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The map label for this gene is ybdD [C]

Identifier: 213158134

GI number: 213158134

Start: 2931925

End: 2932230

Strand: Reverse

Name: ybdD [C]

Synonym: AB57_2846

Alternate gene names: 213158134

Gene position: 2932230-2931925 (Counterclockwise)

Preceding gene: 213158135

Following gene: 213158133

Centisome position: 72.39

GC content: 39.87

Gene sequence:

>306_bases
ATGATGAATTTTAAATTTGCAAAAAATGGAACTGTCATTATTGCGAAAATCATCAAAATGACGGTGCTCTCGCAAAAAGA
ACTATTACTTTCTCCAAAGAATTGGTCGCGCATTGCAACCTTGTGGCAACGTTTGCAGCAAAGCTTTCGACTGATGGTTG
GGGTTCCAGATTACCAAACTTATCTGGAGCACATGAAAGCTCATCATCCTGATTTAACACCAATGGATGCGACGACTTTC
TACCGTCATTGTGTTGATTCGAGATATCCATCGGCAGGTGGTAATTTAAAGAAATGCCCTTGTTAA

Upstream 100 bases:

>100_bases
TTGGTATTGTGCGCCGTGCGTTAGCAAGCCCGACACCAACTGCTCATGAAGCACCAGCTGTATATGCTGATCCGAAAGTG
GTCACCTCACGAGGAGAGTA

Downstream 100 bases:

>100_bases
GTTGAGATTAATAGTCAGCTAAAGAAACGGTATGTGGTTAAACCATGTACCGTTTTTCTTTTTTGGAAAATGAAAAAGAG
TTTGCTTAAAGTCTGCTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MMNFKFAKNGTVIIAKIIKMTVLSQKELLLSPKNWSRIATLWQRLQQSFRLMVGVPDYQTYLEHMKAHHPDLTPMDATTF
YRHCVDSRYPSAGGNLKKCPC

Sequences:

>Translated_101_residues
MMNFKFAKNGTVIIAKIIKMTVLSQKELLLSPKNWSRIATLWQRLQQSFRLMVGVPDYQTYLEHMKAHHPDLTPMDATTF
YRHCVDSRYPSAGGNLKKCPC
>Mature_101_residues
MMNFKFAKNGTVIIAKIIKMTVLSQKELLLSPKNWSRIATLWQRLQQSFRLMVGVPDYQTYLEHMKAHHPDLTPMDATTF
YRHCVDSRYPSAGGNLKKCPC

Specific function: Unknown

COG id: COG2879

COG function: function code S; Uncharacterized small protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081761, Length=60, Percent_Identity=43.3333333333333, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11688; Mature: 11688

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNFKFAKNGTVIIAKIIKMTVLSQKELLLSPKNWSRIATLWQRLQQSFRLMVGVPDYQT
CCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
YLEHMKAHHPDLTPMDATTFYRHCVDSRYPSAGGNLKKCPC
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMNFKFAKNGTVIIAKIIKMTVLSQKELLLSPKNWSRIATLWQRLQQSFRLMVGVPDYQT
CCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
YLEHMKAHHPDLTPMDATTFYRHCVDSRYPSAGGNLKKCPC
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA