Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212634550

GI number:

Start: 1764512

End: 1767352

Strand: Direct

Name: Not Available

Synonym: swp_1716

Alternate gene names: NA

Gene position: NA

Preceding gene: 212634549

Following gene: 212634551

Centisome position: NA

GC content: NA

Gene sequence:

>2841_bases
ATGTCATATCAGGTGTTGGCCAGAAAGTGGCGCCCTGCTAAATTTGAGCAAATGGTTGGTCAGTCGCATGTCTTACATGC
CTTAACCAATGCGCTCACTCAGCAAAGATTGCATCATGCTTATCTGTTTTCTGGCACACGAGGAGTGGGTAAAACCAGTC
TTGCACGTCTTTTCGCTAAAGGCTTAAATTGTGAACAAGGTGTTACAGCTACGCCCTGTGGTCAGTGCTCAGCGTGTGTA
GAAATCGCAGAAGGGCGTTTTGTCGATCTTATAGAAGTTGATGCTGCATCGCGCACTAAAGTTGATGATACCCGTGAACT
TCTTGATAACGTTCAGTACCGACCTAGTCGTGGCCGTTATAAAGTCTACTTGATTGATGAAGTGCATATGCTGTCTCGCA
GCAGTTTTAATGCACTGCTTAAGACGCTAGAAGAGCCACCAGAGCATGTTAAGTTTCTGCTGGCGACAACCGATCCTCAA
CGTTTGCCTGTAACAGTACTGTCGCGTTGCTTGCAGTTTAATTTAAAAAGTCTAACTCAAGACGAAATCAGTGATCAGCT
AACTAATGTGTTAACCGCCGAGTCACTGGAATTTGAAGCCACAGCGTTAACATTGCTTGCTAAAGCTGCTAATGGCAGTA
TGCGTGATGCATTAAGCTTAACCGATCAAGCGATAGCATTTGGTGCAGGACAAGTGAAACTTGAATTAGTGCAGACCATG
CTTGGCAGCATTGATGAAAAGCAGGTTATCGCTTTGCTTGAAGCACTCGCAAAAGCGGACGTTATGGCACTGATGCAAGT
CAGTGCTGGTGTATTGTCTTTTGGTGCCGAACCTGAAGAGGTGTTACGTAGCTTATTAGAGTTACTGCATCAAATTACTT
TGACACAATTTGCTCCCGCTGCAGCACAAATGTCGCTTTATAGTGAGCAGATAAAAGCGTTTGCACAGCAGTTATCACCG
GAGCAGGTGCAACTGTATTACCAGCTATTACTGACTGGACGTAAAGACTTACCTCATGCGCCAGATCCTAAGTCTGGGCT
TGAGATGGCACTGCTAAGAGCCGTTACATTTGTACCAGAGCAACCTGTTAGCAAATGGGTGACTGATAGTCCAGCAGCGA
TAGCTATCCCACAGGCAGCAGCACCTGCAATAACACAATCATCTGAGTCTGCTAAGCCGCAAGCAATAGTTGCCCCACAG
CAGGAAGTTAAAGCTGCGCCTGTTGAAGAGGCTGCGGAAAAAAAAACAGTTTTAACCGCTAACAGCGTCAATGATAAGCA
GCCGAATCAAGATCCAGTTGCTGCAGATACGCTAAAACCTGAGTTAGCAGCCATTGAAGCCAGCGTCGGTGCGCCTGTAT
CCAGTACGCTTGAGAGTATGAATAGCGAAATGGCGGTCATACTCAGTCAAGCACAGAGCCAAGGCTTTTCAAGCTCAGAC
ACTTCAGAGACTAAAGATATTAGTACTGAGCAGACCCAGAGCGAGGTTAAACCGCCAGTTAAAGCTCAACAGCCTGCAGA
TACGAGTACCTCGGATGATGCTACAGAAATAAGCAGTATTGCAGAGCAATTGCCAAAGCCAAGCGACATTGACTCAAATT
TAAATAACACTGTCGTTGACAATGCTAGCGTTAAATTGGAAGCACAAAAGGGCCAGCAGGTTCAAGATAGCCAATTCGAC
GGTGACGATGATCTAGCTGCATACTCGCAGTACGCGGGGGCGTACGATACTGACATTGATGACAGCGATTTTGACTTTGC
ACTAGAGCAGTCCGAACCTTTAGCGCAAGACATCACAGACCGCAGACAAAATGCAGCGCAGTCAGCAGCAATATCGACTT
CACTGGTGCCCAGTCAGCTAGAGAGTCAACCCAGCGCAGAAGCTAGCTCGGCAAGTGATGACATTCTAGATGCTGTATTA
GCCGCTAGAGATTCATTACTCGACGGTATAGGTGAAGAAGATCCTCAGGAGAGTTCAGCAAAAAAGTCCGTGGCTGAACG
CAAGCCGTTTGCACCACCTGTTAGAAAGCCTAAAGCAGAACCTGAAATAGATAATAGTGATCCTGCAACAGTTGGCGCTA
AAAGCGATCAAGCGCAGGAAAATATAAAAGCCGCGAATGCAGACAATCAAGAGGAGACTTTTGACCGGCCACCTTGGGAA
GAACCTCACGCGCAAGATCCAACGCCTAGGTTCGATGACGTAGCCGTTGAGAAAGAAGCTAATAAAGCTGCTGACAATGC
CGCTGTAGAGCCTAAACGAACGCCTCAGCCACAAAATCAAACAGAGCAGCAGAGCAAGCCGCCTGTTACATCGCTTGATT
CAACTTCAGTTCAGGATGTTGAGTTAAACTTACCTGCATTGCCTAGCGGTGAGATAACCGGTAACGATATCGATCTTAAA
TGGTATCGCTTCATGGCTGACCTTGAAGTGGGTGGGCGAGTAAGACAACTTGCGGTCAACTCTGTTTGCCACCAGTTTGA
ACAACCTTTATCGTTGTTGCTCAAACCGGATCAAAAGCACCTTGGTGCCGATGTGGCTATTAAGCAGCTAGAAGAGGCGA
TGAGTAAAGCACTTGGAGAGCCAAGTGAAGTGCGGATCTCTGTTGGCGTCGATAGCTCGCGTGAGACCCCACTTGAAGTG
AGACGCCGCTTTCACAAAGAGATATTAGCTCAAGCGCATCACGGGATGATTACCGATGATAACGTGCGCTGGTTGAGCGA
AAACATGGGCGCACAATTAACGCCAGACTCATTATCTTATGCGCCAGAATTGCTGGTTAATAAAGGAAAATCGATAGAAT
TGGTCGATATGTCGAACTTTAAGCGGTTACCTGAGTCATAA

Upstream 100 bases:

>100_bases
TGAACGCTTGATATGGCATGTAAAACCTTTGCATGCTATTGTTCAAATAAGTCGAGGAGCGTGCTCCCGTAATCATATTC
ATGACACGTTGGGGAGTTCC

Downstream 100 bases:

>100_bases
TTTTACAATTGAAATTTCAGCTTTCATTGCTAATCGTTCTATATTTAGTAAGATTAGCGCAGTTTATTTGTTGTGATAAA
TAATAGAAGAGAATCAGAGT

Product: DNA-directed DNA polymerase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>946_residues
MSYQVLARKWRPAKFEQMVGQSHVLHALTNALTQQRLHHAYLFSGTRGVGKTSLARLFAKGLNCEQGVTATPCGQCSACV
EIAEGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRYKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQ
RLPVTVLSRCLQFNLKSLTQDEISDQLTNVLTAESLEFEATALTLLAKAANGSMRDALSLTDQAIAFGAGQVKLELVQTM
LGSIDEKQVIALLEALAKADVMALMQVSAGVLSFGAEPEEVLRSLLELLHQITLTQFAPAAAQMSLYSEQIKAFAQQLSP
EQVQLYYQLLLTGRKDLPHAPDPKSGLEMALLRAVTFVPEQPVSKWVTDSPAAIAIPQAAAPAITQSSESAKPQAIVAPQ
QEVKAAPVEEAAEKKTVLTANSVNDKQPNQDPVAADTLKPELAAIEASVGAPVSSTLESMNSEMAVILSQAQSQGFSSSD
TSETKDISTEQTQSEVKPPVKAQQPADTSTSDDATEISSIAEQLPKPSDIDSNLNNTVVDNASVKLEAQKGQQVQDSQFD
GDDDLAAYSQYAGAYDTDIDDSDFDFALEQSEPLAQDITDRRQNAAQSAAISTSLVPSQLESQPSAEASSASDDILDAVL
AARDSLLDGIGEEDPQESSAKKSVAERKPFAPPVRKPKAEPEIDNSDPATVGAKSDQAQENIKAANADNQEETFDRPPWE
EPHAQDPTPRFDDVAVEKEANKAADNAAVEPKRTPQPQNQTEQQSKPPVTSLDSTSVQDVELNLPALPSGEITGNDIDLK
WYRFMADLEVGGRVRQLAVNSVCHQFEQPLSLLLKPDQKHLGADVAIKQLEEAMSKALGEPSEVRISVGVDSSRETPLEV
RRRFHKEILAQAHHGMITDDNVRWLSENMGAQLTPDSLSYAPELLVNKGKSIELVDMSNFKRLPES

Sequences:
NA

Specific function: NA

COG id: COG2812

COG function: function code L; DNA polymerase III, gamma/tau subunits

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA