Click here to switch to the map view.

The map label for this gene is pilH [H]

Identifier: 213157830

GI number: 213157830

Start: 3420069

End: 3420431

Strand: Reverse

Name: pilH [H]

Synonym: AB57_3314

Alternate gene names: 213157830

Gene position: 3420431-3420069 (Counterclockwise)

Preceding gene: 213157831

Following gene: 213157829

Centisome position: 84.44

GC content: 40.77

Gene sequence:

>363_bases
ATGGCACGTATTCTCATTGTTGATGACTCACCAACAGAAACTTTTCGTTTTAAAGAAATCCTAACTAAGCATGGCTATGA
CGTACTTGAAGCATCTAACGGTGCAGATGGTGTGACTTTGGCAAAAGCTGAGCAGCCTGACTTGGTATTAATGGATGTGG
TCATGCCAGGTGTAAATGGTTTTCAGGCAACGCGCCAGATTACCCGTGATGAAGACACGAAGCATATTCCAGTGGTGATT
GTGAGTACTAAAGATCAGGCAACTGACCGAGTATGGGGTAAACGTCAAGGCGCAATCGATTACTTAATCAAGCCAATCGA
AGAAAAGCAATTAATTGATGTAATTAAACAATTTCTAAATTAA

Upstream 100 bases:

>100_bases
GTTCAGATGAATACTTGACGAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAATAA
GTAATTTGAGGGCAAAAGAA

Downstream 100 bases:

>100_bases
CTCATCCATCCATAAAAACATAAATAACGGGATAAATACGCCCGTTTTATAGGATCGAGTATGGCAGCGAATGGATTTAT
CGAGTTACTTCGTTTGTCTA

Product: type IV pilus response regulator protein PilH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MARILIVDDSPTETFRFKEILTKHGYDVLEASNGADGVTLAKAEQPDLVLMDVVMPGVNGFQATRQITRDEDTKHIPVVI
VSTKDQATDRVWGKRQGAIDYLIKPIEEKQLIDVIKQFLN

Sequences:

>Translated_120_residues
MARILIVDDSPTETFRFKEILTKHGYDVLEASNGADGVTLAKAEQPDLVLMDVVMPGVNGFQATRQITRDEDTKHIPVVI
VSTKDQATDRVWGKRQGAIDYLIKPIEEKQLIDVIKQFLN
>Mature_119_residues
ARILIVDDSPTETFRFKEILTKHGYDVLEASNGADGVTLAKAEQPDLVLMDVVMPGVNGFQATRQITRDEDTKHIPVVIV
STKDQATDRVWGKRQGAIDYLIKPIEEKQLIDVIKQFLN

Specific function: May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=33.0508474576271, Blast_Score=73, Evalue=4e-15,
Organism=Escherichia coli, GI1787229, Length=116, Percent_Identity=31.8965517241379, Blast_Score=69, Evalue=1e-13,
Organism=Escherichia coli, GI1788394, Length=118, Percent_Identity=33.0508474576271, Blast_Score=68, Evalue=2e-13,
Organism=Escherichia coli, GI87082012, Length=114, Percent_Identity=29.8245614035088, Blast_Score=67, Evalue=4e-13,
Organism=Escherichia coli, GI1790863, Length=108, Percent_Identity=31.4814814814815, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1788550, Length=117, Percent_Identity=31.6239316239316, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI1786784, Length=117, Percent_Identity=30.7692307692308, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI1788905, Length=114, Percent_Identity=31.5789473684211, Blast_Score=61, Evalue=2e-11,
Organism=Escherichia coli, GI1789809, Length=117, Percent_Identity=28.2051282051282, Blast_Score=60, Evalue=5e-11,
Organism=Escherichia coli, GI1788713, Length=117, Percent_Identity=34.1880341880342, Blast_Score=59, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 13480; Mature: 13348

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARILIVDDSPTETFRFKEILTKHGYDVLEASNGADGVTLAKAEQPDLVLMDVVMPGVNG
CEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCEEEEEEECCCCCC
FQATRQITRDEDTKHIPVVIVSTKDQATDRVWGKRQGAIDYLIKPIEEKQLIDVIKQFLN
HHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHC
>Mature Secondary Structure 
ARILIVDDSPTETFRFKEILTKHGYDVLEASNGADGVTLAKAEQPDLVLMDVVMPGVNG
EEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCEEEEEEECCCCCC
FQATRQITRDEDTKHIPVVIVSTKDQATDRVWGKRQGAIDYLIKPIEEKQLIDVIKQFLN
HHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7908398; 10984043 [H]