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The map label for this gene is ycaP [H]

Identifier: 213157540

GI number: 213157540

Start: 2314059

End: 2314736

Strand: Direct

Name: ycaP [H]

Synonym: AB57_2229

Alternate gene names: 213157540

Gene position: 2314059-2314736 (Clockwise)

Preceding gene: 213157520

Following gene: 213157544

Centisome position: 57.13

GC content: 36.87

Gene sequence:

>678_bases
ATGGATCTTTCTAATATTCTTATAGGTGACACAACGTGGTCCTTTGTTTTAGAAATTTTGGTCCGTTGTACCATCATGTT
TATCATTATCATTAGTTTTCTAAGGCTATCTGGTAAACGTGGTATTCGGCAACTCTCCTTATTTGAACTTGCCATTATTT
TATGTTTAGGTTCTGCTGCTGGCGATCCTATGTTTACTAAGGATTTACCGATTGCCCATGCATTGATAGCTTTTATCGCT
ATTCTTTCTCTATATCGCCTGGTCACTTGGGGCATGGTAAAACATAAAAAAATTGAAGACTTATTAGAAGGAAAAGCGCT
CTGTGTCGTTAAAGAAGGCCTTTTAGTCTACAAAGATTTCCAAAAACAGACTTATTCTCATGATGAGTTTTTTTCGGAAA
TGCGCCAACAAAACGTTGAACATTTAGGCCAAGTCAGAACAGCCCTGCTTGAATCAGATGGTATTCTGAGCTTGCTTTAT
TATGAAGATGAAGATGTCAAATGGGGACTTCCTTTATTCCCTGATGCTTATCGTAAAGCAGAAGTTCTTAAAATTAATAC
TTTTTATTCCTGTATGAAATGTGGCGAAACTAAAATTTTAAATAAGCTAGATCAAGAATGCTCTCGTTGTCATCACCACA
GTTGGGCTGAATCTTTAAAAACCCGGCGCTTAGGGTAA

Upstream 100 bases:

>100_bases
TTTTTAACCAATAACCACTTAAAAAGTATATTTTTTTAATTTTATTCTGATATGAATTTTAAATGTATTTTTTATACATA
TTTAAACAAGTGAGAAAAAG

Downstream 100 bases:

>100_bases
ATAAAAAAGTGCTATTTCTAACACTTAGAAATAGCACTTATATTTAAATATTAATTTTTCATCAATATTTAAATAAATAA
AACTTTATTCAAAAGATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MDLSNILIGDTTWSFVLEILVRCTIMFIIIISFLRLSGKRGIRQLSLFELAIILCLGSAAGDPMFTKDLPIAHALIAFIA
ILSLYRLVTWGMVKHKKIEDLLEGKALCVVKEGLLVYKDFQKQTYSHDEFFSEMRQQNVEHLGQVRTALLESDGILSLLY
YEDEDVKWGLPLFPDAYRKAEVLKINTFYSCMKCGETKILNKLDQECSRCHHHSWAESLKTRRLG

Sequences:

>Translated_225_residues
MDLSNILIGDTTWSFVLEILVRCTIMFIIIISFLRLSGKRGIRQLSLFELAIILCLGSAAGDPMFTKDLPIAHALIAFIA
ILSLYRLVTWGMVKHKKIEDLLEGKALCVVKEGLLVYKDFQKQTYSHDEFFSEMRQQNVEHLGQVRTALLESDGILSLLY
YEDEDVKWGLPLFPDAYRKAEVLKINTFYSCMKCGETKILNKLDQECSRCHHHSWAESLKTRRLG
>Mature_225_residues
MDLSNILIGDTTWSFVLEILVRCTIMFIIIISFLRLSGKRGIRQLSLFELAIILCLGSAAGDPMFTKDLPIAHALIAFIA
ILSLYRLVTWGMVKHKKIEDLLEGKALCVVKEGLLVYKDFQKQTYSHDEFFSEMRQQNVEHLGQVRTALLESDGILSLLY
YEDEDVKWGLPLFPDAYRKAEVLKINTFYSCMKCGETKILNKLDQECSRCHHHSWAESLKTRRLG

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=225, Percent_Identity=38.2222222222222, Blast_Score=177, Evalue=4e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 25822; Mature: 25822

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSNILIGDTTWSFVLEILVRCTIMFIIIISFLRLSGKRGIRQLSLFELAIILCLGSAA
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
GDPMFTKDLPIAHALIAFIAILSLYRLVTWGMVKHKKIEDLLEGKALCVVKEGLLVYKDF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHH
QKQTYSHDEFFSEMRQQNVEHLGQVRTALLESDGILSLLYYEDEDVKWGLPLFPDAYRKA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHCCH
EVLKINTFYSCMKCGETKILNKLDQECSRCHHHSWAESLKTRRLG
HHEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLSNILIGDTTWSFVLEILVRCTIMFIIIISFLRLSGKRGIRQLSLFELAIILCLGSAA
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
GDPMFTKDLPIAHALIAFIAILSLYRLVTWGMVKHKKIEDLLEGKALCVVKEGLLVYKDF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHH
QKQTYSHDEFFSEMRQQNVEHLGQVRTALLESDGILSLLYYEDEDVKWGLPLFPDAYRKA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHCCH
EVLKINTFYSCMKCGETKILNKLDQECSRCHHHSWAESLKTRRLG
HHEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]