| Definition | Shewanella piezotolerans WP3 chromosome, complete genome. |
|---|---|
| Accession | NC_011566 |
| Length | 5,396,476 |
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The map label for this gene is dnaE
Identifier: 212636262
GI number:
Start: 3707774
End: 3711244
Strand: Reverse
Name: dnaE
Synonym: swp_3506
Alternate gene names: NA
Gene position: NA
Preceding gene: 212636263
Following gene: 212636261
Centisome position: NA
GC content: NA
Gene sequence:
>3471_bases ATGTCTGATCCTTTATTTGTGCATTTGCGCGTCCATAGTGACTTTTCAATGTCTGATGGGCTGTCCAAGGTTAAACCTAT TCTTGCTAAAGTGAGCGAGCTTGGGATGCCTGCAGTGGCGTTGACGGATCAGACTAATATGTGTGGACTGGTAAAATTTT ACGGCGGCTGTCATGGTGCCGGAATAAAACCCATCATCGGCACTGAGTTTTGGGTACAAGTGCCGGGCGTCGATGAGCTT TGTTCTATTACTGCAATTGCAATGAATAATGAAGGTTATTCGAGCTTAACGCTACTGATCAGTGATGCTTATCTTCGCGG CCATATTGATGATAGAGCAGTGATTGATCATGAGTGGTTAGCTAAGTATAACGACGGTTTGATTTTACTCTCTGGTGGAC GCCATGGTGATGTTGGTCGAGCGTTACTAAAAGACAACAAGGCTCAAGTTGATTCCCTAATTGAATTTTATCAAACACAC TTTCCTGACCGTTATTACCTAGAATTGTTACGCACCGGTCGTCCAGATGAAGAGCGTTACTTGCATATGGCTGTGGAGTT AGCACAGGCAAAGGATTTACCTGTCGTTGCTACCAACCAAGTGGTGTTTAATAAACCTGAACAGTTTGAAGCCCATGAAA TTCGGGTGGCGATCTCCGATGGTTTTACGCTAGCCGATCCTCGCAGACCTAAAAAATACAGTGATCAGCAGTATTTTAAG AGTAGTGAAGAGATGTGCGAATTGTTCGAGGATATTCCAGAAGCAATTCAAAACACCGTTGAGATCGCCAAGCGTTGTAA CGTTACTGTGCGTTTGAATGAATATTTCCTGCCTAACTTTCCTACTGGCGATTTGACCATTGAAGACTTTTTGGTCGATG TTTCTGAAAAAGGACTTGAGGAACGTTTAGAGTTTTTGTTTCCTGATCCAGAAGTAAGAGCTGAAAAACGACCAGAATAC GATGAACGTTTAGATATTGAACTTAAAGTTATTAACGAGATGGGTTTCCCTGGCTACTTCCTGATTGTCATGGAGTTTAT TCAATGGGGTAAAGATAATGATATCCCTATTGGCCCTGGTCGAGGTTCGGGAGCGGGGTCGCTAGTGGCCTATGCTCTCA AAATTACCGATCTTGATCCATTAGAGTATGATCTACTATTCGAACGATTTCTTAACCCTGAGCGTGTATCTATGCCGGAT TTCGACGTCGATTTCTGTATGGATCGTCGAGATGAGGTTATTGACCACGTGGCCGATCTTTACGGCCGTGATGCGGTATC GCAGATTATTACCTTCGGTACCATGGCGGCTAAAGCGGTAATACGAGATGTGGGTCGTGTGCAAGGACACCCTTACGGTT TTGTCGATAGGATCTCTAAGATGATCCCTGCTGAGCCTGGCATGACGCTGGCTAAAGCATTTGAAGTCGAACCCGCTTTG CAGGAGTCCTACGATGGCAGCGAGGAGGTTAAAGACCTTATCGATATGTGTCGGATTTTGGAAGGTGTTACCCGTAACGC TGGTAAGCACGCCGGTGGTGTTGTTATCGCGCCGACCAAAATTACTGATTTCTCCCCTATTTACTGTGACTCCGAAGGGC TTAACCCTGTTACTCAGTTCGATAAAAACGATGTAGAAACCGCGGGTCTGGTTAAGTTCGATTTCTTAGGGTTAAGAACG CTCACCATTATTGATTGGGCGTTGCAGATGGTGAACGCCGTTAAAGACAAGAATGGCGAAGATCGCGTGCGAATTGAGTC TATTTCGCTGACAGATCCTAAGTGTTTTAAGTTATTACAACGCTACGAAACGACAGCGGTATTCCAGCTTGAATCCCGTG GTATGAAGGATTTGATTAAGCGTCTTCAGCCTGACTGCTTTGAAGATATGATTGCATTGGTAGCATTGTTTAGACCCGGC CCTTTGCAGTCAGGCATGGTAGATAACTTCATTGAGCGTAAGCATGGTCGCGAAGAAGTCTCTTACCCTGATGCTGAGTA CCAGCACGAATCACTTAAAGAATTACTGTCGCCAACTTACGGTATTATTTTATATCAAGAGCAAGTGATGCAAATTGCTC AGGTATTGGCGGGTTATACTTTGGGCGGCGCCGATATGTTGCGTCGAGCGATGGGTAAGAAAAAGCCTGAGGAGATGGCT AAGCAGCGCGGTACTTTCGAAGAGGGATCGATTAAAAACGGCGTTGATGGTCCATTGTCGATGAAGATCTTCGATCTGGT AGAAAAGTTTGCGGGTTACGGTTTTAACAAATCACACTCTGCAGCCTACGCGTTGGTGTCATACCAGACTCTTTGGTTAA AGACTCATTATCCGTCGCAGTTTATGGCAGCGGTTATGTCTGCGGATATGGATAATACCGACAAGATCGTGACTTTGGTT GATGAGTGCGAACGTATGGGATTACCGCTGATCCCACCTGATGTGAATAAGGGCTTGTTTAGATTCACTGTCGATGACGA TCTTAATATTGTTTACGGTATTGGTGCGGTTAAAGGGGTGGGTGAAGGTCCTGTTGACTCGATACTAGAGGCCAGAAAAG ATGGTCCATTTACTGACTTATTTGATTTTTGTGCCCGAATTGATCTTAAAAAACTTAATCGTCGCGTGATTGAAAAGCTC ATTTGCGCGGGAGCATTGGACAATCTTGGCCCACACCGAGCCGCGTTGGTAGCCACGCTACCAGAAGCTATTCGCGCAGC AGACCAACATGCTAAAGCAGAGGCAATTGGTCAGCATGATATGTTTGGTTTATTAAATAATGAGCCAGAAGATGACAAAC AGCAGTTCGTTGATTGTACACCGTGGCCAGATAAAGTTTGGTTAGAGGGAGAGCGGGACACACTCGGTTTGTATTTAACT GGCCACCCGATTAATCAGTATCTCAAAGAACTTAAGCATTACACATCTGGGCGCCTGAAAGATGTGCACCCAACTGAACG CGGAAAAACCGTGAAAGCGGCAGGGCTTGTGGTCGCCACTCGGGTTATGATGACCAAGCGTGGCGCTAAAATGGGCTTAG TGACCTTGGATGATAAAAGTGCACGCTTAGAGGTAATGTTATTTACCGAAGCGTTCGAGAAATTTAACCACTTGCTTGAA AAAGACCGTATTTTGATTATTGAAGGCGAAGTCAGTTTCGATGACTTCTCCGGCGGTAACCGCATGACTGCACGTAACAT TATTGATATGGGCGAAGCGCGCAGCCACTTTGCAAATGCGGTTGAAGTTGACTTGCAGTCAACAGAGGTTGATGGAGACT GGTTAAACCGTTTTCAGGCAGCAGTTGAGCCATGGAAAAATGGCGCTGTACCAGTGTTAATCAATTACGCCCAGCCAGAA ACTAGGGCGCAGTTTGCACTAGGTGATGAATGGCGGGTGAACCCAACCGATGATTTGATGTTGGCGCTTGAGTCATTAAC AGGCTCAAACAAAGTTCGGATTGTCTTTTAA
Upstream 100 bases:
>100_bases TGTCTAGATTAGCGGTTTCGCTTGTTTGCTGCTAGTCCATGTTTTACTCTGTAATATTGACTATTTGTCTTCATCTACCT AAAAGAAAGATACTCCATAT
Downstream 100 bases:
>100_bases GTTATGGATATTGCAGAGCTGATCCAACACTGTATCGACGAATTACCATCGATTGATTTGAGCCAAAAGCCCCGTAAAAT CGTGTTGGCTTATAGTGGCG
Product: DNA polymerase III subunit alpha
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1156_residues MSDPLFVHLRVHSDFSMSDGLSKVKPILAKVSELGMPAVALTDQTNMCGLVKFYGGCHGAGIKPIIGTEFWVQVPGVDEL CSITAIAMNNEGYSSLTLLISDAYLRGHIDDRAVIDHEWLAKYNDGLILLSGGRHGDVGRALLKDNKAQVDSLIEFYQTH FPDRYYLELLRTGRPDEERYLHMAVELAQAKDLPVVATNQVVFNKPEQFEAHEIRVAISDGFTLADPRRPKKYSDQQYFK SSEEMCELFEDIPEAIQNTVEIAKRCNVTVRLNEYFLPNFPTGDLTIEDFLVDVSEKGLEERLEFLFPDPEVRAEKRPEY DERLDIELKVINEMGFPGYFLIVMEFIQWGKDNDIPIGPGRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPD FDVDFCMDRRDEVIDHVADLYGRDAVSQIITFGTMAAKAVIRDVGRVQGHPYGFVDRISKMIPAEPGMTLAKAFEVEPAL QESYDGSEEVKDLIDMCRILEGVTRNAGKHAGGVVIAPTKITDFSPIYCDSEGLNPVTQFDKNDVETAGLVKFDFLGLRT LTIIDWALQMVNAVKDKNGEDRVRIESISLTDPKCFKLLQRYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPG PLQSGMVDNFIERKHGREEVSYPDAEYQHESLKELLSPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEMA KQRGTFEEGSIKNGVDGPLSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPSQFMAAVMSADMDNTDKIVTLV DECERMGLPLIPPDVNKGLFRFTVDDDLNIVYGIGAVKGVGEGPVDSILEARKDGPFTDLFDFCARIDLKKLNRRVIEKL ICAGALDNLGPHRAALVATLPEAIRAADQHAKAEAIGQHDMFGLLNNEPEDDKQQFVDCTPWPDKVWLEGERDTLGLYLT GHPINQYLKELKHYTSGRLKDVHPTERGKTVKAAGLVVATRVMMTKRGAKMGLVTLDDKSARLEVMLFTEAFEKFNHLLE KDRILIIEGEVSFDDFSGGNRMTARNIIDMGEARSHFANAVEVDLQSTEVDGDWLNRFQAAVEPWKNGAVPVLINYAQPE TRAQFALGDEWRVNPTDDLMLALESLTGSNKVRIVF
Sequences:
NA
Specific function: NA
COG id: COG0587
COG function: function code L; DNA polymerase III, alpha subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA