Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212635227

GI number:

Start: 2538574

End: 2541672

Strand: Direct

Name: Not Available

Synonym: swp_2422

Alternate gene names: NA

Gene position: NA

Preceding gene: 212635226

Following gene: 212635228

Centisome position: NA

GC content: NA

Gene sequence:

>3099_bases
ATGAATTTAGCAGAATTTGCAATTAGGCAACGTTTGTTTGTTATATTTTTTAGCGTGCTTTGTGTGGTCGTCGGGATTAT
TTCCTATTTTGAGCTTGGTAAGCTTGAAGATCCTTCATTTACAGTGAAAAGTGCGGTTGTGGTTACCTTGTACCCTGGTG
CATCCGCAAAGGAGGTAGAGGAGCAAGTCACTGATAAGGTAGAGACAAAATTACAAGAGATGGGAGCGATGTGGAAATTA
CGCTCATTGTCCCGCCCAGGCAGCTCAATGATATTCATTGACCTAAAGGAAACCACTAATTCCGATGAGTTACCGCAGCA
GTGGGATCTATTGCGCCGTAAAGTGAGCGATGTAAAGCTGACATTGCCAGCAACCGCGCAAATCAGTGTGGTTCAAGATG
AGTTTTCTGAAGTTTATGGCATGCTTTTCAGTGTTTATGGTGAAAACGCTGAACCAGAAGCGCTACGTCAGTATGCCAAG
GAGCTGCAACGCCGTTTTAAAACTGTTGATGGTATTAAGAAAATTGAGCTGCATGGTGTTCAAACCCAAGCAATTTATGT
TGATCTACCTGAAGAGCGTTTAGCCCAATATGGGATCTCTTCGGCTCAAGTTATTAATCAGCTAACAACCCAAAACCTGA
CTTACGACAGTGGTAGTTTTGAAGCAAGTGGCGAACGTATTAGAGTTCAACAGAGTAGTGATTTTAAATCGATTGAGGAT
ATTAAAAATCTAACGATTAAAGGCGGGATTGGTCACTATAGTACTGGCTTACTTCGACTTGGAGATATTGCCGATATAAG
CTTGGCTTACAAAACCCCTGCAACCAGCATAAGCCGTTATAATGGACAAACAGCAGTCACCCTGGCAGTAAGCCCAGTCA
AAGCCATCAATGTGGTCAATCTTGGCGATACAATGAGTCAAATTATTGCTGAGTATCAACAAGAGTTACCCGTAGGTATT
GAGATCGGAACCATTGCATTTCAGCCTGATGAAGTTGAGAAGTCGATTGCCGATTTCGTGACTAATTTACTGGAAAGTGT
GGCGATTGTATTTGCAGTTCTGCTGATTTTTATGGGCTTTAAAAGTGCCACAATCGTCGGCGGCAGTCTACTGTTTACCA
TCTTATTGACATTCATCTACATGTACCTCGCAGGTGTTGATCTTCAGCGTGTTTCTCTAGGAACGTTTGTACTGGCATTG
GGTATGCTTGTTGATAATGCGATTGTTATTACCGATCTGTTTATTGTTAAGTTAAATAAAGGTGTAGAGCGCACAAAAGC
GGCTATCGATGCTGTTAAAGAAACCTCAAAGCCGCTACTCGCTGCAACCATTATTGCAATCATGGGCTCGACCCCGGTAC
TTTTTTCACAAACCGATGCAGGTGAATTTGCAAGTTCTGTGTTCCTCATTATTTGTGCATCTTTACTGTTTTCATGGATT
GTTGCGGTCACTCTCACGCCACTTTTATGCTGGCTATGGATTAAGCCAAAGCTAAACAATGACCAACAGGAAGAAAAAGT
AAGTCGTTATCAACAAGCAGTTGTTTGGACTGTGATGAATCCTGTTAAGGCTATCTCATTAGTCGTACCACTATTACTGG
TCACAGCACTGGCTGTTCCTTATGTTGCCGTGAATTTTATTCCAAGCTCTGATAGGCCTATGGTGTTCTTAGATTATTGG
CAACCTAATGGTGGTGATATAGCTAAAACATCATCTGATATGAAGAAAATTGAAGATTGGTTATTGCAACAACCAGAGAT
AAGCAGCATTTCTAGCTATGTAGGCGCGAGCGCACCAAGGTTTTCTGTGACTGTTGAGCCTGAACCTTTTGACTCAAGTT
ACGGACAGATTGTCATAAATGTTAAGGATTTTGAGGGGATAGAGCCTTTAACAAAACGCGGCGAGAGTTGGTTAGCGCAA
AACTTCACTAACTCTGAACCTAGATTTAGAGCGCTTAAATTAGCGACAAAGGATAAGTTCAGCATTGAAGCGCGTTTTAG
TGGTAAAGACCCTGCAGTCTTGCATGACTTATCGAACCAAGCACAAGCAATCATGCAAGCTAACGCCAATACAAAATCCG
TAAGAGATGATTGGCGTCAACAAAGCAAGGTGATTGAACCTGTTATTAATCAAGAACAAGCGCGCAGGGCTGGGATCAAC
AGAACTGATATTTCATTAGCATTAAAGCGAGCATCAGAAGGAGTAACGCTAGGGACATTAAACCAAGGCGATCAACTGAT
CCCAATCAGTTTTAGGAGTGCAAACGCCAACTTAAGTTACTTAGATACTCTGCCAGTAAAGTCTTTGTTAGGTACTCATA
GCGTACCGTTAGGCCAAGTGGTTGATAAATTTGAGCTTAAACCTGAAGAGAGCATGATCTGGCGTCGCAATCGAGTGCCA
ACTATCACTGCACAAGCTGATGTATTTGATGCGACGCCCGCTGAAGTGAGGAATCAAATCAAGGATCAGATTGAAGCTAT
AGAGCTACCAGCTGGTTATAGCTTTGAGTGGGGCGGTGAATACTACGATGAGAATCGTGCGATTACTGATACGTTAAGCC
AAATGCCGAAAGCACTTTTGATGATGGTGGTCATCATGGTTGCAATGTTTAATGGCTTTAAGCAACCGATCATCATTTTA
ATTACGCTGCCACTGGCTGCTATTGGTGCAACCTGGACGCTATTGTTGCTTGATAAGCCATTTGGTTTTATGGCGCTTAT
TGGTGCGGTGACTTTATCAGGGATGATCATTAAAAATGGCATTGTACTCATGGATCAAATTGAACTGGAGCGAGCTAAGA
AGATCCCATTAAGAGAAGCAGTTAAATCTGCCACGTTAAATCGAACCATGGCGATATCAATGGGAGCACTGACTACTGCT
TTAGGAATGATCCCGTTAATAAGTGACCGGCTATTTGATCAAATGGCTGCCACCATCATTGGCGGGCTAGCCGCGGCAAC
ATTGCTATCACTGTTTATTATGCCAGCCTTCTATTGCCTGTTTTATAGAAACTCAGAGCATCTAGAAGACGAAAGCAAAG
CAGATGACAATAAAAATAACGAAATAGCCTTAACGACTGCGACAGTGGAGCAAAAATAA

Upstream 100 bases:

>100_bases
AAGCGGGTGACACTATTGTCACTGCCGGTGTGCATTACCTCAAGCCTTTACAGATAGTTAAAAATACCATCGCGAAGAAC
GTGAGTTACTAGAGGCTTTT

Downstream 100 bases:

>100_bases
TATGAAACTTATAAAACTCGCACCGCTTGCAATAGCAATGATGCTTTCAGGTTGTGCTGTTGGCCCCGATTATACGCAGC
CAACAAGCACACTTGAAACT

Product: efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1032_residues
MNLAEFAIRQRLFVIFFSVLCVVVGIISYFELGKLEDPSFTVKSAVVVTLYPGASAKEVEEQVTDKVETKLQEMGAMWKL
RSLSRPGSSMIFIDLKETTNSDELPQQWDLLRRKVSDVKLTLPATAQISVVQDEFSEVYGMLFSVYGENAEPEALRQYAK
ELQRRFKTVDGIKKIELHGVQTQAIYVDLPEERLAQYGISSAQVINQLTTQNLTYDSGSFEASGERIRVQQSSDFKSIED
IKNLTIKGGIGHYSTGLLRLGDIADISLAYKTPATSISRYNGQTAVTLAVSPVKAINVVNLGDTMSQIIAEYQQELPVGI
EIGTIAFQPDEVEKSIADFVTNLLESVAIVFAVLLIFMGFKSATIVGGSLLFTILLTFIYMYLAGVDLQRVSLGTFVLAL
GMLVDNAIVITDLFIVKLNKGVERTKAAIDAVKETSKPLLAATIIAIMGSTPVLFSQTDAGEFASSVFLIICASLLFSWI
VAVTLTPLLCWLWIKPKLNNDQQEEKVSRYQQAVVWTVMNPVKAISLVVPLLLVTALAVPYVAVNFIPSSDRPMVFLDYW
QPNGGDIAKTSSDMKKIEDWLLQQPEISSISSYVGASAPRFSVTVEPEPFDSSYGQIVINVKDFEGIEPLTKRGESWLAQ
NFTNSEPRFRALKLATKDKFSIEARFSGKDPAVLHDLSNQAQAIMQANANTKSVRDDWRQQSKVIEPVINQEQARRAGIN
RTDISLALKRASEGVTLGTLNQGDQLIPISFRSANANLSYLDTLPVKSLLGTHSVPLGQVVDKFELKPEESMIWRRNRVP
TITAQADVFDATPAEVRNQIKDQIEAIELPAGYSFEWGGEYYDENRAITDTLSQMPKALLMMVVIMVAMFNGFKQPIIIL
ITLPLAAIGATWTLLLLDKPFGFMALIGAVTLSGMIIKNGIVLMDQIELERAKKIPLREAVKSATLNRTMAISMGALTTA
LGMIPLISDRLFDQMAATIIGGLAAATLLSLFIMPAFYCLFYRNSEHLEDESKADDNKNNEIALTTATVEQK

Sequences:
NA

Specific function: NA

COG id: COG0841

COG function: function code V; Cation/multidrug efflux pump

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA