Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212636466

GI number:

Start: 3934551

End: 3938078

Strand: Reverse

Name: Not Available

Synonym: swp_3720

Alternate gene names: NA

Gene position: NA

Preceding gene: 212636467

Following gene: 212636465

Centisome position: NA

GC content: NA

Gene sequence:

>3528_bases
ATGAAATTTGGACAGTTTTTAATCATAGTCGCAACTGTACTTATCATGATATCAGGTGCAAGTTATTCTGATGATACTGA
GCTGTATGTATTTGAATCTTCTGCACGTTCAGGCTCTAGGCCTCAAGTACTGATTATTTTTGATAATTCTGGAAGTATGC
GAACTCAGGAGTACAGTGAAAACTTTTACTCTCGTGGTGAAACCGTCAATGACGGTACTAAGTTATATTATGCTAAAGGC
GGCGGCAGCGTCCCTGAACCAACAAGCAATAATTACTTTTATAATTCTGTTAATGGCTGTAAGTCATCGAAGGAGTACTT
GGCTGATTACGGTGTGTTTACAGGTTTTGTACGAGAATATGGTTTTGTTGGTGAAAATGGAACTTGGCTAGAGCTACCTG
ATACTTTAGGTAGTGCAGTCTCGCAAGTTGATTGCTTTGAAGATTTTGAAACGAATGACGACATAAAATTTGAAAATGCT
ACTGGTGTTGATAATGGGCTACCTGTTGATAGTTTAGGCTCTAAAGCTGCACCAATCCCATATACTCATATTTCAAGTAG
CGCTTCGTCCTCAGATATCGAAAATGCTATTGATGCTGCATTCTTAACCAAGTTTGGTACCGGTAAATCAGTGACGTTAT
ACACCGAGCGGTATGTTAATTGGTATCATGGTTATAAATCGAGTAGCTGGCAAACACGGATGAACATTGCTAAGCGAGTC
ATGGAAGATACGGTAGTCACCACGCCAAGTGTCGATTTCGGACTTGCTATATTTAACTATAATACGAGTAAAAGAACAGA
TGGTGGGCGCATTGTTTCTGGTATTAATCGTTTAAGCACTGGCGATAAAATTTCCCTAGTTGACAAGATTAATGATCTAA
ATGCTGAAACTAATACTCCCCTTTGTGAAACGTTGTACGAAGCATACCGTTACTTCTCAGGTAGCGCAGTTCATTTTGCC
AAGGAAGCTGGCAGCATGACGCCAACGAGAGATAAATCAATAGAAAGTAACGGTAATTATGTATCACCATTTAAAAGCTC
ACAGTGTTCGAATCGTTCCTATGTTGTCTACATCACTGATGGCTCCCCGACTCAGGATTCAGCGGCTAATACCAAAGTAT
CGAAAATGAGTGGTTACAAATCTTCTGAGAGAGTGGATGGTAGTTATCTACCTGCCTTAGCGAGCATTATGCATCGGCAA
GATGTTAATCCTTCACTTGCTGGGGAACAATTCGTTACAACATACACTATCGGTTTTAGTGACGGTGCAGCCGATGCAGA
ACCTATTCTTAAAAAGACGGCTGAGTTAAGCGGTGGTACATATTTTCCAGCTAAGAATGCAACACAATTACAATCAGCTC
TGCAACAAGTTTTTTCACAGATTCTAGAGGTTAATGCAAGTTTTACCTCTCCGTCTATAGCAAGCAACAACTTTGATAGA
ACCCAAACTTTTGACTCCGTGTATTATGCAATGTTTTTGCCTAATAAAGGTCCACGATGGATGGGCAATATTAAGAAGTT
TAAAGTGACTGGTAGCGGCGATATCGTTGATAAAAATGGCAATGCAGCTATTGGTTCCGATGGTAACTTAAGTAACTCAG
CATGTTCATATTGGACTCCCAATAGCGTTTGCAGTGCAAGCAGCGGTGGTGGTGATGGAAACGATGTTAGAGTTGGTGGG
GTTGCGCACGAGTTAAGAAGTGCGACTAGTCGGACTCTATATGGTAATTTTGGCTCTAATGGTGGTCTGGCTGCTTTTAG
TAAGAGCAATGCTTCGTCTGTAGCTGGTGGGGACGCTGCGCTAGCAAGTTATATGGGAGTGACTCAAAGTAGCTTAAACA
GTTATTTTGATTGGGCTAAAGGTAAGGATGTCGATGATGATGATAACGACTCTTCAAAAACTGATGCAAGACAAGACATT
TTTGGAGATCCCTTACATTCTAAACCATTAGCAATGAACTTTGGTACTGCGGGCTCACCAGATATTAGAGTTATCGTTGG
AACTAACCATGGATATTTGCACATGTTTAAAGATGAAGATACCTCTGTATCTGAATCATGGGCATTTATGCCCTATGAAT
TGCTGCCAAATATTCGTGAATTAAAAGCTAATGTCCCAACAGGAGTTCATTCAATATATGGATTAGATAGTCCCCCAGTT
TCCTATGTTAAAGCTGCTGCTGACGGCTCAGTTGAAAAAGCATGGCTTTTTGTCGGTATGCGACGAGGAGGGAAATCCTA
TTACGCTCTAGATATTAGCAACCCTGATAAACCCACGTTTATGTGGAAAATAAACTCTAATAGCACTGGTATGTCCGAGC
TCGGGCAGACTTGGGCGGAGCCTGTCGTAACTTATATACCTGGTTGGCCAACTGGAAATACCGAATTTTCAAAAGCTAAA
CCAGTACTTATCTTTGGCGCGGGATATTCGCCAGCAACTAAAGACAGCGCTGCCGTTGGCAGCCCAGATACGCTGGGGCG
TGGAGTCTTTATCGTTGATGCAGAAACGGGAAAGTTAATTCACTCATTTGCGGCAAACGGTGGAGCGTCGGTGACTCAGC
TCCCTGGAATCACTGATAGTATTCCAAATTCGGTGGCCGTACTAGATAGTAATGGCGATAAGCTAACAGACAGGTTCTAC
GCCACAGATACAGGGGCAAATGTTTGGCGAATCGATCTTCCTAGCGCAAACCCTAAAGATTCAATTAAGCCTTGGACAGC
CTTTAAATTTGCAGATCTAGGCGGTGCTTCTACAACTTCGGATAGACGTTTTTTCGCTGAGGCAGCTGTCGCTCAAACGA
TGTTCACTAATATTTCAGAAGTAGATGTTACCGTAGATGGTACAACCACGACTACGAAGACCTATCAAAATGTGCCCTAT
GATGCAGTTGTGGTTGGTTCTGGGCATAGACCCCACCCATTAGATCTACTGCGAAGTGACAAGTTTTTCACTTTACAAGA
TAGGAATGTTGTTTCTCGCCCATTTAACGGTGATGAAGGTAATGAAATACCTGCAGCCATAACTATGGCTAACTTATACA
ACGTGTCCTCAGCAGCTCCAGAATCAGAATTAGAGAATATTGAATTTGGCACTAAACGTGGTTGGTATTATCAATTCTCT
GGTAAGGGAGAGAAAAGCCTCTCTGCAGCTACAATTATTCAAGGACGAGTCTTTTTTACTTCCTATGTGCCTGGTGATAA
CTCTGACGCTAATCAGTGTTTAGTTTCAGGAGTTGGTAGGTTGTATGGTTTTGATCTACATCGCGGCATACGCTCATACA
CTCATGAATATTTAGAGATGGGTGAGCGAGTTCCCGATACCCCTCAGCTTGTTGTTCCACCAAATGGTGAGGATGATAGT
TACATGTATCTAATCGGGATAGGTGCAGCAGGGGATAAAATGGAACATAAAGAGTGCCCTGAAGGTAGTTTAAATTGCCC
ACCACCTCCGCCATGTGAGGCTGGAGATAGTAAATGCGTTGGCGGTGGACTAGGGGTTAACCGAATCTATTATCATGTTG
ATGACTAG

Upstream 100 bases:

>100_bases
AAATATCCAGTCAAGCAACGTTTGGCCGCAATAACATGGGACAGCTAACCGTTGTCTCAGGAATAGAGCAAGAAATTTTA
GGGGCAACAGGGAACTGATT

Downstream 100 bases:

>100_bases
GTGGAAGTATGAGAAAAAATATGGGCTTCACCTTAATTGAAGTGATGATCGTGGTTGCAGTGATAGGTATTTTATCGACC
ATTGCTTACCCATCCTATAT

Product: type IV pilin biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1175_residues
MKFGQFLIIVATVLIMISGASYSDDTELYVFESSARSGSRPQVLIIFDNSGSMRTQEYSENFYSRGETVNDGTKLYYAKG
GGSVPEPTSNNYFYNSVNGCKSSKEYLADYGVFTGFVREYGFVGENGTWLELPDTLGSAVSQVDCFEDFETNDDIKFENA
TGVDNGLPVDSLGSKAAPIPYTHISSSASSSDIENAIDAAFLTKFGTGKSVTLYTERYVNWYHGYKSSSWQTRMNIAKRV
MEDTVVTTPSVDFGLAIFNYNTSKRTDGGRIVSGINRLSTGDKISLVDKINDLNAETNTPLCETLYEAYRYFSGSAVHFA
KEAGSMTPTRDKSIESNGNYVSPFKSSQCSNRSYVVYITDGSPTQDSAANTKVSKMSGYKSSERVDGSYLPALASIMHRQ
DVNPSLAGEQFVTTYTIGFSDGAADAEPILKKTAELSGGTYFPAKNATQLQSALQQVFSQILEVNASFTSPSIASNNFDR
TQTFDSVYYAMFLPNKGPRWMGNIKKFKVTGSGDIVDKNGNAAIGSDGNLSNSACSYWTPNSVCSASSGGGDGNDVRVGG
VAHELRSATSRTLYGNFGSNGGLAAFSKSNASSVAGGDAALASYMGVTQSSLNSYFDWAKGKDVDDDDNDSSKTDARQDI
FGDPLHSKPLAMNFGTAGSPDIRVIVGTNHGYLHMFKDEDTSVSESWAFMPYELLPNIRELKANVPTGVHSIYGLDSPPV
SYVKAAADGSVEKAWLFVGMRRGGKSYYALDISNPDKPTFMWKINSNSTGMSELGQTWAEPVVTYIPGWPTGNTEFSKAK
PVLIFGAGYSPATKDSAAVGSPDTLGRGVFIVDAETGKLIHSFAANGGASVTQLPGITDSIPNSVAVLDSNGDKLTDRFY
ATDTGANVWRIDLPSANPKDSIKPWTAFKFADLGGASTTSDRRFFAEAAVAQTMFTNISEVDVTVDGTTTTTKTYQNVPY
DAVVVGSGHRPHPLDLLRSDKFFTLQDRNVVSRPFNGDEGNEIPAAITMANLYNVSSAAPESELENIEFGTKRGWYYQFS
GKGEKSLSAATIIQGRVFFTSYVPGDNSDANQCLVSGVGRLYGFDLHRGIRSYTHEYLEMGERVPDTPQLVVPPNGEDDS
YMYLIGIGAAGDKMEHKECPEGSLNCPPPPPCEAGDSKCVGGGLGVNRIYYHVDD

Sequences:
NA

Specific function: NA

COG id: COG3419

COG function: function code NU; Tfp pilus assembly protein, tip-associated adhesin PilY1

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA