Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212634335

GI number:

Start: 1528000

End: 1532565

Strand: Direct

Name: Not Available

Synonym: swp_1488

Alternate gene names: NA

Gene position: NA

Preceding gene: 212634334

Following gene: 212634336

Centisome position: NA

GC content: NA

Gene sequence:

>4566_bases
ATGAAATCAAAAACAAGTGTCTCACGCTTGTGTTGGTTAACTCTTTTTGCCAGTACCTTTGCCGCCCAAGCGGGTGCGAG
TCAAAAAGAGATCACTACGCAAAAATCAGACAAGTTTCCCTTTGCCGCTGTCGCCGCTAAACATGATGGCGAAACTTGCG
GTACTGACCATAACGGCCAAGATTGGCATCAACTGCAAACAGAGTTCGCACAGCAAATAAGAGCAACAAAGTCGCAGAAA
TCACCAATGATGCGCAGTATGAGCGCAGCATTTCAGACAAACTCCTTAATGGCATCGTCAGGTATTTCATCGTTACAGAC
TAACGCTGTCAGCGCGGTTGAGGGCAGTGTTGCAGTTGAGGGGCGCTACTACATTCCTGTCGTGGTACACATTTATGGTG
AGATGTATAACTGTAGCGATGACAGTGATAAATGTTTGACGGATAGTAAAATCAACGATGCGATCCGCAAGCTCAATGAT
GACTTCCAAGGACTTTCAATCGATGATCCTGAAGTCTCACCACAGTTTGCTGCCATTCGAGAAAACTTAAATATTGAGTT
TGTGCTGGCAAAGAAAGACCCAAATGGTCACAGTACTAACGGTATTGTTCGTTATGATCATGAGCAAGCAGGTTACGGTA
ATGGAGACAGTGAAACCAACGCCAAAATAGCCAGTGATGCATGGGATAACTTTAAATACATGAACTTGTATTTAATGCAT
GACTTACATGACGACAATGTTGGTAATAACTCGGGCATCGCTTGGTATCCTGATGTGTCTATGTCTACCGCTGGCACATC
GCGAGTGGTTTATAACGGACATTACACCGGGCTTAATACCAGTGAGAACTTCCGTTCAGTATTAACCCACGAGTTTGGTC
ATTGGCTGAACCTCATTCATACCTTCGAAACCAAGTCATGTTCGATTACCAATGAGGCATTTTGCGCCACAACCGGTGAT
AAAACCTGTGATACCCCACAGATGTCTTTGCCATCGCAGATGCAAGCAAATGCTAAAAACTGTCTAGGTCAGCCGACCAA
TACAGAAAACTTCATGCACTATACCGACAATTACGCCATGTTCACTCAAGATCAAGTACAGCGTATGACGGCTGCTTTGC
ATGGACCCTCACGGTCAACACTGTGGTCAAATGAGAACCTTATTGCCACAGGCTTAGAGTTACTTACAAGTGACTCTGAG
CGCTATTGGGATGGGATCTCAGGTGTTGATAGTGAGCCAGAAGGAACAGTATTAGAAACGGTTGAGAATATATCAGCGCC
ATTAGATGGTATTGAAACGTTTGAATTCAACTTACCGCATGGTGCGACCAACATTCTGTTCCACCTTGACGGACATACAG
CCGATCCCGATATGTACATATCAAAAGGTGAAGAACCAACTCATGATGGAGCAGGTAATTGGGATGCGGACTATATCTCT
TTTAACTCCCCTGGTTCGACCGAGTCTGTGTCGATAGATATACCCGATTACAACCAACCTTATTACGCATCAATTCATGC
TTTCACTGAATTTGAAAACTCACGTTTAAGAGTTATTCAAGGTAACGATCCTTATCTTGAAGAGGGAGAAAGTCGTTACA
CGCTGTTAAAAGTTGAGAATTTAAAGGCTGACAAAACTGATAATGCTTGGACAGATCGTCCAGGTAAAGTGCATAACTTC
CAGTTTACAGTGCCAGATGATGCTACCCGAACGGTCATCATGGTTCCGGGCGGTTACCATGGTCCAGTTATGGCATCAGG
AGTGCCAAACTTTAACGGCGATTTAGATCTGCACGTAAGCCGTAACCAAGAGGTTTCATTAGAAAATTATGACTGTCGTC
CATTTAGTTGGAAAGGTCTAGCAGAATTTTGTGAGTTTGACGGTGGCGGCACCTACAATGTGATGATCGATCCGTTTGCC
ACTTATACTGACGCGACATTGCATGTGTATTATGAAACAGCAAATACAGGCAATCAGCTGCCTTATGCCAATACTAATGG
CAATAAGTACTTAGAGGCCGTTGGCCATGCCATTGAATTTAGCAGCATAGGTTCGAATGATCCTGATGGTGAAATTGTTA
GCTATGAGTGGGATTTTGGTGATGGTGCCGTTAGCACTGAACAAGAAGTCGCTCATACTTACACAGATACCGGTGAATAC
AATGTGACGCTAACAGTGACTGATAACAGTGGTGAATCCACTACAGCGTCGACGTTGGCGATAATCACCGAGCAATCGCC
AAATGATGCGCCACTTTGCTCAAACTGCGATCGTGTCTACCTTAACGATGAAATAGCCTTATCGTCATTTGAAGGTGATA
CACCGCGTACTTACCAATTTGAAGTGCCAGTGAATGCTTCGCTAGTGACCTTCGAGCTGGTTAATGGTTACAACGGTGAT
CCAGATATTCACGTTAGCCTTAACCAAGCAGTGTCGACTGAAATATACGACTGTCGTCCATGGGAAGCACCTGGACAAAC
TGAGTTATGTCAATTAACGAGTGGCGGTATTGTCAATGTGATGATCGATCCATTCCATGATTATGATTCCGTTAGATTCA
GAGCCTACTACGATATCGATAAAGGCGTGACCCCGATAGAGCCCAACAAGCTGCCAATTGCCAACGCTGGCACTAGCTAC
AATGGTGTAGCGGGTGAAGCCATTAACTTTAATGGCCTACAATCAAGCGATGAAGATGGCAATATTGCCTTATATACTTG
GGACTTTGGCCATGGTGTAACAACCACTGGCGCAACCGTTGACCATGTATACGCCAATGCAGGTACCTATTTTGTCACAC
TCACAGTGACCGATAATGGCGGCGCAGTAAACTCTAGTACAGTTGAAGTCACTATTTTACCAGTAGGTGATATGGACGGT
GACGGTAATGTTGATAGCGATGATATCAACGCACTGCAAGCTGCAATCAGCCAAGGTTCTGCAATTGATGCAAGCTTTGA
TTTGAACAATGACGGTGTCATTAATGGCGCGGACGTTGCGTTAATGAGCGGCATCTGTTCCTTTGACAACTGCAGTAATA
TCGCACCACCGCCACAGGCACCTGTTGCTGTCTCTGCGGCATTGGACAACAACGTCCAGGTGAATACAGACGTAAGATTC
AGCAGTGCAGGTTCTAATGATCAGTACGGTCAGATCGTGACATATGCTTGGGATTTCGGCGATGGAAATAGCAGTAACTG
GGCCGATCCAGTGCATCAATTTGCTGAGCCTGGAATTTATGATGTAACGCTGACACTTACAGATAACGATGGCATGACAG
CAACAAGCACTACCCAGGTGAATATTGACCATGCGCCGCTTACTGATGTTTGTCGCACTGAGCCTGCTGCAAACGAACGA
GACTTGATTGCCTCTGTACCCGTTTGTGTTGGCACTGAAGATAGTTTAACCATTGCGCTGGTTAATCGTCATCAAACGGT
TGCTATCTCTATGGTTAATGCGGCAGATGATGCGCTGATTTACTTCGGCTCAGGTAGCTGGCCGAATATTAATACAGGAG
ACTACAGCGCCGTATCAACTAGCCAAGATGGCCAGCAATGTGCCTTCTATACGATTCCTGATGATGCGAAAAGCTGGGGC
TATATAGAGTTAACTGGGGCCGTTGCAGGTGCAACAATTGTTGTTGACTATGATGTAGCGTCTTGTCGTCCAACAAGCCT
AGTGACTGATGATAGCCTGCAAAATGGCGTTAGTCAGCTAGCTTCAGGTCAGCGTGATGAAGAGGTGCATTTTAGCATGA
ATGTATCTGCTGGAGTATCAGCCTTAACCTTTGCAACAGCAGGTGGCACGGGTGATGCGGATATGTATGTTAAGTTTGGA
TCTCAACCGACAGTCAGTGACTATGATTGCCGCCCTTATAAAGGCGGTAACCTTGAAAGCTGTAACATAGATAATGCTCA
AGCTGGTACCTACCATGTAATGCTACGTGGCTACCAAGACTTTAATGACGTGAGTGTTACTGGGCAGTACGTTGCTGCAG
GTCATAGTAATCAGGCGCCCGTAGCGCAAATTGACGGCCCGTTTGTGAGTAATATTGGTGACAGTATTACCATGAGCAGT
ACCTCAACAGATGTTGACGGCTCAATTGCTAATTACCTATGGGATCTCGGTGATGGCACAACCAGTAATTCAGCTACGGT
AAACCATACGTTTGCTGCAGCTGGGATCTATTCCGTTACGTTAACGGTTACTGATAATGAGGGCTCTACTAGTACAGCCA
CCACTCAAGCAAGCATCTCAGTACTTCAATCAGGCGTTGCGACGTTAGTTTCTGGTACTACAGGTGCTGAAATAGTCTAT
CAAATGCAAGTGCCAGCAGGCGCGAGCAACCTAAGCTTTAGTACTAGCGGTGGCAGTGGTGATGCAGACTTGCATGTGAA
ATTTTCTAGTCAAGCGACCTCATCTGACTTTGACTGTCGTCCTTGGAAAAATGGTAGTAATGAAACCTGCGTTATCGACA
ATGTGCAAGCGGGGACTTATTACATCATGTTGCAGGGTTATAACGACTTTACTGGTGTGCAATTGCTAGGTAATTACAAC
CTTTAA

Upstream 100 bases:

>100_bases
ATTTCAGCATGGAAATGTAATGAATTTATCACAATAAAGTTACAAGCTTATTACTAAAGCAGGAATTTAAAATCACTCAA
CAAATTGAACAGGATAAAGT

Downstream 100 bases:

>100_bases
TGCACGAGTAATATTGTATGACTCATTCAAAGGCCTCGCTTTGGAGGCCTTTTTAATGGGTTAGTTACACTCGCTATTTA
GCCTCTCACTAATTACCTAC

Product: collagenase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1521_residues
MKSKTSVSRLCWLTLFASTFAAQAGASQKEITTQKSDKFPFAAVAAKHDGETCGTDHNGQDWHQLQTEFAQQIRATKSQK
SPMMRSMSAAFQTNSLMASSGISSLQTNAVSAVEGSVAVEGRYYIPVVVHIYGEMYNCSDDSDKCLTDSKINDAIRKLND
DFQGLSIDDPEVSPQFAAIRENLNIEFVLAKKDPNGHSTNGIVRYDHEQAGYGNGDSETNAKIASDAWDNFKYMNLYLMH
DLHDDNVGNNSGIAWYPDVSMSTAGTSRVVYNGHYTGLNTSENFRSVLTHEFGHWLNLIHTFETKSCSITNEAFCATTGD
KTCDTPQMSLPSQMQANAKNCLGQPTNTENFMHYTDNYAMFTQDQVQRMTAALHGPSRSTLWSNENLIATGLELLTSDSE
RYWDGISGVDSEPEGTVLETVENISAPLDGIETFEFNLPHGATNILFHLDGHTADPDMYISKGEEPTHDGAGNWDADYIS
FNSPGSTESVSIDIPDYNQPYYASIHAFTEFENSRLRVIQGNDPYLEEGESRYTLLKVENLKADKTDNAWTDRPGKVHNF
QFTVPDDATRTVIMVPGGYHGPVMASGVPNFNGDLDLHVSRNQEVSLENYDCRPFSWKGLAEFCEFDGGGTYNVMIDPFA
TYTDATLHVYYETANTGNQLPYANTNGNKYLEAVGHAIEFSSIGSNDPDGEIVSYEWDFGDGAVSTEQEVAHTYTDTGEY
NVTLTVTDNSGESTTASTLAIITEQSPNDAPLCSNCDRVYLNDEIALSSFEGDTPRTYQFEVPVNASLVTFELVNGYNGD
PDIHVSLNQAVSTEIYDCRPWEAPGQTELCQLTSGGIVNVMIDPFHDYDSVRFRAYYDIDKGVTPIEPNKLPIANAGTSY
NGVAGEAINFNGLQSSDEDGNIALYTWDFGHGVTTTGATVDHVYANAGTYFVTLTVTDNGGAVNSSTVEVTILPVGDMDG
DGNVDSDDINALQAAISQGSAIDASFDLNNDGVINGADVALMSGICSFDNCSNIAPPPQAPVAVSAALDNNVQVNTDVRF
SSAGSNDQYGQIVTYAWDFGDGNSSNWADPVHQFAEPGIYDVTLTLTDNDGMTATSTTQVNIDHAPLTDVCRTEPAANER
DLIASVPVCVGTEDSLTIALVNRHQTVAISMVNAADDALIYFGSGSWPNINTGDYSAVSTSQDGQQCAFYTIPDDAKSWG
YIELTGAVAGATIVVDYDVASCRPTSLVTDDSLQNGVSQLASGQRDEEVHFSMNVSAGVSALTFATAGGTGDADMYVKFG
SQPTVSDYDCRPYKGGNLESCNIDNAQAGTYHVMLRGYQDFNDVSVTGQYVAAGHSNQAPVAQIDGPFVSNIGDSITMSS
TSTDVDGSIANYLWDLGDGTTSNSATVNHTFAAAGIYSVTLTVTDNEGSTSTATTQASISVLQSGVATLVSGTTGAEIVY
QMQVPAGASNLSFSTSGGSGDADLHVKFSSQATSSDFDCRPWKNGSNETCVIDNVQAGTYYIMLQGYNDFTGVQLLGNYN
L

Sequences:
NA

Specific function: NA

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA