| Definition | Shewanella piezotolerans WP3 chromosome, complete genome. |
|---|---|
| Accession | NC_011566 |
| Length | 5,396,476 |
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Identifier: 212634335
GI number:
Start: 1528000
End: 1532565
Strand: Direct
Name: Not Available
Synonym: swp_1488
Alternate gene names: NA
Gene position: NA
Preceding gene: 212634334
Following gene: 212634336
Centisome position: NA
GC content: NA
Gene sequence:
>4566_bases ATGAAATCAAAAACAAGTGTCTCACGCTTGTGTTGGTTAACTCTTTTTGCCAGTACCTTTGCCGCCCAAGCGGGTGCGAG TCAAAAAGAGATCACTACGCAAAAATCAGACAAGTTTCCCTTTGCCGCTGTCGCCGCTAAACATGATGGCGAAACTTGCG GTACTGACCATAACGGCCAAGATTGGCATCAACTGCAAACAGAGTTCGCACAGCAAATAAGAGCAACAAAGTCGCAGAAA TCACCAATGATGCGCAGTATGAGCGCAGCATTTCAGACAAACTCCTTAATGGCATCGTCAGGTATTTCATCGTTACAGAC TAACGCTGTCAGCGCGGTTGAGGGCAGTGTTGCAGTTGAGGGGCGCTACTACATTCCTGTCGTGGTACACATTTATGGTG AGATGTATAACTGTAGCGATGACAGTGATAAATGTTTGACGGATAGTAAAATCAACGATGCGATCCGCAAGCTCAATGAT GACTTCCAAGGACTTTCAATCGATGATCCTGAAGTCTCACCACAGTTTGCTGCCATTCGAGAAAACTTAAATATTGAGTT TGTGCTGGCAAAGAAAGACCCAAATGGTCACAGTACTAACGGTATTGTTCGTTATGATCATGAGCAAGCAGGTTACGGTA ATGGAGACAGTGAAACCAACGCCAAAATAGCCAGTGATGCATGGGATAACTTTAAATACATGAACTTGTATTTAATGCAT GACTTACATGACGACAATGTTGGTAATAACTCGGGCATCGCTTGGTATCCTGATGTGTCTATGTCTACCGCTGGCACATC GCGAGTGGTTTATAACGGACATTACACCGGGCTTAATACCAGTGAGAACTTCCGTTCAGTATTAACCCACGAGTTTGGTC ATTGGCTGAACCTCATTCATACCTTCGAAACCAAGTCATGTTCGATTACCAATGAGGCATTTTGCGCCACAACCGGTGAT AAAACCTGTGATACCCCACAGATGTCTTTGCCATCGCAGATGCAAGCAAATGCTAAAAACTGTCTAGGTCAGCCGACCAA TACAGAAAACTTCATGCACTATACCGACAATTACGCCATGTTCACTCAAGATCAAGTACAGCGTATGACGGCTGCTTTGC ATGGACCCTCACGGTCAACACTGTGGTCAAATGAGAACCTTATTGCCACAGGCTTAGAGTTACTTACAAGTGACTCTGAG CGCTATTGGGATGGGATCTCAGGTGTTGATAGTGAGCCAGAAGGAACAGTATTAGAAACGGTTGAGAATATATCAGCGCC ATTAGATGGTATTGAAACGTTTGAATTCAACTTACCGCATGGTGCGACCAACATTCTGTTCCACCTTGACGGACATACAG CCGATCCCGATATGTACATATCAAAAGGTGAAGAACCAACTCATGATGGAGCAGGTAATTGGGATGCGGACTATATCTCT TTTAACTCCCCTGGTTCGACCGAGTCTGTGTCGATAGATATACCCGATTACAACCAACCTTATTACGCATCAATTCATGC TTTCACTGAATTTGAAAACTCACGTTTAAGAGTTATTCAAGGTAACGATCCTTATCTTGAAGAGGGAGAAAGTCGTTACA CGCTGTTAAAAGTTGAGAATTTAAAGGCTGACAAAACTGATAATGCTTGGACAGATCGTCCAGGTAAAGTGCATAACTTC CAGTTTACAGTGCCAGATGATGCTACCCGAACGGTCATCATGGTTCCGGGCGGTTACCATGGTCCAGTTATGGCATCAGG AGTGCCAAACTTTAACGGCGATTTAGATCTGCACGTAAGCCGTAACCAAGAGGTTTCATTAGAAAATTATGACTGTCGTC CATTTAGTTGGAAAGGTCTAGCAGAATTTTGTGAGTTTGACGGTGGCGGCACCTACAATGTGATGATCGATCCGTTTGCC ACTTATACTGACGCGACATTGCATGTGTATTATGAAACAGCAAATACAGGCAATCAGCTGCCTTATGCCAATACTAATGG CAATAAGTACTTAGAGGCCGTTGGCCATGCCATTGAATTTAGCAGCATAGGTTCGAATGATCCTGATGGTGAAATTGTTA GCTATGAGTGGGATTTTGGTGATGGTGCCGTTAGCACTGAACAAGAAGTCGCTCATACTTACACAGATACCGGTGAATAC AATGTGACGCTAACAGTGACTGATAACAGTGGTGAATCCACTACAGCGTCGACGTTGGCGATAATCACCGAGCAATCGCC AAATGATGCGCCACTTTGCTCAAACTGCGATCGTGTCTACCTTAACGATGAAATAGCCTTATCGTCATTTGAAGGTGATA CACCGCGTACTTACCAATTTGAAGTGCCAGTGAATGCTTCGCTAGTGACCTTCGAGCTGGTTAATGGTTACAACGGTGAT CCAGATATTCACGTTAGCCTTAACCAAGCAGTGTCGACTGAAATATACGACTGTCGTCCATGGGAAGCACCTGGACAAAC TGAGTTATGTCAATTAACGAGTGGCGGTATTGTCAATGTGATGATCGATCCATTCCATGATTATGATTCCGTTAGATTCA GAGCCTACTACGATATCGATAAAGGCGTGACCCCGATAGAGCCCAACAAGCTGCCAATTGCCAACGCTGGCACTAGCTAC AATGGTGTAGCGGGTGAAGCCATTAACTTTAATGGCCTACAATCAAGCGATGAAGATGGCAATATTGCCTTATATACTTG GGACTTTGGCCATGGTGTAACAACCACTGGCGCAACCGTTGACCATGTATACGCCAATGCAGGTACCTATTTTGTCACAC TCACAGTGACCGATAATGGCGGCGCAGTAAACTCTAGTACAGTTGAAGTCACTATTTTACCAGTAGGTGATATGGACGGT GACGGTAATGTTGATAGCGATGATATCAACGCACTGCAAGCTGCAATCAGCCAAGGTTCTGCAATTGATGCAAGCTTTGA TTTGAACAATGACGGTGTCATTAATGGCGCGGACGTTGCGTTAATGAGCGGCATCTGTTCCTTTGACAACTGCAGTAATA TCGCACCACCGCCACAGGCACCTGTTGCTGTCTCTGCGGCATTGGACAACAACGTCCAGGTGAATACAGACGTAAGATTC AGCAGTGCAGGTTCTAATGATCAGTACGGTCAGATCGTGACATATGCTTGGGATTTCGGCGATGGAAATAGCAGTAACTG GGCCGATCCAGTGCATCAATTTGCTGAGCCTGGAATTTATGATGTAACGCTGACACTTACAGATAACGATGGCATGACAG CAACAAGCACTACCCAGGTGAATATTGACCATGCGCCGCTTACTGATGTTTGTCGCACTGAGCCTGCTGCAAACGAACGA GACTTGATTGCCTCTGTACCCGTTTGTGTTGGCACTGAAGATAGTTTAACCATTGCGCTGGTTAATCGTCATCAAACGGT TGCTATCTCTATGGTTAATGCGGCAGATGATGCGCTGATTTACTTCGGCTCAGGTAGCTGGCCGAATATTAATACAGGAG ACTACAGCGCCGTATCAACTAGCCAAGATGGCCAGCAATGTGCCTTCTATACGATTCCTGATGATGCGAAAAGCTGGGGC TATATAGAGTTAACTGGGGCCGTTGCAGGTGCAACAATTGTTGTTGACTATGATGTAGCGTCTTGTCGTCCAACAAGCCT AGTGACTGATGATAGCCTGCAAAATGGCGTTAGTCAGCTAGCTTCAGGTCAGCGTGATGAAGAGGTGCATTTTAGCATGA ATGTATCTGCTGGAGTATCAGCCTTAACCTTTGCAACAGCAGGTGGCACGGGTGATGCGGATATGTATGTTAAGTTTGGA TCTCAACCGACAGTCAGTGACTATGATTGCCGCCCTTATAAAGGCGGTAACCTTGAAAGCTGTAACATAGATAATGCTCA AGCTGGTACCTACCATGTAATGCTACGTGGCTACCAAGACTTTAATGACGTGAGTGTTACTGGGCAGTACGTTGCTGCAG GTCATAGTAATCAGGCGCCCGTAGCGCAAATTGACGGCCCGTTTGTGAGTAATATTGGTGACAGTATTACCATGAGCAGT ACCTCAACAGATGTTGACGGCTCAATTGCTAATTACCTATGGGATCTCGGTGATGGCACAACCAGTAATTCAGCTACGGT AAACCATACGTTTGCTGCAGCTGGGATCTATTCCGTTACGTTAACGGTTACTGATAATGAGGGCTCTACTAGTACAGCCA CCACTCAAGCAAGCATCTCAGTACTTCAATCAGGCGTTGCGACGTTAGTTTCTGGTACTACAGGTGCTGAAATAGTCTAT CAAATGCAAGTGCCAGCAGGCGCGAGCAACCTAAGCTTTAGTACTAGCGGTGGCAGTGGTGATGCAGACTTGCATGTGAA ATTTTCTAGTCAAGCGACCTCATCTGACTTTGACTGTCGTCCTTGGAAAAATGGTAGTAATGAAACCTGCGTTATCGACA ATGTGCAAGCGGGGACTTATTACATCATGTTGCAGGGTTATAACGACTTTACTGGTGTGCAATTGCTAGGTAATTACAAC CTTTAA
Upstream 100 bases:
>100_bases ATTTCAGCATGGAAATGTAATGAATTTATCACAATAAAGTTACAAGCTTATTACTAAAGCAGGAATTTAAAATCACTCAA CAAATTGAACAGGATAAAGT
Downstream 100 bases:
>100_bases TGCACGAGTAATATTGTATGACTCATTCAAAGGCCTCGCTTTGGAGGCCTTTTTAATGGGTTAGTTACACTCGCTATTTA GCCTCTCACTAATTACCTAC
Product: collagenase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1521_residues MKSKTSVSRLCWLTLFASTFAAQAGASQKEITTQKSDKFPFAAVAAKHDGETCGTDHNGQDWHQLQTEFAQQIRATKSQK SPMMRSMSAAFQTNSLMASSGISSLQTNAVSAVEGSVAVEGRYYIPVVVHIYGEMYNCSDDSDKCLTDSKINDAIRKLND DFQGLSIDDPEVSPQFAAIRENLNIEFVLAKKDPNGHSTNGIVRYDHEQAGYGNGDSETNAKIASDAWDNFKYMNLYLMH DLHDDNVGNNSGIAWYPDVSMSTAGTSRVVYNGHYTGLNTSENFRSVLTHEFGHWLNLIHTFETKSCSITNEAFCATTGD KTCDTPQMSLPSQMQANAKNCLGQPTNTENFMHYTDNYAMFTQDQVQRMTAALHGPSRSTLWSNENLIATGLELLTSDSE RYWDGISGVDSEPEGTVLETVENISAPLDGIETFEFNLPHGATNILFHLDGHTADPDMYISKGEEPTHDGAGNWDADYIS FNSPGSTESVSIDIPDYNQPYYASIHAFTEFENSRLRVIQGNDPYLEEGESRYTLLKVENLKADKTDNAWTDRPGKVHNF QFTVPDDATRTVIMVPGGYHGPVMASGVPNFNGDLDLHVSRNQEVSLENYDCRPFSWKGLAEFCEFDGGGTYNVMIDPFA TYTDATLHVYYETANTGNQLPYANTNGNKYLEAVGHAIEFSSIGSNDPDGEIVSYEWDFGDGAVSTEQEVAHTYTDTGEY NVTLTVTDNSGESTTASTLAIITEQSPNDAPLCSNCDRVYLNDEIALSSFEGDTPRTYQFEVPVNASLVTFELVNGYNGD PDIHVSLNQAVSTEIYDCRPWEAPGQTELCQLTSGGIVNVMIDPFHDYDSVRFRAYYDIDKGVTPIEPNKLPIANAGTSY NGVAGEAINFNGLQSSDEDGNIALYTWDFGHGVTTTGATVDHVYANAGTYFVTLTVTDNGGAVNSSTVEVTILPVGDMDG DGNVDSDDINALQAAISQGSAIDASFDLNNDGVINGADVALMSGICSFDNCSNIAPPPQAPVAVSAALDNNVQVNTDVRF SSAGSNDQYGQIVTYAWDFGDGNSSNWADPVHQFAEPGIYDVTLTLTDNDGMTATSTTQVNIDHAPLTDVCRTEPAANER DLIASVPVCVGTEDSLTIALVNRHQTVAISMVNAADDALIYFGSGSWPNINTGDYSAVSTSQDGQQCAFYTIPDDAKSWG YIELTGAVAGATIVVDYDVASCRPTSLVTDDSLQNGVSQLASGQRDEEVHFSMNVSAGVSALTFATAGGTGDADMYVKFG SQPTVSDYDCRPYKGGNLESCNIDNAQAGTYHVMLRGYQDFNDVSVTGQYVAAGHSNQAPVAQIDGPFVSNIGDSITMSS TSTDVDGSIANYLWDLGDGTTSNSATVNHTFAAAGIYSVTLTVTDNEGSTSTATTQASISVLQSGVATLVSGTTGAEIVY QMQVPAGASNLSFSTSGGSGDADLHVKFSSQATSSDFDCRPWKNGSNETCVIDNVQAGTYYIMLQGYNDFTGVQLLGNYN L
Sequences:
NA
Specific function: NA
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA