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The map label for this gene is yqfA [H]

Identifier: 213157873

GI number: 213157873

Start: 3467284

End: 3467913

Strand: Direct

Name: yqfA [H]

Synonym: AB57_3363

Alternate gene names: 213157873

Gene position: 3467284-3467913 (Clockwise)

Preceding gene: 213157871

Following gene: 213157874

Centisome position: 85.6

GC content: 36.83

Gene sequence:

>630_bases
GTGTTAGAAACCTACGACCCAAAAGAAGAACTTTTTAATGCCTACAGCCATGGCGCTGGTGTGATTATGGCAGTAGTTGC
CTCTGTCTTTTTAATTATAAAAGGATCTTATCTTTCCACTGCCCAGTGGATAGGTTTATGGGTATATGCTTTTAGCTTAA
TTCTCGTGTTTACTAGTTCGACTCTCTATCATTTTGCACAAACACAAAATTTACGTTACTGGTATAAAAAACTCGATCAC
ACGGCTATTTATTATTTAATTGCTGGAACATATACCCCGTTCTTAAGTATTGCTATACCTACACAAAAAGCTCATATTTT
ACTTATTGCGCTCTGGAGCATTGCTGCAATTGGTACACTTTTCAAGTTAGTTTTTATTCACCGTTTTCAGAAAATTTCGC
TACTTGCTTATGTCCTTATGGGTTGGCTTGCCGTTTTTGTAATGGATGATATGCGAACCTATTTAAGCAAAGATACTTTG
ATGTTATTGATTACTGGAGGTTTAGCTTACACCGTTGGAGCATTGTTTTACGCGTTAAAAAAGGTAAGATATACCCATGC
GATATGGCATATTTTTGTGCTTTTAGGTGCAGGTGCACACTTTCTTGCTATCTATTGGTACGTTGTTTAG

Upstream 100 bases:

>100_bases
GTTTAAAGGGTATAGGATTAAAAATAAAATAACTTTACGACTGTTTTGTATTTCTATACATTTGTATTTTTAATCAAAAA
ATAAACTTATGAGTAAATCG

Downstream 100 bases:

>100_bases
TCCATTTTTCACTCATATTCAGTGATCCTGAAAGAGTCATGGATGATGTTCTTTCACGCTATTCTTTTAAGAAAAATATG
CCTTTAAAGAGAATAGTAAA

Product: hemolysin-3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MLETYDPKEELFNAYSHGAGVIMAVVASVFLIIKGSYLSTAQWIGLWVYAFSLILVFTSSTLYHFAQTQNLRYWYKKLDH
TAIYYLIAGTYTPFLSIAIPTQKAHILLIALWSIAAIGTLFKLVFIHRFQKISLLAYVLMGWLAVFVMDDMRTYLSKDTL
MLLITGGLAYTVGALFYALKKVRYTHAIWHIFVLLGAGAHFLAIYWYVV

Sequences:

>Translated_209_residues
MLETYDPKEELFNAYSHGAGVIMAVVASVFLIIKGSYLSTAQWIGLWVYAFSLILVFTSSTLYHFAQTQNLRYWYKKLDH
TAIYYLIAGTYTPFLSIAIPTQKAHILLIALWSIAAIGTLFKLVFIHRFQKISLLAYVLMGWLAVFVMDDMRTYLSKDTL
MLLITGGLAYTVGALFYALKKVRYTHAIWHIFVLLGAGAHFLAIYWYVV
>Mature_209_residues
MLETYDPKEELFNAYSHGAGVIMAVVASVFLIIKGSYLSTAQWIGLWVYAFSLILVFTSSTLYHFAQTQNLRYWYKKLDH
TAIYYLIAGTYTPFLSIAIPTQKAHILLIALWSIAAIGTLFKLVFIHRFQKISLLAYVLMGWLAVFVMDDMRTYLSKDTL
MLLITGGLAYTVGALFYALKKVRYTHAIWHIFVLLGAGAHFLAIYWYVV

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=216, Percent_Identity=29.1666666666667, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI52630445, Length=214, Percent_Identity=28.9719626168224, Blast_Score=87, Evalue=7e-18,
Organism=Homo sapiens, GI154759277, Length=241, Percent_Identity=26.5560165975104, Blast_Score=80, Evalue=1e-15,
Organism=Escherichia coli, GI1789266, Length=208, Percent_Identity=44.2307692307692, Blast_Score=176, Evalue=7e-46,
Organism=Caenorhabditis elegans, GI71996356, Length=228, Percent_Identity=34.6491228070175, Blast_Score=97, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24640324, Length=226, Percent_Identity=29.646017699115, Blast_Score=85, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 23862; Mature: 23862

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLETYDPKEELFNAYSHGAGVIMAVVASVFLIIKGSYLSTAQWIGLWVYAFSLILVFTSS
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
TLYHFAQTQNLRYWYKKLDHTAIYYLIAGTYTPFLSIAIPTQKAHILLIALWSIAAIGTL
HHHHHHHHCCHHHHHHHHCCHHEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
FKLVFIHRFQKISLLAYVLMGWLAVFVMDDMRTYLSKDTLMLLITGGLAYTVGALFYALK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
KVRYTHAIWHIFVLLGAGAHFLAIYWYVV
HHHHHHHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MLETYDPKEELFNAYSHGAGVIMAVVASVFLIIKGSYLSTAQWIGLWVYAFSLILVFTSS
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
TLYHFAQTQNLRYWYKKLDHTAIYYLIAGTYTPFLSIAIPTQKAHILLIALWSIAAIGTL
HHHHHHHHCCHHHHHHHHCCHHEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
FKLVFIHRFQKISLLAYVLMGWLAVFVMDDMRTYLSKDTLMLLITGGLAYTVGALFYALK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
KVRYTHAIWHIFVLLGAGAHFLAIYWYVV
HHHHHHHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]