Click here to switch to the map view.

The map label for this gene is putR [H]

Identifier: 213156952

GI number: 213156952

Start: 1713483

End: 1713938

Strand: Direct

Name: putR [H]

Synonym: AB57_1625

Alternate gene names: 213156952

Gene position: 1713483-1713938 (Clockwise)

Preceding gene: 213156950

Following gene: 213156954

Centisome position: 42.3

GC content: 41.23

Gene sequence:

>456_bases
ATGGATCGCACGGATAAAAAGATTCTTGCTGAATTGCAATTAAATGGCCGATTATCTATCACTGAATTGGCAGAAAAAGT
TGGTTTGAGCATTTCACCTTGTCATAGACGAGTGAAGGCTTTAGAAGAGTCGGGAGCTATCAAAGGCTATCGGGCAGAAC
TCGACCCAAACTTAGTCGGTTTTGAGTTTTCAGCGATTGTTTTTATTACGCTTAAAGAAGGCGATAAACAGGCGGTTGAG
AAGTTTGAAAATGCCGTGATTGAGATTCCGCAAATTATTCAGGCGCAGCGTTTGTTTGGTGAACCTGACTATTTACTCCA
TGTTGTTGCTAAAGATTTACCAGCTTTTCAGCGTTTATATGACGAAAAATTATCGGCTATTCCAAGTGTGCAACGGCTCA
TCTCAACCATTGTGATGAAAGATGTGGTGCCTGAGCGTTTATTTCCGATTGGCTAA

Upstream 100 bases:

>100_bases
CCTATTTATTCGAGCTTGTTGAAAATAATATGCTCATGTATTTAGAATGTGCTTTTAAATGTTTGCTCATATCACATACA
TTTGGGGTAAATTTTTCTAA

Downstream 100 bases:

>100_bases
ATCATCAGATGTAAAAAAAGAAGCTTTAAAGCTTCTTTTTTAATTGGTAAAGGGGGCTAAGCATCGAGTGTTTTACACAA
AGAACAAATTGTACTGTTAT

Product: proline dehydrogenase transcriptional activator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MDRTDKKILAELQLNGRLSITELAEKVGLSISPCHRRVKALEESGAIKGYRAELDPNLVGFEFSAIVFITLKEGDKQAVE
KFENAVIEIPQIIQAQRLFGEPDYLLHVVAKDLPAFQRLYDEKLSAIPSVQRLISTIVMKDVVPERLFPIG

Sequences:

>Translated_151_residues
MDRTDKKILAELQLNGRLSITELAEKVGLSISPCHRRVKALEESGAIKGYRAELDPNLVGFEFSAIVFITLKEGDKQAVE
KFENAVIEIPQIIQAQRLFGEPDYLLHVVAKDLPAFQRLYDEKLSAIPSVQRLISTIVMKDVVPERLFPIG
>Mature_151_residues
MDRTDKKILAELQLNGRLSITELAEKVGLSISPCHRRVKALEESGAIKGYRAELDPNLVGFEFSAIVFITLKEGDKQAVE
KFENAVIEIPQIIQAQRLFGEPDYLLHVVAKDLPAFQRLYDEKLSAIPSVQRLISTIVMKDVVPERLFPIG

Specific function: Transcriptional activator of the putA gene in response to proline [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=142, Percent_Identity=38.7323943661972, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=32, Blast_Score=97, Evalue=3e-22,
Organism=Escherichia coli, GI1790182, Length=151, Percent_Identity=25.1655629139073, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 16959; Mature: 16959

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRTDKKILAELQLNGRLSITELAEKVGLSISPCHRRVKALEESGAIKGYRAELDPNLVG
CCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEECCCCCCEEC
FEFSAIVFITLKEGDKQAVEKFENAVIEIPQIIQAQRLFGEPDYLLHVVAKDLPAFQRLY
EEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
DEKLSAIPSVQRLISTIVMKDVVPERLFPIG
HHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDRTDKKILAELQLNGRLSITELAEKVGLSISPCHRRVKALEESGAIKGYRAELDPNLVG
CCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEECCCCCCEEC
FEFSAIVFITLKEGDKQAVEKFENAVIEIPQIIQAQRLFGEPDYLLHVVAKDLPAFQRLY
EEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
DEKLSAIPSVQRLISTIVMKDVVPERLFPIG
HHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592417 [H]