BacMap

Definition	Acinetobacter baumannii AB0057, complete genome.
Accession	NC_011586
Length	4,050,513

Click here to switch to the map view.

The map label for this gene is vibA [H]

Identifier: 213157294

GI number: 213157294

Start: 2073889

End: 2074659

Strand: Direct

Name: vibA [H]

Synonym: AB57_1983

Alternate gene names: 213157294

Gene position: 2073889-2074659 (Clockwise)

Preceding gene: 213157293

Following gene: 213157295

Centisome position: 51.2

GC content: 43.32

Gene sequence:

>771_bases
ATGCGCTCTACCATCGTGGTCACAGGTGCTGCAAGAGGGATAGGAGCGGCTATCGCCAAGCAACTACTAGATCAGGGGTA
TCATGTTATTGGTATTGACTGTCAAAAAAATCCTGAACAATGGGATATCAGTAAAACAATGACGTCAGATCAATCTTCAC
AATGGCAAGGCATCTCACAAGACATTACCCATCAACAAGAAACACAAACTTTAATTTCAGAGCTGTTAGAAAAATACGAA
ATTACGGGGTTAGTAAATGCAGCAGGAGTATTAATTATGCGCTCCATGCTTGAAGCAAAAACGGAAGATTGGGAAACACT
TTTTGCGGTCAATGTCATGGCGCCTATCGCGATCAGCCAACAAGTTGCTAAACATTTTTGTGCAAAAAGGCGGGGTAGCA
TTGTCACTATTAGTTCAAATAGTGCGCGTATGCCACGTATGCAACTTGGTATGTACGCCACCACTAAGGCTGCACTAAGT
CATTTTTGTCGCAATCTGGCACTTGAAATCGCCCCTTATCAAGTCAGGCTGAATATCGTTTCACCTGGATCTACTCTCAC
TCAAATGCAGCAACAACTCTGGACAGATAATGCACCTCCACCTGCAGTAATTGATGGTGATTTGAGCCAGTATCGAACAG
GAATTCCATTAAGAAAACTCGCGCAACCAGATGATATTGCCAATACCGTGAGCTTTTTACTTTCGGACCGAGCGGCCCAA
ATTACTATGCAAGAAATAGTGATAGATGGAGGAGCTACACTTGGGGTTTAA

Upstream 100 bases:

>100_bases
TCATAATTTGAACTTTTATATCCATTTGCTCTTGATAAGAATGATAATTATTTGCAATTATATTTATAGATTTCTTTATA
ATATAAATTGGAGTATTCAC

Downstream 100 bases:

>100_bases
AGCTTACTTCAGCACAACAATACACTGAAATTAAAGAACAAATATTTTTAAAGATAGAATAGGAAAATACCAATGAGTAT
TCCAAAGATTGCAAGTTACA

Product: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MRSTIVVTGAARGIGAAIAKQLLDQGYHVIGIDCQKNPEQWDISKTMTSDQSSQWQGISQDITHQQETQTLISELLEKYE
ITGLVNAAGVLIMRSMLEAKTEDWETLFAVNVMAPIAISQQVAKHFCAKRRGSIVTISSNSARMPRMQLGMYATTKAALS
HFCRNLALEIAPYQVRLNIVSPGSTLTQMQQQLWTDNAPPPAVIDGDLSQYRTGIPLRKLAQPDDIANTVSFLLSDRAAQ
ITMQEIVIDGGATLGV

Sequences:

>Translated_256_residues
MRSTIVVTGAARGIGAAIAKQLLDQGYHVIGIDCQKNPEQWDISKTMTSDQSSQWQGISQDITHQQETQTLISELLEKYE
ITGLVNAAGVLIMRSMLEAKTEDWETLFAVNVMAPIAISQQVAKHFCAKRRGSIVTISSNSARMPRMQLGMYATTKAALS
HFCRNLALEIAPYQVRLNIVSPGSTLTQMQQQLWTDNAPPPAVIDGDLSQYRTGIPLRKLAQPDDIANTVSFLLSDRAAQ
ITMQEIVIDGGATLGV
>Mature_256_residues
MRSTIVVTGAARGIGAAIAKQLLDQGYHVIGIDCQKNPEQWDISKTMTSDQSSQWQGISQDITHQQETQTLISELLEKYE
ITGLVNAAGVLIMRSMLEAKTEDWETLFAVNVMAPIAISQQVAKHFCAKRRGSIVTISSNSARMPRMQLGMYATTKAALS
HFCRNLALEIAPYQVRLNIVSPGSTLTQMQQQLWTDNAPPPAVIDGDLSQYRTGIPLRKLAQPDDIANTVSFLLSDRAAQ
ITMQEIVIDGGATLGV

Specific function: Involved in an early step of the biosynthesis of the catechol siderophore vibriobactin. Vibriobactin is a chelating compound involved in transporting iron from the bacterial environment into the cell cytoplasm [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI5031737, Length=258, Percent_Identity=29.8449612403101, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI7705925, Length=248, Percent_Identity=28.2258064516129, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI32483357, Length=250, Percent_Identity=28.4, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI40254992, Length=256, Percent_Identity=27.734375, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI33667109, Length=182, Percent_Identity=34.0659340659341, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI15277342, Length=260, Percent_Identity=25.3846153846154, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI19923817, Length=256, Percent_Identity=26.171875, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI59889578, Length=198, Percent_Identity=29.2929292929293, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=22.3107569721116, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI109715829, Length=242, Percent_Identity=26.4462809917355, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI66933014, Length=195, Percent_Identity=25.1282051282051, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI226371731, Length=195, Percent_Identity=29.7435897435897, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI10190704, Length=250, Percent_Identity=23.6, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=39.6, Blast_Score=176, Evalue=1e-45,
Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=31.1740890688259, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=29.5719844357977, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1790717, Length=255, Percent_Identity=25.8823529411765, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI2367175, Length=252, Percent_Identity=26.5873015873016, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1788459, Length=256, Percent_Identity=26.5625, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=25, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI2367365, Length=248, Percent_Identity=27.0161290322581, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=29.0322580645161, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=24.4979919678715, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1789378, Length=258, Percent_Identity=26.3565891472868, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1787820, Length=182, Percent_Identity=26.9230769230769, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789057, Length=261, Percent_Identity=22.2222222222222, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=248, Percent_Identity=32.6612903225806, Blast_Score=116, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17561402, Length=249, Percent_Identity=32.9317269076305, Blast_Score=113, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=27.0161290322581, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI25147288, Length=251, Percent_Identity=28.2868525896414, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=28.7449392712551, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=25.7028112449799, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17560332, Length=271, Percent_Identity=30.9963099630996, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17538480, Length=259, Percent_Identity=28.957528957529, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI193204405, Length=263, Percent_Identity=29.277566539924, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17551412, Length=268, Percent_Identity=28.7313432835821, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=29.0566037735849, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=24.4, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=30.4182509505703, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17565030, Length=264, Percent_Identity=28.030303030303, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17562910, Length=258, Percent_Identity=29.0697674418605, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=28.3524904214559, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=263, Percent_Identity=28.5171102661597, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17560150, Length=265, Percent_Identity=27.9245283018868, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17562990, Length=258, Percent_Identity=28.6821705426357, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17508651, Length=257, Percent_Identity=24.9027237354086, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17560220, Length=263, Percent_Identity=27.7566539923954, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17544670, Length=266, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=25.7692307692308, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=269, Percent_Identity=27.5092936802974, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193207185, Length=151, Percent_Identity=33.112582781457, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17531453, Length=269, Percent_Identity=28.6245353159851, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=260, Percent_Identity=26.1538461538462, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6322227, Length=215, Percent_Identity=28.8372093023256, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322226, Length=216, Percent_Identity=28.7037037037037, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323882, Length=241, Percent_Identity=25.7261410788382, Blast_Score=69, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24643142, Length=257, Percent_Identity=31.5175097276265, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=28.4, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI21355319, Length=250, Percent_Identity=28, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=28, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=28.4, Blast_Score=87, Evalue=8e-18,
Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=28.4, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24584748, Length=187, Percent_Identity=28.3422459893048, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI161076933, Length=187, Percent_Identity=28.3422459893048, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=25.8064516129032, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28574402, Length=188, Percent_Identity=26.5957446808511, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24584744, Length=188, Percent_Identity=26.5957446808511, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24644337, Length=197, Percent_Identity=25.8883248730964, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24649181, Length=167, Percent_Identity=29.940119760479, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR003560
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.3.1.28 [H]

Molecular weight: Translated: 28001; Mature: 28001

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSTIVVTGAARGIGAAIAKQLLDQGYHVIGIDCQKNPEQWDISKTMTSDQSSQWQGISQ
CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCCHHCCCCHH
DITHQQETQTLISELLEKYEITGLVNAAGVLIMRSMLEAKTEDWETLFAVNVMAPIAISQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QVAKHFCAKRRGSIVTISSNSARMPRMQLGMYATTKAALSHFCRNLALEIAPYQVRLNIV
HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEE
SPGSTLTQMQQQLWTDNAPPPAVIDGDLSQYRTGIPLRKLAQPDDIANTVSFLLSDRAAQ
CCCHHHHHHHHHHHCCCCCCCCEECCCHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHH
ITMQEIVIDGGATLGV
HHHHHHEECCCCCCCC
>Mature Secondary Structure
MRSTIVVTGAARGIGAAIAKQLLDQGYHVIGIDCQKNPEQWDISKTMTSDQSSQWQGISQ
CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCCHHCCCCHH
DITHQQETQTLISELLEKYEITGLVNAAGVLIMRSMLEAKTEDWETLFAVNVMAPIAISQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QVAKHFCAKRRGSIVTISSNSARMPRMQLGMYATTKAALSHFCRNLALEIAPYQVRLNIV
HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEE
SPGSTLTQMQQQLWTDNAPPPAVIDGDLSQYRTGIPLRKLAQPDDIANTVSFLLSDRAAQ
CCCHHHHHHHHHHHCCCCCCCCEECCCHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHH
ITMQEIVIDGGATLGV
HHHHHHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371453; 10952301 [H]