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The map label for this gene is yxkH [H]

Identifier: 213157914

GI number: 213157914

Start: 3513827

End: 3514582

Strand: Reverse

Name: yxkH [H]

Synonym: AB57_3406

Alternate gene names: 213157914

Gene position: 3514582-3513827 (Counterclockwise)

Preceding gene: 213157915

Following gene: 213157913

Centisome position: 86.77

GC content: 39.42

Gene sequence:

>756_bases
ATGATGTGGTTTTTGTACGTTGCGGTAGGCCTGCTAGCACTTGCTGCACTGTTATATGTGCTGGGTAATTATACATTCTG
GCTTCCGTTTCGTTCGAGTAAACTACCTCGCATTGTGATGTTACATCAGGTCACTCCTAAAGATGCTGCTTCTGGCATGA
ATATGCCTCCTGAAAAGTTTGAACAACTCTTAACGTTGTTAACGCGTAAAGGTGCTATCTTTTGCTTTGTTTCTGAGCTT
GAACAATATCGTAATCAAAAGAATGTGGTTGCTTTAAGTTTTGATGATGGCTTTATGGATAATTATCTTTATGCCTATCC
ACTACTCAAAAAATATAACGCGAAAGCAACTATTTATTTAGCAACGCAAATTGAAGGCATCGAAAAGCTCACTCATGAGC
AAATCCATGAAATGGCCAACTCTGGTTTAATTGAATTTGGTGCGCATACTCAACATCATGTGAACTTACTTAAACTTGAT
GACCAAACCGCTTATGACGAAATGCTTCAGTCTAAGCGTGATGTTGAAGCATTAGTTGGGAAGTGCCCGAGTTTTGCTTA
TCCATTTGGTCGATTTAACGAAAAGCACCAGAAAATGGCCCAAGAGATTGGCTTTAAAAACGCAGTATCGACTCGTAAAA
AAATTGAAGCTTACGAAGCAGATAACCAATTTAATATTCCACGTGTTAGCACGCATGGAGCCATGAATGCTTTACAGATG
CGTATCGCCCTTGCTAAAGGACGTTATAAGTTATGA

Upstream 100 bases:

>100_bases
GTAAGTCTTTCAATGCTAAACGTATCACCCAGTTTATGGTTGAAGTGACATTTAAGCAGCCCCTTTCAGAAGATTATGAA
TGGTCACATGAGGTTTATGC

Downstream 100 bases:

>100_bases
ATAAAATTCCATGTAGTGTCTATATTGTTACTTTAAACTGTGGCGCTTGGTTAGAGCGAACTTTACAAAGTGTCAGTGAG
TTTGATGAAGTCATTATTTT

Product: putative polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MMWFLYVAVGLLALAALLYVLGNYTFWLPFRSSKLPRIVMLHQVTPKDAASGMNMPPEKFEQLLTLLTRKGAIFCFVSEL
EQYRNQKNVVALSFDDGFMDNYLYAYPLLKKYNAKATIYLATQIEGIEKLTHEQIHEMANSGLIEFGAHTQHHVNLLKLD
DQTAYDEMLQSKRDVEALVGKCPSFAYPFGRFNEKHQKMAQEIGFKNAVSTRKKIEAYEADNQFNIPRVSTHGAMNALQM
RIALAKGRYKL

Sequences:

>Translated_251_residues
MMWFLYVAVGLLALAALLYVLGNYTFWLPFRSSKLPRIVMLHQVTPKDAASGMNMPPEKFEQLLTLLTRKGAIFCFVSEL
EQYRNQKNVVALSFDDGFMDNYLYAYPLLKKYNAKATIYLATQIEGIEKLTHEQIHEMANSGLIEFGAHTQHHVNLLKLD
DQTAYDEMLQSKRDVEALVGKCPSFAYPFGRFNEKHQKMAQEIGFKNAVSTRKKIEAYEADNQFNIPRVSTHGAMNALQM
RIALAKGRYKL
>Mature_251_residues
MMWFLYVAVGLLALAALLYVLGNYTFWLPFRSSKLPRIVMLHQVTPKDAASGMNMPPEKFEQLLTLLTRKGAIFCFVSEL
EQYRNQKNVVALSFDDGFMDNYLYAYPLLKKYNAKATIYLATQIEGIEKLTHEQIHEMANSGLIEFGAHTQHHVNLLKLD
DQTAYDEMLQSKRDVEALVGKCPSFAYPFGRFNEKHQKMAQEIGFKNAVSTRKKIEAYEADNQFNIPRVSTHGAMNALQM
RIALAKGRYKL

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 28742; Mature: 28742

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMWFLYVAVGLLALAALLYVLGNYTFWLPFRSSKLPRIVMLHQVTPKDAASGMNMPPEKF
CHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCHHHHCCCCCCHHHH
EQLLTLLTRKGAIFCFVSELEQYRNQKNVVALSFDDGFMDNYLYAYPLLKKYNAKATIYL
HHHHHHHHHCCCCEEEHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEE
ATQIEGIEKLTHEQIHEMANSGLIEFGAHTQHHVNLLKLDDQTAYDEMLQSKRDVEALVG
EEHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
KCPSFAYPFGRFNEKHQKMAQEIGFKNAVSTRKKIEAYEADNQFNIPRVSTHGAMNALQM
CCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
RIALAKGRYKL
HHHHHCCCCCC
>Mature Secondary Structure
MMWFLYVAVGLLALAALLYVLGNYTFWLPFRSSKLPRIVMLHQVTPKDAASGMNMPPEKF
CHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCHHHHCCCCCCHHHH
EQLLTLLTRKGAIFCFVSELEQYRNQKNVVALSFDDGFMDNYLYAYPLLKKYNAKATIYL
HHHHHHHHHCCCCEEEHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEE
ATQIEGIEKLTHEQIHEMANSGLIEFGAHTQHHVNLLKLDDQTAYDEMLQSKRDVEALVG
EEHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
KCPSFAYPFGRFNEKHQKMAQEIGFKNAVSTRKKIEAYEADNQFNIPRVSTHGAMNALQM
CCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
RIALAKGRYKL
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]