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The map label for this gene is yrdA [H]

Identifier: 213158150

GI number: 213158150

Start: 2952203

End: 2952748

Strand: Direct

Name: yrdA [H]

Synonym: AB57_2864

Alternate gene names: 213158150

Gene position: 2952203-2952748 (Clockwise)

Preceding gene: 213158149

Following gene: 213158151

Centisome position: 72.88

GC content: 37.36

Gene sequence:

>546_bases
ATGGCAAAAAACATCCGTCCTTATTTAGACCATCACCCACAAATTGATCCAAGCTGTTACATTGATGAAATGTCCGTGGT
TGTAGGTGATGTTAAATTGGCCGAAAATGTTTCGGTGTGGCCTTTTGCAGTCATTCGCGGAGATGTAAACAGTATTCAAA
TTGGCAAAAACAGTAATGTACAAGACCACTGTATGCTACATGTCAGCCATAAAAATGATGCAAAACCTAATGGTTCACCT
CTTATTATTGGTGAAGATGTGACAGTAGGCCATCATGTTACCTTACATGGTTGTACTATTGGTAACCGAGTTTTGGTCGG
GATCAATACGGTTATTTTAGATGATGTTGTTATTGAAGATGATGTGATGATTGGTGCGGGAAGCTTAGTTCCGCCTCGTA
AAGTTTTAAAAAGTGGTTATCTTTATGTTGGAAGCCCTGTACAACAAGTACGCCCTCTAACTGAAAAAGAATTGGCATTT
TTACCTTACTCAGCAAGACATTATGTAAAAGTGCAAAATAACCATAAAGATAATCAAATAAATTAA

Upstream 100 bases:

>100_bases
AATTTAAATAATTTTAGAATAGTTGAATTAAGCACTGATGCTATTAGCGTGAGTGCTTTTTTATTTTATACTTTTACTAA
ATTTTCTATTGATACTTCTC

Downstream 100 bases:

>100_bases
AACAAACCGAGTTTTTCAAACGATAGAGTTCTTAGCATGCTCTATCGTTTGTAAGATGACCGTAGCCAAAAACCCCTAAA
TTTCGTATCATACGACTTTT

Product: putative transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MAKNIRPYLDHHPQIDPSCYIDEMSVVVGDVKLAENVSVWPFAVIRGDVNSIQIGKNSNVQDHCMLHVSHKNDAKPNGSP
LIIGEDVTVGHHVTLHGCTIGNRVLVGINTVILDDVVIEDDVMIGAGSLVPPRKVLKSGYLYVGSPVQQVRPLTEKELAF
LPYSARHYVKVQNNHKDNQIN

Sequences:

>Translated_181_residues
MAKNIRPYLDHHPQIDPSCYIDEMSVVVGDVKLAENVSVWPFAVIRGDVNSIQIGKNSNVQDHCMLHVSHKNDAKPNGSP
LIIGEDVTVGHHVTLHGCTIGNRVLVGINTVILDDVVIEDDVMIGAGSLVPPRKVLKSGYLYVGSPVQQVRPLTEKELAF
LPYSARHYVKVQNNHKDNQIN
>Mature_180_residues
AKNIRPYLDHHPQIDPSCYIDEMSVVVGDVKLAENVSVWPFAVIRGDVNSIQIGKNSNVQDHCMLHVSHKNDAKPNGSPL
IIGEDVTVGHHVTLHGCTIGNRVLVGINTVILDDVVIEDDVMIGAGSLVPPRKVLKSGYLYVGSPVQQVRPLTEKELAFL
PYSARHYVKVQNNHKDNQIN

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=178, Percent_Identity=59.5505617977528, Blast_Score=225, Evalue=1e-60,
Organism=Escherichia coli, GI1787667, Length=156, Percent_Identity=34.6153846153846, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI87081681, Length=156, Percent_Identity=31.4102564102564, Blast_Score=94, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19957; Mature: 19826

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNIRPYLDHHPQIDPSCYIDEMSVVVGDVKLAENVSVWPFAVIRGDVNSIQIGKNSNV
CCCCCCCHHCCCCCCCCCEEEEEEEEEEECEEECCCCCCCEEEEEECCCCEEEECCCCCC
QDHCMLHVSHKNDAKPNGSPLIIGEDVTVGHHVTLHGCTIGNRVLVGINTVILDDVVIED
CCEEEEEEECCCCCCCCCCEEEEECCEEECEEEEEEEEECCCEEEEEEEEEEEEEEEEEC
DVMIGAGSLVPPRKVLKSGYLYVGSPVQQVRPLTEKELAFLPYSARHYVKVQNNHKDNQI
CEEEECCCCCCHHHHHHCCCEEECCCHHHHCCCCCCCEEECCCCCEEEEEEECCCCCCCC
N
C
>Mature Secondary Structure 
AKNIRPYLDHHPQIDPSCYIDEMSVVVGDVKLAENVSVWPFAVIRGDVNSIQIGKNSNV
CCCCCCHHCCCCCCCCCEEEEEEEEEEECEEECCCCCCCEEEEEECCCCEEEECCCCCC
QDHCMLHVSHKNDAKPNGSPLIIGEDVTVGHHVTLHGCTIGNRVLVGINTVILDDVVIED
CCEEEEEEECCCCCCCCCCEEEEECCEEECEEEEEEEEECCCEEEEEEEEEEEEEEEEEC
DVMIGAGSLVPPRKVLKSGYLYVGSPVQQVRPLTEKELAFLPYSARHYVKVQNNHKDNQI
CEEEECCCCCCHHHHHHCCCEEECCCHHHHCCCCCCCEEECCCCCEEEEEEECCCCCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]