Click here to switch to the map view.

The map label for this gene is accD [H]

Identifier: 213157882

GI number: 213157882

Start: 3477786

End: 3478682

Strand: Reverse

Name: accD [H]

Synonym: AB57_3372

Alternate gene names: 213157882

Gene position: 3478682-3477786 (Counterclockwise)

Preceding gene: 213157883

Following gene: 213157881

Centisome position: 85.88

GC content: 42.47

Gene sequence:

>897_bases
ATGAATCAAGAAGTGAAATCAGGGAAAGTTCTTAGCCCTTCGACGCCATGGACACAGCGTCCAGTTCCAGGTATTGAAGT
TGCAGATGAGCAACAGACTCTCAAAGCAACATTTACTGAGCCAACTATTGAGTGCCCTGAATGTCATGCTTTAGTGACAC
GTACAGCAATATCTTTTAATGCGTATGTATGTCCACAGTGTGACGAACACTTACGAATGAAAGCTCGCGATCGCTTAAAC
TGGTTCTTCGACAATGTTGTGGCTGAATTAGGTCAAGAGTTTAGCGCGAAAGACCCATTAAAGTTTGTTGATAGCAAACC
GTATCCAGATCGTATGCGTGAAGCGCAAACTAAAACTGGTGAAACGGAAGCTTTAATTGCCATGCAAGGTAACTTAAATG
GCGTAGATATGATTGCATGTGCTTTTGAGTTCGACTTTATGGGCGGCTCAATGGGTACTGTAGTAGGTGACCGTTTTGTT
AAGGCAGCTGAACTTGCAATTGAAAAACGTCAGCCATTAATCTGCTTTGCAGCTTCTGGTGGTGCACGTATGCAAGAAGG
TATGTTGTCACTTATGCAAATGGCGCGTACTTCTGCTGCAATCCAAAAATTAAAAGATGCAGGCTTACCTTATATCGTGG
TGTTAACACATCCGGTATATGGCGGTGTAACAGCTTCTTTAGCAATGTTGGGTGATATCCATATTGCAGAACCTAAAGCA
ATGATTGGCTTTGCCGGTAAACGTGTGATTGAACAAACTGTACGTGAAACACTAGAAGAACCGTTCCAACGTGCAGAATA
TCTGCTTGATCATGGTGTGGTCGATCAGATTGTTCATCGTCATGCTTTACGTGATACTGTATCTCGTCTTGTATCAAAAT
TGATGAACTTACCTTGA

Upstream 100 bases:

>100_bases
GTGCTTTCGTTAAATCTTTTGCAACGTTGGCAGCTGATGAAGCTGTTGAACAGACGGTGAATAAAGTCAAGGAGCTTCGA
GCAGCGCTCGATGAGTTAGT

Downstream 100 bases:

>100_bases
AACAACAAGCTCCACTTTCAACAGACTCTTTAGATACATGGCTCAATTATTGGAGCCATGTTCACGTTACAGGGATCGAT
CTTGGTCTGGAACGTGTTAT

Product: acetyl-CoA carboxylase, carboxyl transferase, beta subunit

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MNQEVKSGKVLSPSTPWTQRPVPGIEVADEQQTLKATFTEPTIECPECHALVTRTAISFNAYVCPQCDEHLRMKARDRLN
WFFDNVVAELGQEFSAKDPLKFVDSKPYPDRMREAQTKTGETEALIAMQGNLNGVDMIACAFEFDFMGGSMGTVVGDRFV
KAAELAIEKRQPLICFAASGGARMQEGMLSLMQMARTSAAIQKLKDAGLPYIVVLTHPVYGGVTASLAMLGDIHIAEPKA
MIGFAGKRVIEQTVRETLEEPFQRAEYLLDHGVVDQIVHRHALRDTVSRLVSKLMNLP

Sequences:

>Translated_298_residues
MNQEVKSGKVLSPSTPWTQRPVPGIEVADEQQTLKATFTEPTIECPECHALVTRTAISFNAYVCPQCDEHLRMKARDRLN
WFFDNVVAELGQEFSAKDPLKFVDSKPYPDRMREAQTKTGETEALIAMQGNLNGVDMIACAFEFDFMGGSMGTVVGDRFV
KAAELAIEKRQPLICFAASGGARMQEGMLSLMQMARTSAAIQKLKDAGLPYIVVLTHPVYGGVTASLAMLGDIHIAEPKA
MIGFAGKRVIEQTVRETLEEPFQRAEYLLDHGVVDQIVHRHALRDTVSRLVSKLMNLP
>Mature_298_residues
MNQEVKSGKVLSPSTPWTQRPVPGIEVADEQQTLKATFTEPTIECPECHALVTRTAISFNAYVCPQCDEHLRMKARDRLN
WFFDNVVAELGQEFSAKDPLKFVDSKPYPDRMREAQTKTGETEALIAMQGNLNGVDMIACAFEFDFMGGSMGTVVGDRFV
KAAELAIEKRQPLICFAASGGARMQEGMLSLMQMARTSAAIQKLKDAGLPYIVVLTHPVYGGVTASLAMLGDIHIAEPKA
MIGFAGKRVIEQTVRETLEEPFQRAEYLLDHGVVDQIVHRHALRDTVSRLVSKLMNLP

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family [H]

Homologues:

Organism=Escherichia coli, GI1788655, Length=268, Percent_Identity=56.3432835820896, Blast_Score=306, Evalue=1e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =6.4.1.2 [H]

Molecular weight: Translated: 32973; Mature: 32973

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQEVKSGKVLSPSTPWTQRPVPGIEVADEQQTLKATFTEPTIECPECHALVTRTAISFN
CCCCCCCCCEECCCCCCCCCCCCCCEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
AYVCPQCDEHLRMKARDRLNWFFDNVVAELGQEFSAKDPLKFVDSKPYPDRMREAQTKTG
CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHCCCC
ETEALIAMQGNLNGVDMIACAFEFDFMGGSMGTVVGDRFVKAAELAIEKRQPLICFAASG
CCEEEEEEECCCCCHHHEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
GARMQEGMLSLMQMARTSAAIQKLKDAGLPYIVVLTHPVYGGVTASLAMLGDIHIAEPKA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCEEECCCHH
MIGFAGKRVIEQTVRETLEEPFQRAEYLLDHGVVDQIVHRHALRDTVSRLVSKLMNLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNQEVKSGKVLSPSTPWTQRPVPGIEVADEQQTLKATFTEPTIECPECHALVTRTAISFN
CCCCCCCCCEECCCCCCCCCCCCCCEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
AYVCPQCDEHLRMKARDRLNWFFDNVVAELGQEFSAKDPLKFVDSKPYPDRMREAQTKTG
CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHCCCC
ETEALIAMQGNLNGVDMIACAFEFDFMGGSMGTVVGDRFVKAAELAIEKRQPLICFAASG
CCEEEEEEECCCCCHHHEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
GARMQEGMLSLMQMARTSAAIQKLKDAGLPYIVVLTHPVYGGVTASLAMLGDIHIAEPKA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCEEECCCHH
MIGFAGKRVIEQTVRETLEEPFQRAEYLLDHGVVDQIVHRHALRDTVSRLVSKLMNLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA