Click here to switch to the map view.

The map label for this gene is soxC [H]

Identifier: 213156992

GI number: 213156992

Start: 1756398

End: 1757693

Strand: Direct

Name: soxC [H]

Synonym: AB57_1670

Alternate gene names: 213156992

Gene position: 1756398-1757693 (Clockwise)

Preceding gene: 213156991

Following gene: 213156993

Centisome position: 43.36

GC content: 42.36

Gene sequence:

>1296_bases
ATGACAAATTTAAATTTTGAGCATCATCTCGGTTCATTAACTCACGCTGCACTGAGTCAGGCTACAATCATTTCGCGGGT
ATGGGGTGAAGGACCTTCTGAACGGTATGATGAATTGGCAAGTAACTTCAGACCGACTTTTGCCCGTATTAAAGAAGGGG
CTTTAATCCGTGAGCAGCAGCATATTTTGCCGTATGAGCAACTTCAGTGGCTCAAAGATATTGGTTTTACACGGTTACGA
CTTCCTAAAGCTCATGGTGGTTTTGATGCAACTATTCCTGAACTATTTGCATTGCTCATTGAACTTGCAGAAGCCGACTC
AAACTTACCGCAAGCTTTGCGTGTGCATTTTGGTTTTACTGAAGATGTCTTGGTGAGTAAAGATAAGGCATTCCAGCAGC
GTTGGATTAGTCGAATTGCAAATGGCGAAACAGTGGGTAGTGCATGGTCCGAAGGGGGGAAAGAGTCAATCGATCAGTTT
GAAACTCACTTATATCGAGACAGTGACGGAAAAATTCGCGTTAAAGGTAAAAAATACTACACCACAGGGAGTCTATATGC
AGACTGGGTGGATGTTGGGGTAACAGATTTAAAAGGAGAGTCTGGCTCAGTTGTTGTTCGCCGTGAAGATGAAGGCGTTG
AAATTGTCGATGACTGGAATGGTTTTGGTCAGCAGCTTACTGCAAGTGGTACGGCATATTTCCACGATGTATTGGTCGAT
GAAGCTGAAATTTTACCTGACGATGACCGTTTTAAATATTCGGCTGCTTACTATCAATTGGTCCAACTGGCAATTATTAC
AGGTCTAGGGCGTGCTGCAACCTATGATGTTTCTCAAGCTGTTGCGAAACGTACCCGAAACTACACGCATGCAAATGCCC
AATTTGTAAAACAGGATCCGCAAATTTTACAAGTAGTAGGACAAATTCGTGGCGCGGCTTATAGTGCAGGAGCGATTGTT
GAAAAAGTTGCACAAAGCTTACAGCGTGCTTACTTAGCTGCATTTCAAAATAATGAGCAGCTTGAAGAAGAACAAAATGC
ACTTGCCGAGCTTGAAAGTGCGCAGTCTCAAACGGTCATTACCGATCTAATTTTAAATGCTTCCACGATTTTATTTGACG
CTTTAGGTGCTTCTGCAACAGACAAAGATTTAGGTCTAGATCGATATTGGCGTAATGTACGAACTCTAGCTTCACATAAC
CCGAGAGTATTTAAAAATCGAATTGTAGGTGATTTTAGTGTGAACGGCACATTACCACCGTATCAATGGCGAATTGGTGA
AGTTTCTAAACAATAA

Upstream 100 bases:

>100_bases
TGGTGTTATATCAAGATTGAATACTGTTATAAAAAAATAATCGTTTTCATGTGAAATAAATATTTTATGGTAAAAGCAAA
GCAATATTGGTTTTACTTAC

Downstream 100 bases:

>100_bases
ATTATAGTTTTAGATATTAAGCTGCTATTTTTAGCGGCTTAATGTTATTTATATTTTTAAAATAAATTATAAAAATCTAT
TAGAATAAAATCATATTTTG

Product: acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MTNLNFEHHLGSLTHAALSQATIISRVWGEGPSERYDELASNFRPTFARIKEGALIREQQHILPYEQLQWLKDIGFTRLR
LPKAHGGFDATIPELFALLIELAEADSNLPQALRVHFGFTEDVLVSKDKAFQQRWISRIANGETVGSAWSEGGKESIDQF
ETHLYRDSDGKIRVKGKKYYTTGSLYADWVDVGVTDLKGESGSVVVRREDEGVEIVDDWNGFGQQLTASGTAYFHDVLVD
EAEILPDDDRFKYSAAYYQLVQLAIITGLGRAATYDVSQAVAKRTRNYTHANAQFVKQDPQILQVVGQIRGAAYSAGAIV
EKVAQSLQRAYLAAFQNNEQLEEEQNALAELESAQSQTVITDLILNASTILFDALGASATDKDLGLDRYWRNVRTLASHN
PRVFKNRIVGDFSVNGTLPPYQWRIGEVSKQ

Sequences:

>Translated_431_residues
MTNLNFEHHLGSLTHAALSQATIISRVWGEGPSERYDELASNFRPTFARIKEGALIREQQHILPYEQLQWLKDIGFTRLR
LPKAHGGFDATIPELFALLIELAEADSNLPQALRVHFGFTEDVLVSKDKAFQQRWISRIANGETVGSAWSEGGKESIDQF
ETHLYRDSDGKIRVKGKKYYTTGSLYADWVDVGVTDLKGESGSVVVRREDEGVEIVDDWNGFGQQLTASGTAYFHDVLVD
EAEILPDDDRFKYSAAYYQLVQLAIITGLGRAATYDVSQAVAKRTRNYTHANAQFVKQDPQILQVVGQIRGAAYSAGAIV
EKVAQSLQRAYLAAFQNNEQLEEEQNALAELESAQSQTVITDLILNASTILFDALGASATDKDLGLDRYWRNVRTLASHN
PRVFKNRIVGDFSVNGTLPPYQWRIGEVSKQ
>Mature_430_residues
TNLNFEHHLGSLTHAALSQATIISRVWGEGPSERYDELASNFRPTFARIKEGALIREQQHILPYEQLQWLKDIGFTRLRL
PKAHGGFDATIPELFALLIELAEADSNLPQALRVHFGFTEDVLVSKDKAFQQRWISRIANGETVGSAWSEGGKESIDQFE
THLYRDSDGKIRVKGKKYYTTGSLYADWVDVGVTDLKGESGSVVVRREDEGVEIVDDWNGFGQQLTASGTAYFHDVLVDE
AEILPDDDRFKYSAAYYQLVQLAIITGLGRAATYDVSQAVAKRTRNYTHANAQFVKQDPQILQVVGQIRGAAYSAGAIVE
KVAQSLQRAYLAAFQNNEQLEEEQNALAELESAQSQTVITDLILNASTILFDALGASATDKDLGLDRYWRNVRTLASHNP
RVFKNRIVGDFSVNGTLPPYQWRIGEVSKQ

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 48147; Mature: 48016

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLNFEHHLGSLTHAALSQATIISRVWGEGPSERYDELASNFRPTFARIKEGALIREQQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHH
HILPYEQLQWLKDIGFTRLRLPKAHGGFDATIPELFALLIELAEADSNLPQALRVHFGFT
HCCCHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCC
EDVLVSKDKAFQQRWISRIANGETVGSAWSEGGKESIDQFETHLYRDSDGKIRVKGKKYY
HHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHEECCCCEEEEECCEEE
TTGSLYADWVDVGVTDLKGESGSVVVRREDEGVEIVDDWNGFGQQLTASGTAYFHDVLVD
ECCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
EAEILPDDDRFKYSAAYYQLVQLAIITGLGRAATYDVSQAVAKRTRNYTHANAQFVKQDP
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCH
QILQVVGQIRGAAYSAGAIVEKVAQSLQRAYLAAFQNNEQLEEEQNALAELESAQSQTVI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHH
TDLILNASTILFDALGASATDKDLGLDRYWRNVRTLASHNPRVFKNRIVGDFSVNGTLPP
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCCCCC
YQWRIGEVSKQ
CEEECCCCCCC
>Mature Secondary Structure 
TNLNFEHHLGSLTHAALSQATIISRVWGEGPSERYDELASNFRPTFARIKEGALIREQQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHH
HILPYEQLQWLKDIGFTRLRLPKAHGGFDATIPELFALLIELAEADSNLPQALRVHFGFT
HCCCHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCC
EDVLVSKDKAFQQRWISRIANGETVGSAWSEGGKESIDQFETHLYRDSDGKIRVKGKKYY
HHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHEECCCCEEEEECCEEE
TTGSLYADWVDVGVTDLKGESGSVVVRREDEGVEIVDDWNGFGQQLTASGTAYFHDVLVD
ECCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
EAEILPDDDRFKYSAAYYQLVQLAIITGLGRAATYDVSQAVAKRTRNYTHANAQFVKQDP
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCH
QILQVVGQIRGAAYSAGAIVEKVAQSLQRAYLAAFQNNEQLEEEQNALAELESAQSQTVI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHH
TDLILNASTILFDALGASATDKDLGLDRYWRNVRTLASHNPRVFKNRIVGDFSVNGTLPP
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCCCCC
YQWRIGEVSKQ
CEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]