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The map label for this gene is yhcM [H]

Identifier: 213157141

GI number: 213157141

Start: 1906916

End: 1908058

Strand: Direct

Name: yhcM [H]

Synonym: AB57_1824

Alternate gene names: 213157141

Gene position: 1906916-1908058 (Clockwise)

Preceding gene: 213157140

Following gene: 213157142

Centisome position: 47.08

GC content: 37.62

Gene sequence:

>1143_bases
ATGTTAAATTTAAAATCTTCTCATAGTACTGCATTTACTCCGTCTTCCCCAGCAGAGCGCTATGCTGAGGCATTGGCTTC
AGGCCAGTTTATGGCAGATGAGGCACAAGCACAGGCAGTGCAAGAATTAGATCGTGTATGGAAAGAACTTTTAAATCGTT
ATAAGGCTTCTAAAAAAGCTTTCCGTCGTTTCCGCCGCCAAACTTCTCCAAAAGGTGTATATATGTGGGGCGGTGTAGGG
CGTGGCAAAACTTGGCTTATGGACCAATTTTATGAGTCTGTACCATTTCGCCGTAAAACACGTATGCATTTTCATCACTT
TATGCAACATGTTCATAAAGAGTTAAATAAACTTTCGGGTCAACGTAATCCACTCGATATCGTAGCTGATCAAATTTATA
AAGATGCTGTCGTTATTTGTTTCGATGAGTTTTTTGTCTCGAACGTAACTGATGCAATGATTTTGAGTGACTTATTCCAA
AAGTTATTTGTTCGTGGTGTAACACTCATTGCAACTTCAAACATTGCACCAGACGGTTTATATAAAAACGGGATTCACCG
TGATCGTTTTATTCCTACAATTGAAATGGTTAAAAAGAACTGTGTCGTTTTAAATGTAGATGCAGGGGTGGATTACCGTT
TACGTGTTTTAAAACAAGCTCAATTGTTTAAATCACCATTAGGTAATGAAGCTCAAAGCTGGATATCAGAGCGTTATACT
GCTTTAACTCATACTCAAACCAATTCTCATGAACCGATTGTGATCAATAACCGTGTTGTTGAAACACTAGGGCATACGGA
AGATGTTTTATGGTGTGAGTTTTCTGAACTTTGCTTAAAGCCCCGTAGTCCAGCAGACTTTATTGAAATTGCCAATATTT
ATAATACGGTTTTAGTCAGTAATGTTCCTCACTTAACAGACTTCTTGTCTGAAGGCACACGTCGTTTTATTTATCTAGTC
GATGAATTTTATGATCGTGGAGTGAAACTACTTTTAACCTCTCAAGATAGTATTATTGATATCTATCAAGGCGAGAAATT
GGCTTTTGAAATTGAGCGTACTCGTTCACGTTTATTAGAAATGCAGTCAGATGAGTATTTGCATTCTGAACATCGACATA
TTGATGCGACTAAAACTTCTTAA

Upstream 100 bases:

>100_bases
GAAAAGAGTTTTACTGAGTGTAACTCTTGATGCTAAAAGCTAATGTGGTCGGACAAAATGTTCGCTATACTCTCTTCAGT
TAAAATTGAAATAAAATGAT

Downstream 100 bases:

>100_bases
GAAATCAGATATGAAGAGCGCTCTAAATTGAGCGCTTTTTTTACAACAAAAAAAGATAAATTTAGCGAAATAGTACTTTT
TCATTGTGCAAAGTTTGATA

Product: AFG1-family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MLNLKSSHSTAFTPSSPAERYAEALASGQFMADEAQAQAVQELDRVWKELLNRYKASKKAFRRFRRQTSPKGVYMWGGVG
RGKTWLMDQFYESVPFRRKTRMHFHHFMQHVHKELNKLSGQRNPLDIVADQIYKDAVVICFDEFFVSNVTDAMILSDLFQ
KLFVRGVTLIATSNIAPDGLYKNGIHRDRFIPTIEMVKKNCVVLNVDAGVDYRLRVLKQAQLFKSPLGNEAQSWISERYT
ALTHTQTNSHEPIVINNRVVETLGHTEDVLWCEFSELCLKPRSPADFIEIANIYNTVLVSNVPHLTDFLSEGTRRFIYLV
DEFYDRGVKLLLTSQDSIIDIYQGEKLAFEIERTRSRLLEMQSDEYLHSEHRHIDATKTS

Sequences:

>Translated_380_residues
MLNLKSSHSTAFTPSSPAERYAEALASGQFMADEAQAQAVQELDRVWKELLNRYKASKKAFRRFRRQTSPKGVYMWGGVG
RGKTWLMDQFYESVPFRRKTRMHFHHFMQHVHKELNKLSGQRNPLDIVADQIYKDAVVICFDEFFVSNVTDAMILSDLFQ
KLFVRGVTLIATSNIAPDGLYKNGIHRDRFIPTIEMVKKNCVVLNVDAGVDYRLRVLKQAQLFKSPLGNEAQSWISERYT
ALTHTQTNSHEPIVINNRVVETLGHTEDVLWCEFSELCLKPRSPADFIEIANIYNTVLVSNVPHLTDFLSEGTRRFIYLV
DEFYDRGVKLLLTSQDSIIDIYQGEKLAFEIERTRSRLLEMQSDEYLHSEHRHIDATKTS
>Mature_380_residues
MLNLKSSHSTAFTPSSPAERYAEALASGQFMADEAQAQAVQELDRVWKELLNRYKASKKAFRRFRRQTSPKGVYMWGGVG
RGKTWLMDQFYESVPFRRKTRMHFHHFMQHVHKELNKLSGQRNPLDIVADQIYKDAVVICFDEFFVSNVTDAMILSDLFQ
KLFVRGVTLIATSNIAPDGLYKNGIHRDRFIPTIEMVKKNCVVLNVDAGVDYRLRVLKQAQLFKSPLGNEAQSWISERYT
ALTHTQTNSHEPIVINNRVVETLGHTEDVLWCEFSELCLKPRSPADFIEIANIYNTVLVSNVPHLTDFLSEGTRRFIYLV
DEFYDRGVKLLLTSQDSIIDIYQGEKLAFEIERTRSRLLEMQSDEYLHSEHRHIDATKTS

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=429, Percent_Identity=31.2354312354312, Blast_Score=224, Evalue=1e-58,
Organism=Escherichia coli, GI1789627, Length=368, Percent_Identity=45.6521739130435, Blast_Score=353, Evalue=1e-98,
Organism=Caenorhabditis elegans, GI17505769, Length=434, Percent_Identity=30.4147465437788, Blast_Score=222, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6320783, Length=306, Percent_Identity=34.9673202614379, Blast_Score=157, Evalue=2e-39,
Organism=Drosophila melanogaster, GI20129913, Length=435, Percent_Identity=30.5747126436782, Blast_Score=192, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 43933; Mature: 43933

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLKSSHSTAFTPSSPAERYAEALASGQFMADEAQAQAVQELDRVWKELLNRYKASKKA
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRRFRRQTSPKGVYMWGGVGRGKTWLMDQFYESVPFRRKTRMHFHHFMQHVHKELNKLSG
HHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
QRNPLDIVADQIYKDAVVICFDEFFVSNVTDAMILSDLFQKLFVRGVTLIATSNIAPDGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCH
YKNGIHRDRFIPTIEMVKKNCVVLNVDAGVDYRLRVLKQAQLFKSPLGNEAQSWISERYT
HHCCCCHHHCCCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ALTHTQTNSHEPIVINNRVVETLGHTEDVLWCEFSELCLKPRSPADFIEIANIYNTVLVS
HHEECCCCCCCCEEECCHHHHHHCCCCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHC
NVPHLTDFLSEGTRRFIYLVDEFYDRGVKLLLTSQDSIIDIYQGEKLAFEIERTRSRLLE
CCHHHHHHHHCCHHHEEHHHHHHHCCCEEEEEECCCCEEEEECCCEEEEHHHHHHHHHHH
MQSDEYLHSEHRHIDATKTS
HCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLNLKSSHSTAFTPSSPAERYAEALASGQFMADEAQAQAVQELDRVWKELLNRYKASKKA
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRRFRRQTSPKGVYMWGGVGRGKTWLMDQFYESVPFRRKTRMHFHHFMQHVHKELNKLSG
HHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
QRNPLDIVADQIYKDAVVICFDEFFVSNVTDAMILSDLFQKLFVRGVTLIATSNIAPDGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCH
YKNGIHRDRFIPTIEMVKKNCVVLNVDAGVDYRLRVLKQAQLFKSPLGNEAQSWISERYT
HHCCCCHHHCCCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ALTHTQTNSHEPIVINNRVVETLGHTEDVLWCEFSELCLKPRSPADFIEIANIYNTVLVS
HHEECCCCCCCCEEECCHHHHHHCCCCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHC
NVPHLTDFLSEGTRRFIYLVDEFYDRGVKLLLTSQDSIIDIYQGEKLAFEIERTRSRLLE
CCHHHHHHHHCCHHHEEHHHHHHHCCCEEEEEECCCCEEEEECCCEEEEHHHHHHHHHHH
MQSDEYLHSEHRHIDATKTS
HCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]