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The map label for this gene is kstR2 [H]

Identifier: 213157969

GI number: 213157969

Start: 3573492

End: 3574091

Strand: Direct

Name: kstR2 [H]

Synonym: AB57_3463

Alternate gene names: 213157969

Gene position: 3573492-3574091 (Clockwise)

Preceding gene: 213157961

Following gene: 213157976

Centisome position: 88.22

GC content: 38.83

Gene sequence:

>600_bases
ATGATTGCCACCTCAATTGAACAGATTCCAAATATCCCCTGCTTTGATGACAGTCCACGTGGACGTTTATTGCATGGTGC
AGCCTATCTTTTTCATAAGCAAGGCTATGATAAAACCACTGTTCGTGAACTTGCTCAGTTTATTGGAATCCAATCGGGAA
GCTTATTTCATCATTTCAAAAGTAAAGATGATATCCTCGCTCATGTGATGGAACAGACCATTATCTATAATCTTGCCCGT
TTAAATGATGCAGCAACTCAATCTACAGACCCAGAACAACAATTACGTGCTCTTATTAAAGCCGAACTGATCTCAATTAC
TGGAGATACTGGTGCAGCCATGGCTGTGTTGGTGTACGAATGGTTCGCTCTATCAAAAGAAAAGCAAGATTATCTTTTAA
AAATGCGTAATGAATATGAGCAAATCTGGCTCGATATCATTGAAAAGTTACGCACACAAGGTAAAGTCAAACACGATGCT
TTTATTTGGCGACGCTTAATTGGCGGTGCAATTTCATGGACTGTAACTTGGTATAAATCTGAGGGTAAAGTCAAAATTGA
TGAGTTAACGGAAATGGTTTGGGAAATGGCTTTGAAATAA

Upstream 100 bases:

>100_bases
GTTGACCAAATCTTCCATATTCGGCAAATAATCTGAAATGCGATGAAATTTAGTGAAAATTTCCACTATAGACTTTTTGA
TAAAGGAACAAACTGAGCAC

Downstream 100 bases:

>100_bases
AAAAGGTGGCTCAAAGTCCACCTTATAAGAATTAATAACCAAGCTGTTTACTAATCAAATCTTTCATAATTTCTTCAGCA
CCACCGCCAATCATATTGAC

Product: transcriptional regulator, TetR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MIATSIEQIPNIPCFDDSPRGRLLHGAAYLFHKQGYDKTTVRELAQFIGIQSGSLFHHFKSKDDILAHVMEQTIIYNLAR
LNDAATQSTDPEQQLRALIKAELISITGDTGAAMAVLVYEWFALSKEKQDYLLKMRNEYEQIWLDIIEKLRTQGKVKHDA
FIWRRLIGGAISWTVTWYKSEGKVKIDELTEMVWEMALK

Sequences:

>Translated_199_residues
MIATSIEQIPNIPCFDDSPRGRLLHGAAYLFHKQGYDKTTVRELAQFIGIQSGSLFHHFKSKDDILAHVMEQTIIYNLAR
LNDAATQSTDPEQQLRALIKAELISITGDTGAAMAVLVYEWFALSKEKQDYLLKMRNEYEQIWLDIIEKLRTQGKVKHDA
FIWRRLIGGAISWTVTWYKSEGKVKIDELTEMVWEMALK
>Mature_199_residues
MIATSIEQIPNIPCFDDSPRGRLLHGAAYLFHKQGYDKTTVRELAQFIGIQSGSLFHHFKSKDDILAHVMEQTIIYNLAR
LNDAATQSTDPEQQLRALIKAELISITGDTGAAMAVLVYEWFALSKEKQDYLLKMRNEYEQIWLDIIEKLRTQGKVKHDA
FIWRRLIGGAISWTVTWYKSEGKVKIDELTEMVWEMALK

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22919; Mature: 22919

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATSIEQIPNIPCFDDSPRGRLLHGAAYLFHKQGYDKTTVRELAQFIGIQSGSLFHHFK
CCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHC
SKDDILAHVMEQTIIYNLARLNDAATQSTDPEQQLRALIKAELISITGDTGAAMAVLVYE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
WFALSKEKQDYLLKMRNEYEQIWLDIIEKLRTQGKVKHDAFIWRRLIGGAISWTVTWYKS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHEEEEEEEEC
EGKVKIDELTEMVWEMALK
CCCEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MIATSIEQIPNIPCFDDSPRGRLLHGAAYLFHKQGYDKTTVRELAQFIGIQSGSLFHHFK
CCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHC
SKDDILAHVMEQTIIYNLARLNDAATQSTDPEQQLRALIKAELISITGDTGAAMAVLVYE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
WFALSKEKQDYLLKMRNEYEQIWLDIIEKLRTQGKVKHDAFIWRRLIGGAISWTVTWYKS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHEEEEEEEEC
EGKVKIDELTEMVWEMALK
CCCEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA