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The map label for this gene is rutD [H]

Identifier: 213156883

GI number: 213156883

Start: 1636350

End: 1637141

Strand: Direct

Name: rutD [H]

Synonym: AB57_1554

Alternate gene names: 213156883

Gene position: 1636350-1637141 (Clockwise)

Preceding gene: 213156882

Following gene: 213156884

Centisome position: 40.4

GC content: 43.43

Gene sequence:

>792_bases
ATGATGTCAAAAACCCTGCAGCTGTCAAATAACCGTATTGCTCACTATTTTGAGCAAGGCGAAGGAGAGCCTCTGGTTCT
GATCCATGGAGTGGGAATGCAAGCTGCGGCATGGTATCCACAAATTGAATATTTTTCTAAACATTATCATGTGATTTCAG
TAGATATGCCGGGACATGGTCAAAGTACCAAATTACCAGCAGAAGCAAAATTACAAGATTTTGTTGAATGGACCATCGAA
TTTATTACAGCCTTAAATTTAGGCCCGGTAAATCTAGCAGGGCATTCAATGGGCTCGCTAATTACCACAGGCGTCAGTGT
TACCCGTCCTGATTTAGTTAAACGGATGGCTGTACTCAATGGTGTGTATAAACGGACACCACAGGCACGTCATGCAGTCA
TCCAAAGAGCTGAAGAGTTAAAAACAGGCCGTATTGATGTTGAAACTCCGCTACAACGCTGGTTTGGTGAAAGTGAAGTC
GAGCGTATAGCTGCTGCCAAAGTAAAAACTTGGCTCGAAAATGTCGACTTGTCTGGTTATACCACTGCGTATTCTGCGTT
TGCACAAGGCGATGAAACCTATGCAGATGACTGGTCAAAGATCACTTGTCCTGCTTTGGTGTTAACCGGAACGGATGATC
CGAATTCAACTGCAGAAATGGCAATACAAATGGCAAAACAGGCAAAGCATGGCACTGCAATTGTCATTGAAAATGAACGT
CACATGGTGAACTTAACTGCACCTGACAAAGTGAATAATGCAATGCAAGCGTGGTTGGAAACCAGCGTTTAA

Upstream 100 bases:

>100_bases
CCTGCTGCCGACGAACTGGTTGTTGTGATTGGTGCAGCAACAGGTGGTCGACCACATCATCGTATTGGTGATCGTTATAA
AGATTTGGAAGAGTTAGGTC

Downstream 100 bases:

>100_bases
TTTGCCACACATTGCTGAAGGAATATAACAATGAGTGAAATGGATACTATTAATAAAATGCGTGAACTACGTGATGCTTT
CGGGTCATTTATGACGGGCG

Product: hydrolase

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MMSKTLQLSNNRIAHYFEQGEGEPLVLIHGVGMQAAAWYPQIEYFSKHYHVISVDMPGHGQSTKLPAEAKLQDFVEWTIE
FITALNLGPVNLAGHSMGSLITTGVSVTRPDLVKRMAVLNGVYKRTPQARHAVIQRAEELKTGRIDVETPLQRWFGESEV
ERIAAAKVKTWLENVDLSGYTTAYSAFAQGDETYADDWSKITCPALVLTGTDDPNSTAEMAIQMAKQAKHGTAIVIENER
HMVNLTAPDKVNNAMQAWLETSV

Sequences:

>Translated_263_residues
MMSKTLQLSNNRIAHYFEQGEGEPLVLIHGVGMQAAAWYPQIEYFSKHYHVISVDMPGHGQSTKLPAEAKLQDFVEWTIE
FITALNLGPVNLAGHSMGSLITTGVSVTRPDLVKRMAVLNGVYKRTPQARHAVIQRAEELKTGRIDVETPLQRWFGESEV
ERIAAAKVKTWLENVDLSGYTTAYSAFAQGDETYADDWSKITCPALVLTGTDDPNSTAEMAIQMAKQAKHGTAIVIENER
HMVNLTAPDKVNNAMQAWLETSV
>Mature_263_residues
MMSKTLQLSNNRIAHYFEQGEGEPLVLIHGVGMQAAAWYPQIEYFSKHYHVISVDMPGHGQSTKLPAEAKLQDFVEWTIE
FITALNLGPVNLAGHSMGSLITTGVSVTRPDLVKRMAVLNGVYKRTPQARHAVIQRAEELKTGRIDVETPLQRWFGESEV
ERIAAAKVKTWLENVDLSGYTTAYSAFAQGDETYADDWSKITCPALVLTGTDDPNSTAEMAIQMAKQAKHGTAIVIENER
HMVNLTAPDKVNNAMQAWLETSV

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 29141; Mature: 29141

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSKTLQLSNNRIAHYFEQGEGEPLVLIHGVGMQAAAWYPQIEYFSKHYHVISVDMPGHG
CCCCEEECCCCCEEHHHHCCCCCEEEEEECCCCCHHHCCCHHHHHCCCEEEEEEECCCCC
QSTKLPAEAKLQDFVEWTIEFITALNLGPVNLAGHSMGSLITTGVSVTRPDLVKRMAVLN
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHH
GVYKRTPQARHAVIQRAEELKTGRIDVETPLQRWFGESEVERIAAAKVKTWLENVDLSGY
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
TTAYSAFAQGDETYADDWSKITCPALVLTGTDDPNSTAEMAIQMAKQAKHGTAIVIENER
HHHHHHHHCCCCCHHCCCCCEECCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCC
HMVNLTAPDKVNNAMQAWLETSV
EEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMSKTLQLSNNRIAHYFEQGEGEPLVLIHGVGMQAAAWYPQIEYFSKHYHVISVDMPGHG
CCCCEEECCCCCEEHHHHCCCCCEEEEEECCCCCHHHCCCHHHHHCCCEEEEEEECCCCC
QSTKLPAEAKLQDFVEWTIEFITALNLGPVNLAGHSMGSLITTGVSVTRPDLVKRMAVLN
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHH
GVYKRTPQARHAVIQRAEELKTGRIDVETPLQRWFGESEVERIAAAKVKTWLENVDLSGY
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
TTAYSAFAQGDETYADDWSKITCPALVLTGTDDPNSTAEMAIQMAKQAKHGTAIVIENER
HHHHHHHHCCCCCHHCCCCCEECCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCC
HMVNLTAPDKVNNAMQAWLETSV
EEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]