Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212635085

GI number:

Start: 2372736

End: 2374559

Strand: Direct

Name: Not Available

Synonym: swp_2277

Alternate gene names: NA

Gene position: NA

Preceding gene: 212635084

Following gene: 212635086

Centisome position: NA

GC content: NA

Gene sequence:

>1824_bases
ATGACAACATCTCCTAAAAGTGAAGTGTGGACAGTTTTTAAGCGCCTACTGGGCTATTTAAAACCTCTTAAAGCTGTTTT
ATTTTTTGCCGTCGTTGGCTTAACGATGTACGCATTAGTCGATGCAACCTTTATTGCAGTAATAAAACCATTTATTGATG
AAGGTTTTGGTGGACAGGCTAGCCAAATCCCAACAGGGGCTGGTGGGCTTACTAACTTAGATCTTGGCACCAGTGGTGGC
TTTAATTCAGGCAGTGATGTACTGATGATGGCGCCTTTTGTGGTGATCGTGTTATTTAGCCTCAGGGGACTGGCAAACTT
CTTATCGACCTACTGTATCTCTTACATGAGTGCACGGGTGATTATGGATCTGCGCCAAGAGGTGTTTGAACATTATCTAA
CACTACCCGTTAGCTACATTGATAGTGAGAATACGGGGAATTTAATCTCTCGTGTCACCTACGATACAGAACAAATTGCT
CGCGCTTCGGGCAGCGCCCTAATTACCATTGTCCGCGACAGTATCACTGTTGTCGGCATGATTGCCATTATGTTTTACTT
CTCATGGAAACTGTCGCTGGTAATATTTATTATTGGTCCAATTATCGGGGTAGTCATTACGGTTGTGAGTCGTCGATTCA
GAAAGGTGTCTAAAAATATCCAAGCAGCAATGGGCGGCGTGACAGCTGCAACAGAGCAGATGATTAAAGGCCATAAGAAT
GTACTGTCTTTTGGCGGACAAGAAACAGAAGCGCAGCGCTTTGCTAAAGTTAATGACCAAAATCGCTACCAGACGATGAA
ACTCGCCACAGCGCAAGCGATTAGCCAACCTTTGGTGATGATTATTGGCTCATTTGCTATTGCCTTTATCTTATACGCTG
CCAGTATCGATAGCATGAAAGCAGAGCTAACCGCCGGTACATTTGCCACGATTCTGGGGGCGATGTTGGCAATGTTACAA
CCGATTAAAAATTTAACCCGTGTTAATGCTGAATTCCAGCGTGGTATTGCTGCATGTACAACCGTATTTGAATTACTTGA
TACTAAACCTGAGAGTGATACCGGTACGTTAGATGTAGAAAGAGTCAAAGGTGAATTGGCGTTTAACAATGTTGATTTCA
GCTATCCTGGACAGGAAAAACTGGCATTAAACGGTATTGATTTTACCGTAGAGCAGGGAAAAACATTGGCGCTAGTTGGG
CGTTCAGGCTCAGGTAAGTCGACTATCGCAAGCTTAGTGACTCGGTTTTATACCGGTCTCAAGGCGGGCGAAATTACCCT
TGATGGCAGTAATATTAATGACTACACGTTGGCATCACTGCGCAGCCAAGTTGCGCTAGTATCGCAGCAGGTCACGTTAT
TTAATGATTCAATCGCAAATAATATCGCCTATGCCTATCCAGGTGAAGCAACGAAGGAGCAGATAATCAACGCAGCCACT
CTTGCTCACGCGATGGAGTTTATCGAGCCTATGCCTGAGGGCCTCGACACCCAAATTGGTGAAAATGGCGTTATGCTTTC
TGGTGGCCAAAGACAACGTATTGCTATCGCAAGGGCGATATTACGTAATTCACCTGTATTAATTTTAGATGAAGCAACTT
CTGCGCTTGATACTGAATCCGAAAAGGCGATTCAAGACGGTTTAGATAACCTTAGGCATAATCGTACATCAATCGTTATT
GCTCATCGCCTATCAACAATTGAAAGTGCTGACCAAATTCTTGTTGTTGATCAGGGGGAAATAGTTGAGCGCGGTACGCA
TACATCGCTACTTGAAAAGCAAGGCATCTATTACAACCTATACCAAATGCAGTTTGGAAGCTAA

Upstream 100 bases:

>100_bases
CTCGGATTTTGCACCATTTTGGTATAACCAAGTGTTTAGGTTTGGTGAGAACGAAAATCCAGAGTAGAATAGTTTTTTTG
CCAACATCTTAAGTCTCCCA

Downstream 100 bases:

>100_bases
ATGCAATCTTGGGTTAACAAACTATGGTATGACGGGCATGTTCTGCGCTTTGCGCTTTGGCCATTGTCACTACTATTTGC
AGCTATAACTTGGTTCAGAA

Product: ABC transporter ATP-binding protein MsbA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>607_residues
MTTSPKSEVWTVFKRLLGYLKPLKAVLFFAVVGLTMYALVDATFIAVIKPFIDEGFGGQASQIPTGAGGLTNLDLGTSGG
FNSGSDVLMMAPFVVIVLFSLRGLANFLSTYCISYMSARVIMDLRQEVFEHYLTLPVSYIDSENTGNLISRVTYDTEQIA
RASGSALITIVRDSITVVGMIAIMFYFSWKLSLVIFIIGPIIGVVITVVSRRFRKVSKNIQAAMGGVTAATEQMIKGHKN
VLSFGGQETEAQRFAKVNDQNRYQTMKLATAQAISQPLVMIIGSFAIAFILYAASIDSMKAELTAGTFATILGAMLAMLQ
PIKNLTRVNAEFQRGIAACTTVFELLDTKPESDTGTLDVERVKGELAFNNVDFSYPGQEKLALNGIDFTVEQGKTLALVG
RSGSGKSTIASLVTRFYTGLKAGEITLDGSNINDYTLASLRSQVALVSQQVTLFNDSIANNIAYAYPGEATKEQIINAAT
LAHAMEFIEPMPEGLDTQIGENGVMLSGGQRQRIAIARAILRNSPVLILDEATSALDTESEKAIQDGLDNLRHNRTSIVI
AHRLSTIESADQILVVDQGEIVERGTHTSLLEKQGIYYNLYQMQFGS

Sequences:
NA

Specific function: NA

COG id: COG1132

COG function: function code V; ABC-type multidrug transport system, ATPase and permease components

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA