPIPERWPVLSVLIPAYN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEEECCCC
EGVVIEDTLHAIAQQDYPAESYEVLLINDGSKDNTLEIAENLAKIYPCIKIVNVPKGMGG
CCEEEHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHEEEECCCCCCC
KGKSRTLNNGLPHAKGELIVVYDADSTPEPDCVRLLAQTLLADKKLVAVNGKVRTRNWQD
CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCEEECCCHHH
SILTRFIAIEFIFFQWIFQGGRWQRFELSTLMGTNYVIWRDALETLGGFDEKSLVDDTEM
HHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCEEEEHHHHHHHCCCCCCCCCCCCCC
SFRIFIGQKRIKWVPYAIGWQQDPPSLSVFVKQRSRWTQGNFYVTRKYLPVALRTPFPIG
EEEEEEECCEEEEEEEEECCCCCCCCHHHHEEHHCCCCCCCEEEEEEEEEEEECCCCCHH
IEILNNIMCYILFVPALFWSHITLTLGLLDIAGISVLGPFTLLWGLSFCLYVAQMWFTLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKVKPELYFYSVLSYVSYSQIFLFIVFKAAFDMLKNKIQGNSLQWYKTERSKEKK
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]