Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212635955

GI number:

Start: 3341627

End: 3344476

Strand: Reverse

Name: Not Available

Synonym: swp_3185

Alternate gene names: NA

Gene position: NA

Preceding gene: 212635956

Following gene: 212635953

Centisome position: NA

GC content: NA

Gene sequence:

>2850_bases
TTGTATAAGAATAACTTACTCACCAACTCTGTACGCTTAGCACTCGTCAGTGGCGCTATGACTGCCGCATTCGCAGCTCC
TGCTGTATTCGCAGACGAAGAGGATAGTGTTGAGCGCATTGAAGTCACAGGTTCAAGAATTAAAAGAACTGATATGGAGA
CTTCCTCTCCCATTCACGTGATGGATGCGGAGCAGATAAAAATGAGCGGGTTTACTAATGTCGAAGACATTCTTAATCAG
CTGCCACAACTTGAAGCCGGAGAAAATTCATTTCTTTCAAATGGAGCAACTGGTACCTCGTCTCTAGATTTACGTGGTCT
AGGCAGTAACCGCACGTTAGTACTAATCAATGGTCGTAGAATGCAAGCCGGCAGTATTACATCTCAAGATGCGGATATTA
ACCAGATCCCAGCGGCTTTAATTAAGCGAGTTGAAGTGATGACTGGCGGAGCAGCGGCTGTTTATGGCGCGGATGCAGTT
GCAGGCGTCGTTAACTTTATAATGGATAAGAGCTTTGATGGTATCTCAATCAATGTTGGCGCTTCAGGTTACCAACATGA
TAATGATAACGGTTACATTCAAGGGTTAATGGATGAGAAAGGTTATGACTACCCATCTGGCAATACGGATATTGATGGTA
AAACCTATAATATCGACCTCACGATTGGCAGTGAGTTTAGTGATGGAAAAGGTCACGCTGTAGCCTATGCAGTTTGGCGT
CGAAATGATGAGTTACTGCAAGGCTCACGTGACTATGCTTCTTGTGTATTGAATGCAAAACAATCGGAATGTGCTGGCTC
TTCGACAACGCCTTTAGCACACTTTGATATTTATCCTGTAGTCAACGGCAATGTTGATTATGATCAAAATTATTGGGGCT
ATACCGATCCCAATGGCAATGGGTTTAAGCCTGATGATGGTTATCGATATAACTATGCACCAATAAATCATTTCATGCGT
CCCAATGAACGAATCTCTTTTGGTTCATTTATAAATTATGAAATAAACGATCATGCTCGTCCGTATGTGGAACTTTCGTT
TATGCAAAACCGGACTGCTGGTCAAATTGCTGAGTCTGGGACATTCTACGATGAAGAGATTTTGATGGATTACAATAATC
CATTAATGACAGACTTACAGAAGCAGCAATTGCAGGCTGAGTTTAATCAAACTGATGCAGATCAGTTCGTTGCCTATATC
GGTAAGCGTAATGTCGAAGGCGGTGCTCGTGCTAATAATCTTGAGCATAATTCATATCGTATTTTGACGGGAATTGAAGG
CGATATAAATGATAACTGGACTTATGATGTGAGTTTTAATTACTCCGCAACTTCATCATCATCTGTTTACATAAATGATT
TGCTGTCACCGAAGATAGCGCCAAGAGTTGGTGCTGTTGATACTGAATGCGTTGAAGAAGACGGTTGCCTGTATTACAAC
GTATTTGAGCCTGATGGAGTCACTGCTGAGCAAGCAGAACAACTGGCTGGTGTAGGAACGCAAACGGGATTGGTAACCCA
AACGATTTATAATGGTTATGTTACTGGCGATATCGGGGTTACAGTTCCTTCTGCTTCCGATGCTATCGCGATGGTATTTG
GTTTCGAGCGTCGTGAACAAAACTATGAACGAATTTCGGATACTATATATTCAGAAGGTCAACTATTGGGGCAAGGTGGC
CCTAACCCAAGCCTATTCGGTGAAATAGATGTGAATGAAGTTTTCACGGAAGTTCAAATTCCTGTTCTAGATAATTTAGC
ATTTGATTTGGGCGCTCGTTATTCAGACTATTCAACTACAGGTGGAGACTGGACTTATAAAGTCGGTGCCGATTATACAT
TAGCTGATAATTATATGTTCCGTGCAAGTTTTAACCGAGCTGTTAGAGCACCAAATGTAAATGAATTATTTGGTAGTCCA
GTGATTCAACTTTGGGATGGCTCTGATGGTTGTACTACCGATGATAAAGGCAATACTAAGTACACCGCAGCACAATGTGC
TAACACCGGGGTGACGGCTTCTCAATATGGTAACTTAAACCCTAATGATGCAGGACAATACAACGAGTTCTCAGGTGGCT
CACCAGATCTTGAACCAGAAGAAGCTGAGACATTAACGCTAGGGCTGGTTGCTAACCCAATAGATAACCTAAGTTTTTCT
ATTGATTACTTTAATATTGAAATGGAAAATGTGATTGACTATATAGGCGCTGAAAGAATTCTAGATATTTGTGCCGTTAG
TGGTGAATCTGATTTCTGTAGCAATGTGAACCGTAGCCCGTCAGGAAGCTTGTGGTTAGGAAAAAGTGGTTATGTTACAA
ATATTATAGGAAATGTAAGCAGTCGAACATGGGAAGGAGTAGATGCTTCTGCCAGTTATCTATTTGAATTGGCAAGTGGT
GATCTTTCTTTTGATCTGATTGGCTCATATGCAATGAAAAAGGAGATAAGGCCAGTCGTTGGTAAAGATGAATTCAACTA
TGACTGTGCAGGAACTGTTAACTCTGACTGTTTTGCATCTCCTAAATGGAGACATACATTGACAGCTAAGTACAGTGCAG
ATGATTGGGTATTAGCTGCAAAATGGCGTTACTATGGTGAAATTGATTATGATGGTACTGCGGATGAGCGCCTCGTAGAA
CAAGGTGGTATTGATGCGTATAACTACTTTGACTTGAATGGCAGCTATATTTTTACTGACTATATGTCAGTAACAGCAGG
TGTTAATAACATTTTCGATAAAGAGCCTCCAATGGTAGGTAATACTATTGCGTCGAATGCAAATACTGTTGCAGGTTTTT
ACGACACGCTTGGTCGCTTTATGCATGTGAGTTTAAACTTTAAGTTCTAG

Upstream 100 bases:

>100_bases
GTATCCCGGATGTTGCAAGGATGTAAACGCGCTAGTTTGGCGTCTTTGTAATTAATCAGCCTACTTAGGTAGATAAAAAC
AGTATATAGGGAGATTTACA

Downstream 100 bases:

>100_bases
TTAACCTCCATATGGTTACGGGCTTTAGTCGTCACGAAAGCATTCAAAATAGTTTGGTTTAGAATGCGTTAATGAAATCC
AGTACAGACTATTTGTACTG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>949_residues
MYKNNLLTNSVRLALVSGAMTAAFAAPAVFADEEDSVERIEVTGSRIKRTDMETSSPIHVMDAEQIKMSGFTNVEDILNQ
LPQLEAGENSFLSNGATGTSSLDLRGLGSNRTLVLINGRRMQAGSITSQDADINQIPAALIKRVEVMTGGAAAVYGADAV
AGVVNFIMDKSFDGISINVGASGYQHDNDNGYIQGLMDEKGYDYPSGNTDIDGKTYNIDLTIGSEFSDGKGHAVAYAVWR
RNDELLQGSRDYASCVLNAKQSECAGSSTTPLAHFDIYPVVNGNVDYDQNYWGYTDPNGNGFKPDDGYRYNYAPINHFMR
PNERISFGSFINYEINDHARPYVELSFMQNRTAGQIAESGTFYDEEILMDYNNPLMTDLQKQQLQAEFNQTDADQFVAYI
GKRNVEGGARANNLEHNSYRILTGIEGDINDNWTYDVSFNYSATSSSSVYINDLLSPKIAPRVGAVDTECVEEDGCLYYN
VFEPDGVTAEQAEQLAGVGTQTGLVTQTIYNGYVTGDIGVTVPSASDAIAMVFGFERREQNYERISDTIYSEGQLLGQGG
PNPSLFGEIDVNEVFTEVQIPVLDNLAFDLGARYSDYSTTGGDWTYKVGADYTLADNYMFRASFNRAVRAPNVNELFGSP
VIQLWDGSDGCTTDDKGNTKYTAAQCANTGVTASQYGNLNPNDAGQYNEFSGGSPDLEPEEAETLTLGLVANPIDNLSFS
IDYFNIEMENVIDYIGAERILDICAVSGESDFCSNVNRSPSGSLWLGKSGYVTNIIGNVSSRTWEGVDASASYLFELASG
DLSFDLIGSYAMKKEIRPVVGKDEFNYDCAGTVNSDCFASPKWRHTLTAKYSADDWVLAAKWRYYGEIDYDGTADERLVE
QGGIDAYNYFDLNGSYIFTDYMSVTAGVNNIFDKEPPMVGNTIASNANTVAGFYDTLGRFMHVSLNFKF

Sequences:
NA

Specific function: NA

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA