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The map label for this gene is mmgC [H]

Identifier: 213157970

GI number: 213157970

Start: 3574123

End: 3575286

Strand: Reverse

Name: mmgC [H]

Synonym: AB57_3464

Alternate gene names: 213157970

Gene position: 3575286-3574123 (Counterclockwise)

Preceding gene: 213157971

Following gene: 213157968

Centisome position: 88.27

GC content: 40.81

Gene sequence:

>1164_bases
ATGCAGCTCAATCCAATTTACTATAATGAACAACATATAGCTTTTGCCGATAATGTTCGTAGATTTGTACAAAAAGAAAT
GACACCTTTCGTTAATGAATGGGATGAGGCTGAGACATTCCCAAGAGAACTTTATAAAAAGGCTGCTGAAATTGGATTAC
TGGGTCTAGGTTTTTCAGAAGAATATGGTGGTATTCCAGATGCAGATCCATTCTATTCATTACTGGCTGGTATCGAAATG
GCAAAGGCGGGTTCAGGTGGGGTGCATATCTCGCTCATGGTCCATACCATTGGCGCCCCTCCCATTCAGTACTTTGGGAG
TGAGGAGTTAAAGGCTAGAGTTCTGCCAGGTATTATTTCCGGTGAGAAAATTTCGGCTTTAGCGATTACAGAACCTGGTG
GTGGTTCAGATGTTGCTGCATTACAGACTAAAGCTGTCAGAGATGGAGATTATTATATTGTTTCGGGCGAGAAAACATTT
ATTACATCGGGAATTCGTGCAGACTATTATACAGTTGCAGTGCGTACTGATCCGACAAAAACGGGTGCAGAAGGCATTTC
AATGTTACTCATTGATGCACATAGTGAAGGTATTACTAAAACACCTTTGAGAAAAATGGGATGGTGGGCATCAGATACGG
CACATTTGCATTTTGATCAAGTACGAGTACCTGTATCAAATCTACTTGGCAAAGAAAATGCCGGTTTTAAAGTTATTATG
AATAACTTTAATATGGAGCGGTTTTTCTTGGGAGTAGTCGCTTATGGGTATGCATTAGTCTGTTATGAAGAAGCTTTAGA
GTGGGCACAGCAACGTAAAACTTTTGGTAAGCGATTAATAGATCATCAAGTAGTACGCCATAAATTGGTAGATATGGCAA
CCCAACTGACCTCAACGCGGGCATTACTTGAAGAAACTGCATGGAAAATGACTCAGCTAAAACTACAAGGGCCTGAGCTG
GTGGCGCAAATTTCAATGCTTAAAAATGTTGCGACTCGAACTATGCAATTTTGTGCTGATGCAGCTGTACAAACATTAGG
TGGTATGGGCTTTATGCGAGGTACCAAGTCGGAACGTATTTACCGTGAGGTGAAGGTCAATATGATTGGCGGTGGTGCTG
AAGAAATTATGAAAGATTTGATTAGTAAACAGCTTGGTTATTAA

Upstream 100 bases:

>100_bases
TTTATGCCAAGAAAATGGAGATTCTTGCAACTTTTGACTCATGGTAAACATGACAAGATATGTTCTGGAATTAAATAAAA
ACATCAGGACATTTCTAAAA

Downstream 100 bases:

>100_bases
TTCTTATAAGGTGGACTTTGAGCCACCTTTTTTATTTCAAAGCCATTTCCCAAACCATTTCCGTTAACTCATCAATTTTG
ACTTTACCCTCAGATTTATA

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MQLNPIYYNEQHIAFADNVRRFVQKEMTPFVNEWDEAETFPRELYKKAAEIGLLGLGFSEEYGGIPDADPFYSLLAGIEM
AKAGSGGVHISLMVHTIGAPPIQYFGSEELKARVLPGIISGEKISALAITEPGGGSDVAALQTKAVRDGDYYIVSGEKTF
ITSGIRADYYTVAVRTDPTKTGAEGISMLLIDAHSEGITKTPLRKMGWWASDTAHLHFDQVRVPVSNLLGKENAGFKVIM
NNFNMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLEETAWKMTQLKLQGPEL
VAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERIYREVKVNMIGGGAEEIMKDLISKQLGY

Sequences:

>Translated_387_residues
MQLNPIYYNEQHIAFADNVRRFVQKEMTPFVNEWDEAETFPRELYKKAAEIGLLGLGFSEEYGGIPDADPFYSLLAGIEM
AKAGSGGVHISLMVHTIGAPPIQYFGSEELKARVLPGIISGEKISALAITEPGGGSDVAALQTKAVRDGDYYIVSGEKTF
ITSGIRADYYTVAVRTDPTKTGAEGISMLLIDAHSEGITKTPLRKMGWWASDTAHLHFDQVRVPVSNLLGKENAGFKVIM
NNFNMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLEETAWKMTQLKLQGPEL
VAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERIYREVKVNMIGGGAEEIMKDLISKQLGY
>Mature_387_residues
MQLNPIYYNEQHIAFADNVRRFVQKEMTPFVNEWDEAETFPRELYKKAAEIGLLGLGFSEEYGGIPDADPFYSLLAGIEM
AKAGSGGVHISLMVHTIGAPPIQYFGSEELKARVLPGIISGEKISALAITEPGGGSDVAALQTKAVRDGDYYIVSGEKTF
ITSGIRADYYTVAVRTDPTKTGAEGISMLLIDAHSEGITKTPLRKMGWWASDTAHLHFDQVRVPVSNLLGKENAGFKVIM
NNFNMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTRALLEETAWKMTQLKLQGPEL
VAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERIYREVKVNMIGGGAEEIMKDLISKQLGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=381, Percent_Identity=35.1706036745407, Blast_Score=211, Evalue=8e-55,
Organism=Homo sapiens, GI187960098, Length=381, Percent_Identity=31.758530183727, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI4557231, Length=381, Percent_Identity=31.758530183727, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI21361497, Length=375, Percent_Identity=32.5333333333333, Blast_Score=185, Evalue=7e-47,
Organism=Homo sapiens, GI4501859, Length=379, Percent_Identity=29.5514511873351, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI7656849, Length=378, Percent_Identity=30.6878306878307, Blast_Score=183, Evalue=2e-46,
Organism=Homo sapiens, GI4557233, Length=390, Percent_Identity=32.5641025641026, Blast_Score=181, Evalue=7e-46,
Organism=Homo sapiens, GI76496475, Length=393, Percent_Identity=31.2977099236641, Blast_Score=165, Evalue=8e-41,
Organism=Homo sapiens, GI4557235, Length=393, Percent_Identity=31.2977099236641, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI226958412, Length=380, Percent_Identity=28.9473684210526, Blast_Score=163, Evalue=2e-40,
Organism=Homo sapiens, GI226958414, Length=345, Percent_Identity=29.5652173913043, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI4503943, Length=361, Percent_Identity=28.2548476454294, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI7669494, Length=361, Percent_Identity=28.2548476454294, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI38505218, Length=389, Percent_Identity=26.9922879177378, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI48976061, Length=286, Percent_Identity=24.4755244755245, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI211971008, Length=286, Percent_Identity=24.4755244755245, Blast_Score=73, Evalue=4e-13,
Organism=Escherichia coli, GI87081958, Length=383, Percent_Identity=31.8537859007833, Blast_Score=191, Evalue=5e-50,
Organism=Escherichia coli, GI1786223, Length=369, Percent_Identity=27.9132791327913, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI87082384, Length=282, Percent_Identity=29.4326241134752, Blast_Score=84, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17551932, Length=379, Percent_Identity=31.9261213720317, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17538396, Length=381, Percent_Identity=32.0209973753281, Blast_Score=197, Evalue=9e-51,
Organism=Caenorhabditis elegans, GI17533517, Length=366, Percent_Identity=32.2404371584699, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17505929, Length=381, Percent_Identity=31.496062992126, Blast_Score=195, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17508101, Length=376, Percent_Identity=32.1808510638298, Blast_Score=194, Evalue=8e-50,
Organism=Caenorhabditis elegans, GI17569725, Length=380, Percent_Identity=32.6315789473684, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17570075, Length=376, Percent_Identity=32.1808510638298, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17534899, Length=369, Percent_Identity=31.9783197831978, Blast_Score=188, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI17506239, Length=376, Percent_Identity=31.1170212765957, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI71985184, Length=356, Percent_Identity=32.0224719101124, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI71982178, Length=277, Percent_Identity=31.7689530685921, Blast_Score=152, Evalue=4e-37,
Organism=Caenorhabditis elegans, GI71990804, Length=284, Percent_Identity=31.3380281690141, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI71985192, Length=277, Percent_Identity=32.4909747292419, Blast_Score=137, Evalue=7e-33,
Organism=Caenorhabditis elegans, GI32563615, Length=238, Percent_Identity=35.2941176470588, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17534353, Length=344, Percent_Identity=28.4883720930233, Blast_Score=111, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI17531909, Length=248, Percent_Identity=25, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17562446, Length=290, Percent_Identity=26.2068965517241, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24660351, Length=381, Percent_Identity=33.0708661417323, Blast_Score=198, Evalue=4e-51,
Organism=Drosophila melanogaster, GI21355753, Length=372, Percent_Identity=31.989247311828, Blast_Score=181, Evalue=6e-46,
Organism=Drosophila melanogaster, GI24646207, Length=375, Percent_Identity=31.7333333333333, Blast_Score=179, Evalue=4e-45,
Organism=Drosophila melanogaster, GI281363737, Length=345, Percent_Identity=33.0434782608696, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI21356377, Length=376, Percent_Identity=28.1914893617021, Blast_Score=165, Evalue=5e-41,
Organism=Drosophila melanogaster, GI24666513, Length=368, Percent_Identity=28.2608695652174, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI19920834, Length=328, Percent_Identity=31.4024390243902, Blast_Score=119, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42872; Mature: 42872

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLNPIYYNEQHIAFADNVRRFVQKEMTPFVNEWDEAETFPRELYKKAAEIGLLGLGFSE
CCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHCEEECCCCH
EYGGIPDADPFYSLLAGIEMAKAGSGGVHISLMVHTIGAPPIQYFGSEELKARVLPGIIS
HCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHCCCHHHHHHHCCCCCC
GEKISALAITEPGGGSDVAALQTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTK
CCCEEEEEEECCCCCCCHHHHHHHHEECCCEEEECCCCEEEECCCCCCEEEEEEECCCCC
TGAEGISMLLIDAHSEGITKTPLRKMGWWASDTAHLHFDQVRVPVSNLLGKENAGFKVIM
CCCCCEEEEEEECCCCCCCCCCHHHHCCCCCCCCEEEHHHHCCCHHHHCCCCCCCEEEEE
NNFNMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTR
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLEETAWKMTQLKLQGPELVAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERI
HHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHH
YREVKVNMIGGGAEEIMKDLISKQLGY
HHHHEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLNPIYYNEQHIAFADNVRRFVQKEMTPFVNEWDEAETFPRELYKKAAEIGLLGLGFSE
CCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHCEEECCCCH
EYGGIPDADPFYSLLAGIEMAKAGSGGVHISLMVHTIGAPPIQYFGSEELKARVLPGIIS
HCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHCCCHHHHHHHCCCCCC
GEKISALAITEPGGGSDVAALQTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTK
CCCEEEEEEECCCCCCCHHHHHHHHEECCCEEEECCCCEEEECCCCCCEEEEEEECCCCC
TGAEGISMLLIDAHSEGITKTPLRKMGWWASDTAHLHFDQVRVPVSNLLGKENAGFKVIM
CCCCCEEEEEEECCCCCCCCCCHHHHCCCCCCCCEEEHHHHCCCHHHHCCCCCCCEEEEE
NNFNMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTR
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLEETAWKMTQLKLQGPELVAQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERI
HHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHH
YREVKVNMIGGGAEEIMKDLISKQLGY
HHHHEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]