| Definition | Acinetobacter baumannii AB0057, complete genome. |
|---|---|
| Accession | NC_011586 |
| Length | 4,050,513 |
Click here to switch to the map view.
The map label for this gene is viuB [H]
Identifier: 213158110
GI number: 213158110
Start: 2906251
End: 2907111
Strand: Direct
Name: viuB [H]
Synonym: AB57_2822
Alternate gene names: 213158110
Gene position: 2906251-2907111 (Clockwise)
Preceding gene: 213158107
Following gene: 213158111
Centisome position: 71.75
GC content: 39.95
Gene sequence:
>861_bases ATGACAAAAATTGCAGAAAAATCGAAACAAGAATATGGCGACTTATTAAAAGAAAAAGACCATTTACAAGATATGGAACA GCTTGAGATGACTATTGTCTCGATCCAGACGCCGTATCCTTCTATTGTAAGAATTCAAGGAAAAATCAACACATTACAGC CAGAGCTCTGGCAAGCTCCCAATTTGGCAATTCGGTTAATTGTGAGTAATCCGCCAGAGGGACAACCCATTTCACGCGTC TATACGGTCCGTTCATTTAACCCTGTAAATGCTCAAATCGAAATTGATTTTGTTAAACATGAAGATTTAAGCCCAGCAAT GGAATGGCTTAATTCGGCTCAAGTGGGTACAAAAATCGGGCTTATTGGCCCACGCCCCCATTTCATTCCCAATTTCACAG CCAAAAAGCATGTGGTCATGTTTGCCGACGATACGGCTGTACCCGCGTTATATTCAATACTCAAGCAATGGGAAAATGGC GTAAGTGCGGATATTTTCATTGAAAGTTTTGAAAAAGATATTGCTAGCCAATTACCCGAACTTGAGCATGTCAAAATTCA TTCGTTCCATAAAGAACATCACACGTCACAGAAAGGCCTTCTTTTAAAAGCAGCATTTGCGCTAGAAAATTATGAAAATA TTACGATTTGGGCAGCTTGCGAACGCAACGAAGCAAGAGCCTTACGTCAATTTTTTCTAGAAGACCAACAGTTAAATAAA AATGACGTGCGTATTGCTGGCTATTGGAGAGATGGCGTATCAAGTTCAGAGTTAGACAAACTGCGTGCTCAACATTATCA GGAGCATATTCAACAAGGTAAGACCTTGAACGAATATGATGACCTCGATTTGGCAAATTAA
Upstream 100 bases:
>100_bases ATTTACATTAATGGCTAACTTGGTTATCGTAGCTCATAGAGAGATTACATCTATATCAATTATCGCGCTCTATAGTAATC ATTAAGCTTGGGTTATATAT
Downstream 100 bases:
>100_bases GTTTCTTTTACATACAAATAGGCACTGGCTCTGGATATACCTAAATGTTGGGCAACCGTTTCCACCGCCTTTTTAATTTC TAGTAAGCCATTATTCTTGA
Product: siderophore-interacting protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTKIAEKSKQEYGDLLKEKDHLQDMEQLEMTIVSIQTPYPSIVRIQGKINTLQPELWQAPNLAIRLIVSNPPEGQPISRV YTVRSFNPVNAQIEIDFVKHEDLSPAMEWLNSAQVGTKIGLIGPRPHFIPNFTAKKHVVMFADDTAVPALYSILKQWENG VSADIFIESFEKDIASQLPELEHVKIHSFHKEHHTSQKGLLLKAAFALENYENITIWAACERNEARALRQFFLEDQQLNK NDVRIAGYWRDGVSSSELDKLRAQHYQEHIQQGKTLNEYDDLDLAN
Sequences:
>Translated_286_residues MTKIAEKSKQEYGDLLKEKDHLQDMEQLEMTIVSIQTPYPSIVRIQGKINTLQPELWQAPNLAIRLIVSNPPEGQPISRV YTVRSFNPVNAQIEIDFVKHEDLSPAMEWLNSAQVGTKIGLIGPRPHFIPNFTAKKHVVMFADDTAVPALYSILKQWENG VSADIFIESFEKDIASQLPELEHVKIHSFHKEHHTSQKGLLLKAAFALENYENITIWAACERNEARALRQFFLEDQQLNK NDVRIAGYWRDGVSSSELDKLRAQHYQEHIQQGKTLNEYDDLDLAN >Mature_285_residues TKIAEKSKQEYGDLLKEKDHLQDMEQLEMTIVSIQTPYPSIVRIQGKINTLQPELWQAPNLAIRLIVSNPPEGQPISRVY TVRSFNPVNAQIEIDFVKHEDLSPAMEWLNSAQVGTKIGLIGPRPHFIPNFTAKKHVVMFADDTAVPALYSILKQWENGV SADIFIESFEKDIASQLPELEHVKIHSFHKEHHTSQKGLLLKAAFALENYENITIWAACERNEARALRQFFLEDQQLNKN DVRIAGYWRDGVSSSELDKLRAQHYQEHIQQGKTLNEYDDLDLAN
Specific function: Involved in intracellular removal of iron from iron- vulnibactin complex. Vulnibactin is a iron-chelating compound involved in transporting iron from the bacterial environment into the cell cytoplasm [H]
COG id: COG2375
COG function: function code P; Siderophore-interacting protein
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To E.coli yqjH [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013113 - InterPro: IPR017927 - InterPro: IPR017938 - InterPro: IPR007037 [H]
Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]
EC number: NA
Molecular weight: Translated: 32798; Mature: 32666
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIAEKSKQEYGDLLKEKDHLQDMEQLEMTIVSIQTPYPSIVRIQGKINTLQPELWQAP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCHHHHCCC NLAIRLIVSNPPEGQPISRVYTVRSFNPVNAQIEIDFVKHEDLSPAMEWLNSAQVGTKIG CEEEEEEECCCCCCCCHHEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCEEE LIGPRPHFIPNFTAKKHVVMFADDTAVPALYSILKQWENGVSADIFIESFEKDIASQLPE EECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC LEHVKIHSFHKEHHTSQKGLLLKAAFALENYENITIWAACERNEARALRQFFLEDQQLNK CCEEHHHHHHHHHCCCCCCHHEEEHHHHCCCCCEEEEEECCCHHHHHHHHHHHCHHCCCC NDVRIAGYWRDGVSSSELDKLRAQHYQEHIQQGKTLNEYDDLDLAN CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TKIAEKSKQEYGDLLKEKDHLQDMEQLEMTIVSIQTPYPSIVRIQGKINTLQPELWQAP CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCHHHHCCC NLAIRLIVSNPPEGQPISRVYTVRSFNPVNAQIEIDFVKHEDLSPAMEWLNSAQVGTKIG CEEEEEEECCCCCCCCHHEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCEEE LIGPRPHFIPNFTAKKHVVMFADDTAVPALYSILKQWENGVSADIFIESFEKDIASQLPE EECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC LEHVKIHSFHKEHHTSQKGLLLKAAFALENYENITIWAACERNEARALRQFFLEDQQLNK CCEEHHHHHHHHHCCCCCCHHEEEHHHHCCCCCEEEEEECCCHHHHHHHHHHHCHHCCCC NDVRIAGYWRDGVSSSELDKLRAQHYQEHIQQGKTLNEYDDLDLAN CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8698519 [H]