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The map label for this gene is kdsB [H]

Identifier: 213157118

GI number: 213157118

Start: 1889131

End: 1889271

Strand: Direct

Name: kdsB [H]

Synonym: AB57_1801

Alternate gene names: 213157118

Gene position: 1889131-1889271 (Clockwise)

Preceding gene: 213157117

Following gene: 213157119

Centisome position: 46.64

GC content: 41.84

Gene sequence:

>141_bases
ATGAAACATATCGTCATTCCAGCACGCTTCTCAAGTTCGCGTTTGCCAGGTAAGCCATTGTTACTTATTCATGATCGTCC
TATGATTTTACGAGTGGTGGACCAAGCAAAAAAGTTGAAGGTTTCGATGACCTATGTGTAG

Upstream 100 bases:

>100_bases
TTGGGTTGTGCCAGTTAAAGCTGTTTTGTCTACAGAGTGCTATCAGGTTTTAAATCAACAATTGCAAAAGCTTGATATTC
AAATATCTTAGGAAGAAAAA

Downstream 100 bases:

>100_bases
CAACGGACGATGAACGTATCGCTGAAATATGTTGTGCAGAGGGCGTTGATGTTGTTTTAACAAGTGCAGACCATCCATCG
GGAACAGATCGTTTAAGTGA

Product: 3-deoxy-manno-octulosonate cytidylyltransferase

Products: NA

Alternate protein names: CMP-2-keto-3-deoxyoctulosonic acid synthase; CKS; CMP-KDO synthase [H]

Number of amino acids: Translated: 46; Mature: 46

Protein sequence:

>46_residues
MKHIVIPARFSSSRLPGKPLLLIHDRPMILRVVDQAKKLKVSMTYV

Sequences:

>Translated_46_residues
MKHIVIPARFSSSRLPGKPLLLIHDRPMILRVVDQAKKLKVSMTYV
>Mature_46_residues
MKHIVIPARFSSSRLPGKPLLLIHDRPMILRVVDQAKKLKVSMTYV

Specific function: Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria [H]

COG id: COG1212

COG function: function code M; CMP-2-keto-3-deoxyoctulosonic acid synthetase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003329
- InterPro:   IPR004528 [H]

Pfam domain/function: PF02348 CTP_transf_3 [H]

EC number: =2.7.7.38 [H]

Molecular weight: Translated: 5285; Mature: 5285

Theoretical pI: Translated: 11.71; Mature: 11.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHIVIPARFSSSRLPGKPLLLIHDRPMILRVVDQAKKLKVSMTYV
CCEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEEEEC
>Mature Secondary Structure
MKHIVIPARFSSSRLPGKPLLLIHDRPMILRVVDQAKKLKVSMTYV
CCEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA