| Definition | Shewanella piezotolerans WP3 chromosome, complete genome. |
|---|---|
| Accession | NC_011566 |
| Length | 5,396,476 |
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Identifier: 212636172
GI number:
Start: 3594775
End: 3599109
Strand: Reverse
Name: Not Available
Synonym: swp_3411
Alternate gene names: NA
Gene position: NA
Preceding gene: 212636173
Following gene: 212636171
Centisome position: NA
GC content: NA
Gene sequence:
>4335_bases ATGTCGAGGATCTCTAATAATATCTCTCTTTTAGCGCTGACTATCAGTGCGTTGAGTTTAGCGGGTTGTGGCGGAGATTC GTCAGAACCTGGTAGCGTGTTACTGACTTGTAATGTACCTATGGTGCCGGATGCAGCTGGTACCAGTTGTGTCGCGCCCG AACCAATTAGTTGCCCAGCTCCAACGGTTCCTGATGAAAACAATGAGCAGTGTATTGTTGGCGCAGATCCCACTTTACCC GCGCCTGTTTTTACCCCCGCAGCCAATCAAGCCGTGGTGTATTACAACAATGTGCAAGACGCTGACAACAGCCCAAGTGA CCCAACTTATGATGGTTACCGGTTGCACACTTGGAACAACGATACGTGTGACGCTTATGCTGCACCGTTTGATAGCTCCG ATTGGGCTAATGGTCATCAGATTGATGGTATCGATCCCAATTACGGTGCCTACTGGATTGTGAATTTGAAAGAGGGTTAT AGCGATTGCGGTAACTTCATCATTCATATTGGCACAGAAGGCTCGGGCAAGGCGCTTGGTGATGGCGACCTAAGCATGCC GTTGATGCAAGATGATGAAGCATTTGTGCGAATGAACTTTACCCTGCACGGGGAGCCTTCGGTTTTTGAATATCCAATAT TAAGCTTAGGTGTACAACCGTTATCGATAACAGGAATGAGCGCACATTGGCTTGATGCTGACACACTCATTTGGGATCAA GATGATGCCGATATTAGTAGCTTTAAACTGCACTATGCTCAAAAAGCAGATATCAGCGTTGAAGCGGAACCAGACCGGAT CCTCAATAGTGAGACTGTGGCCTTAACTGCAATGGAACTTAGCGACGCGCAAAAAGCACTGATCCCGCATATGGCACACT GGAAAGCCTATAGCACCAATTTAACAGCTGATGAAGCCAAAGCGATTGTCAAAGCGCAGTTGGTTGTCGCTGCCCATAAT GGTGATGACGTGCCTGTGGCTGCGACCTATGTGCAGGCAGCGAAGGTGCTAGATGCACTTTACACGGCAGGAGAAAGCGA TGCCGATGAAGCTAAACTAGGGCTCGACTATAGCGATGGCAGTGTAACCACTTCGGTATGGGCGCCAACGGCTCAAGCGT TAAAACTCAATATCTACAATGCAGATAAGAGCTTAAATCGTAGCGAAGAGATGAGTTTTGATGCGATGACGGGGATCTGG TCATTCAAAGGCGATATGAGTCTAGATAGACTATTTTACCGCTTTGAAGTAACGGTGTATCACCCTCTAACTAAACAACT AGAGACCGTTGAAGCAACTGACCCATATTCGCTTAATGTGTCAACGAATGGACGTTACAGCCAATTTGTTAATCTAAGCG ATGATGACTTAAAGCCTGAAGGTTGGGACGATCATAGCGTAGCGACTATTAACAACCCTGAAGATGCGGTGATCTACGAA GGCCATGTACGTGACTTTAGTATTCGTGATGAAAGTACCTCTAAAGCTAACCGGGGTAAGTATTTAGCTTTTACTGAAGA GGGGACAGCGCCGGTTGAGCACCTTAAAAAGCTGGTGGCGAATGGTTTAACTCACTTCCACATGCTACCTGTAACTGACA TTGCCAGTATTAACGAAGACAGTGCAGAGCGCATAGAGTTAACTGATACCTTGGGGATGTTGTGTGAAAAAATTGATAAT GCAGCGGATGCCTGCAGCACTCAAGATATGGCTGCGACCATTGAGACTGTATTAGCAGACAGCCTACCAGGTTCAGCTGA CGCACAGGCGATTGTTGAAGCTATGCGTGGCCTAGATGGCTTTAACTGGGGTTACGATCCACATCACTTTATCGCACCAG AAGGAAGTTACGCCAGCTCTAGCGAAGGCACTGCCCGAGTATTAGAGCTCAGAGCGATGAACAAAGCGCTGCATGACATG GGGCTAAGAGTGGTGCTTGATGTGGTTTATAACCATACCAGCTCATCGGGTCTTTGGGACAACTCTGTGCTCGACAAGCT CGTGCCGGGTTATTACCACCGTTATAACGAAGAGTCTGGTGTTATTGAACGTTCAACTTGCTGTGAAAACACCGCGACCG AACACCGTATGATGGATAAATTTGTTAGTGACTCTATGGTGATTTTAGCTAAAGAGTACGGCTTTGACAGTTTTAGATTT GACGTGATGGGGCACATGCCTAAGCAGAGTATTCTCGATGCTCGCACAGCTGTGCAAGCGGTCGATGCTGATAACTACTT CTATGGTGAGGGGTGGAACTTCGGTGAAGTCGCTGATAACCGTTTGTTTGAGCAAGCCACACAAGCCAATATGGCGGGCA GTGAAGTGGGCACCTTTAACGACCGCATTCGTGAGAGTGTTCGCGGCGGTAACCTGTTTAAAGTTGAAGCATCAGATGAT GCGCTGCGTGATCAAGATACCTTACGTCTGTCGATGGCCGGTAATCTCAAGAACTATATCCTCAAGGATTTTAACGGTAA TTCGGCTAAAGGCAGCAGCTTTAGCTGGAATAGCCAACCAACGGCTTACACTCTAGATCCTGCCGACAGTATTAACTATG TCTCTAAACATGATAACGAAACACTGTGGGATAACCTGCAATATAAAAATCCTATTGGGATGAGCTTAGACGAGCGTGTG CGGGTGCAAAATATCGCCGCGACATTGCCGTTACTCAGTCAAGGGATCCCATTCCTACAAATGGGTGGAGACCTACTAAG ATCGAAATCGATGGACAGAAACAGTTATGATTCAGGAGACTGGTTTAACTGGGTTGATTTCACTAAAAATAGCCATAACT GGAACGTTGGTTTACCTCGGAAACAGGATAATGAAGCTAAGTGGCAGGAGATAGCTGGGATTTCGGCCAATCCAAATGCG GCAGCATCAATGTCTGAAATTGAGATGGCTTCTAATGTCTTTAACGAGTTCCTAAGCATTCGCAGTCAGAGCCCGTTATT TAGACTGACAACAGAAGCTGAGATCATAGAGCGTGTTGGTTTTCATAACGTCGGTAAGCGTCAAACTCAAGGCGTGATTG TGATGAGTGTTGATGATGGCGCAGACTTAGCCGATTTAGACCCCGCCGTCGATGCGCTGGTTGTGATGGTAAACGCAAGT GCTAATGAAGTCAGTCATACTATACCTACTGCGGCGGGGTTTGAGCTCCACCCAACATTAACGTCGTCGGTTGACTCTAC AGTGACTGGGGCAAGTTTTAGCGCCGGAGAGGGCGAAGGTAGCTTTACTGTCCCCGCTTATACCAGTGCCGTTTTTGTTA AGTTGCAGGGAGATGCTCAAGGTTCGGGTTTAGCAGCCAATGCAACCGTTGGCGCACCAGATGTTGTACCTTTTGGTAGC ACCGAAGTCTTTGTTCGTGGTGGTATGAACGATTGGGGTGAAACTGATAAATTAACTTATGTTGGCGGCGGTGAATATCG AATTGCGATAACTCTTGCTGCAGGCGATTATGAGTTTAAAGTTGCCTCAGCTGATTGGAGCAGTGTTGATTTTGGTGGAC TCTCAGCAGAGGTAGCTCAAGTTGAAGAGGGGATCGATGAGCCATTAACTCTCGCTGGTGCAAACTTACATTTTACCGCG GCCATCGATGCGACTTATGTCTTCTCGTTCAATGCCGCTGATAAAGAGACACCGATCCTTAAGGTCTACAACGAAGAGCC TTTTGTTGGTACAGAAGTGTTTATTCGAGGTGGCATGAATAGTTGGGGCACCGACGATACGTTAACCTACATGGGCGGCG GTATTTATCGTGCTGATATTTCATTAGCTGCAGGTAACCATGAGTTTAAGGTGGCATCAGATGATTGGTCGACAGTGGAT TATGGTTCTGGAGAATCAGACGCAGCAGTTTCCATTGAGGTCGCTGAGTTGCTGGCTGTTAGCGGCGCCAACATGACCTT TGAAGCTGAGGAAGCAACGACCTATGCGTTTATATTCGACGCATCAAATCGAGATGAGATCACCTTAACGGTGTATAAAG CTGAAATGTTTGCTGGTCATACTGTTTACATTCGTGGTGGCATGAATGGCTGGGGTGAGGTTGATGCTTTTAGTTATCAG GGCATGTCTAGCTACACCGTCGATATCGCGCTAGAGGCGGGTGATAATGAATTTAAAATTGCTACCGGTGATTGGTCTAC GGTTGATTTAGGCGCTGCCGCTGAGCAGGAAAATGTCTCACTTGATGTTGGACAAGTTTTAGCCTCAAAAGGCGCTAATA TGCATCTGAATATCACCGAAGCTGGCACGTATAAATTTACCGTTACAGGGCCCGATCCAAAGGCGCCAATGTTTAGTGTC AGTAAAGTCAATTAG
Upstream 100 bases:
>100_bases GTTGTAAAAAATTCAATCCAGGCAAGTCGTTGCATCAATCAGAAATAAAAAGACGCGGCTTGCTTAAATCAACGATTAAA TAATTTAGGAGAAATCACTC
Downstream 100 bases:
>100_bases TGCTAAGTGTTTGATGTGATAAAAAGCACTCATTTATTTTAAATTTATTTGTCAAAAGCGTGATAAAAACCCAGCTAAAA CTGGGTTTTTTGTCTAAATT
Product: family 13 glycoside hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1444_residues MSRISNNISLLALTISALSLAGCGGDSSEPGSVLLTCNVPMVPDAAGTSCVAPEPISCPAPTVPDENNEQCIVGADPTLP APVFTPAANQAVVYYNNVQDADNSPSDPTYDGYRLHTWNNDTCDAYAAPFDSSDWANGHQIDGIDPNYGAYWIVNLKEGY SDCGNFIIHIGTEGSGKALGDGDLSMPLMQDDEAFVRMNFTLHGEPSVFEYPILSLGVQPLSITGMSAHWLDADTLIWDQ DDADISSFKLHYAQKADISVEAEPDRILNSETVALTAMELSDAQKALIPHMAHWKAYSTNLTADEAKAIVKAQLVVAAHN GDDVPVAATYVQAAKVLDALYTAGESDADEAKLGLDYSDGSVTTSVWAPTAQALKLNIYNADKSLNRSEEMSFDAMTGIW SFKGDMSLDRLFYRFEVTVYHPLTKQLETVEATDPYSLNVSTNGRYSQFVNLSDDDLKPEGWDDHSVATINNPEDAVIYE GHVRDFSIRDESTSKANRGKYLAFTEEGTAPVEHLKKLVANGLTHFHMLPVTDIASINEDSAERIELTDTLGMLCEKIDN AADACSTQDMAATIETVLADSLPGSADAQAIVEAMRGLDGFNWGYDPHHFIAPEGSYASSSEGTARVLELRAMNKALHDM GLRVVLDVVYNHTSSSGLWDNSVLDKLVPGYYHRYNEESGVIERSTCCENTATEHRMMDKFVSDSMVILAKEYGFDSFRF DVMGHMPKQSILDARTAVQAVDADNYFYGEGWNFGEVADNRLFEQATQANMAGSEVGTFNDRIRESVRGGNLFKVEASDD ALRDQDTLRLSMAGNLKNYILKDFNGNSAKGSSFSWNSQPTAYTLDPADSINYVSKHDNETLWDNLQYKNPIGMSLDERV RVQNIAATLPLLSQGIPFLQMGGDLLRSKSMDRNSYDSGDWFNWVDFTKNSHNWNVGLPRKQDNEAKWQEIAGISANPNA AASMSEIEMASNVFNEFLSIRSQSPLFRLTTEAEIIERVGFHNVGKRQTQGVIVMSVDDGADLADLDPAVDALVVMVNAS ANEVSHTIPTAAGFELHPTLTSSVDSTVTGASFSAGEGEGSFTVPAYTSAVFVKLQGDAQGSGLAANATVGAPDVVPFGS TEVFVRGGMNDWGETDKLTYVGGGEYRIAITLAAGDYEFKVASADWSSVDFGGLSAEVAQVEEGIDEPLTLAGANLHFTA AIDATYVFSFNAADKETPILKVYNEEPFVGTEVFIRGGMNSWGTDDTLTYMGGGIYRADISLAAGNHEFKVASDDWSTVD YGSGESDAAVSIEVAELLAVSGANMTFEAEEATTYAFIFDASNRDEITLTVYKAEMFAGHTVYIRGGMNGWGEVDAFSYQ GMSSYTVDIALEAGDNEFKIATGDWSTVDLGAAAEQENVSLDVGQVLASKGANMHLNITEAGTYKFTVTGPDPKAPMFSV SKVN
Sequences:
NA
Specific function: NA
COG id: COG1523
COG function: function code G; Type II secretory pathway, pullulanase PulA and related glycosidases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA