Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212634252

GI number:

Start: 1435120

End: 1439838

Strand: Direct

Name: Not Available

Synonym: swp_1404

Alternate gene names: NA

Gene position: NA

Preceding gene: 212634251

Following gene: 212634253

Centisome position: NA

GC content: NA

Gene sequence:

>4719_bases
ATGGATCATATCTTTATCGGACTAGTACTATTTGGTTTATTTTCTCTACTTATTGGGCTGTTTCTGCAGCTTAAACGCGC
AGTCAATCAAGATATATCTATCTTTTTTAAACTAAGAAAAAACCGTGTATATGCCGCATTATCATTACTGGTTTTTACGC
TTATTTTACAACTTGTTGGTGCGATAGGCTTATCGATTACCTATGACCATGAAGTTAATAAAAGCGGCGAAGCGCTTAGA
ACATTAACCAAAACTAGCGATGTAGCCCTTTACTCTTGGGTCAAAGGTTGGGAATCGCGAATTACAGCTGTTTCGAGCAA
CCCTCTTTTGCAGAAACGGACAGTTGATCTCATTGCTGAATCTAACAACAAAAATGTACTTGTTAGTGAAAACATTCAGT
GGTCAAGAGAAGCTTATCAGCGCTACAGTCAATCTTTTGGGGCTTTAGGTTTTTTTATCACAGCTTTAGATGGTACTAAC
CTGTCTTCTTCAAGAGATGAAAATATCAATACGTTAAATATTGTTGCCCGTAAAGAGGCTAAGATTTTTGCTCGCGCAGT
AGCTGGCGAAACTGTGATTACCGAGCCTATCCGTTCTGAAGTGATGTTGAAAAACCCCTACGGTATTGAGCAAATGCAAA
CACCGACAATGTTTGTGCTGAGCCCTATTCGTGATGCTAAAGAGAACATTTTGGCAGTATTGATGCTGCGTATTGACCCT
TATAAAGAGTTTGCAAAGTTAGCTGAAAGTGCTGGCGTTGGCAAAACAGGAGAGTCTTATTTTGTCTCTCAAGAGGGATA
TATATTGTCTCACAGTCGTTTTGAGAAAGATCTGCAATCATTAGGACTGGTCGCCCCAGGACAGATGTCGGTATTAAACC
TACGGGTAACCGATCCTGGAAGGTTACTTACCCCAGAATCCCCAGCAGCAACAAACCACAACGATAACCCTCTCACATAC
AGTGCTAATCAATTAAGTATGCGCATGGATGGACATAATTATGAGGGTTACAAAGATTATCGCGGAAAGGAGGTTATCGG
CGCTTGGCATTGGGACAGTCGCTATGGCTTTGGTGTTATTACCGAGATGGACCTTGATGAAGCGGCAAGTAATTATTTCT
TCTTTAAAAATATTATCATTGGGATTATGGCGGCGATTGTACTGTTGTGCGTTTTGCTGTCATTAGGCGGGGTAAAGATA
AGTCGCCTCGTACATGATAGGTTGCAAATTGATAATGATAATTTAGAGCGAAAGATTGGCTTGCGAACTAAAGAGCTACA
AGAGCGGGAAGAGGCGCTGTGGGATCTCTATGAAAACTCATTCGTGGCCTATGCTTCGGTTAATGTAGACGGTAATTTTA
TCAAGCACAATCGGCAGTTTTCTTTGTTAGCAGGTGTTAGGCGGGAAGCTTTTAAAAGTGTCAATTGGCGCGATGTAATC
AATAAAGAGAATGATCCAATTGATACTGTATTCAAACAAGGATTACGCGGTATCAGATCGCAAGATGAAAGAGTGCAGCT
GTATGATACCAGCGGCGAGATGATATTTGTTTCAGTATCGACCGATCTTGTAAAGGATGACTCGGGACAAGTCACCGAGG
TTAGGTTTTCATTACTAGATATTAGCGAGCAAGAAAAAGTCCGTTTAGAAATGCTGAAAAACCAACAACAATACCAAGTT
TTACTGGAGAACATTCAGGGTGTTGTATATCGATATCGGGTGGATATTCATGATGAGTTTGAATATACACTGCAGTATTT
GAGCCCAAATGTAGAAGTCGTGACAGGTTATAGCAGTCAAGATTTTCTTGGTGATAATGCCCGACGTACTTTTGTTGATA
TTGTTATCCCCGAAGATAGAAAGGAGCTCAAAGCTGAGTTGAGTATTGCTTATCAAGAGCAGAGCTTTGTTACTCGCGAT
ATTCGCATTAAGAATGCTGCAAAGGAATTAAGATATTTACAGATTAAGGCGCAATTTGTTTACGATGAGATAGGTGATAC
TTACTATTTTGATGGCACATTATTTGATATTACTGAGCAAAAGCTAGCTGAAAATCGACTCCAGCTATCTGAAGATAAGC
TAAAGGTAGCCGCTGAAAGCGCAAGAATGGGAATGTGGGATTATTATCCCACTGAAAATAAAGTGGTGGTTAATACAATG
TACGCCAACATGCTTGGCTATGAGGTGTTGGATCTTTGTATTGAAAATGAGCAGTGGTCAACGCTAAATGCAGGAGAGCA
GACTTGGCTGGAATTAGTGCACCCTGACGACAGAGAAGCTGTGCTCGATACCCTGAAAGCGCAAAGCAAGTCGAATCCAC
AACTGTTAATGCGTGAATTTAGAATGCAGCGAAAAGATGGTGGCTATGATTGGATAATGAGCATAGGGCAGGTACACCAT
TATACTGAAGAGGGGGATGCCGGTCGGATCAGTGGGGTTCACCTCAACATCAATGAGTCGAAAGCGTTGCAAAGGGAGCT
AGCCTCAGCGATTGAAATTGCTGATGATGCTAATCGCGCTAAGGGTGAGTTCTTAGCGAATATGAGTCATGAGATCCACA
CGCCGATGAATGCGATTATTGGTATGACACATCTTGCACTTAAAACCGAGTTGACTAAGCAACAGCACAGCTATATTGAA
AAATCACATCGCTCTGCCCAGTCTCTATTAGGGATCATTAATGACATACTCGACTTTTCAAAAATAGAAGCGGGTAAACT
GGATATTGAAACGATTCAATTCCGCTTAGAGGATGTACTAGAGGATATTATCAACTTTGTTGGTATTAAAGTGGCTGAAA
AAGAGTTGGAATTGTTATTTGATATAGACCCAACAATCCCTGCTATTTTACAAGGCGACCCGCTCCGGTTAGCGCAGATC
CTGACCAATCTTGCTAATAATGCGGTTAAGTTTACCGAACATGGTAGCGTGATCATTGGTGTCAGTATCGAAAAGCTGAC
TGACGATGAGGTAACGCTTAAATTCTCGGTTACAGATACAGGGATAGGGATGACGGCAGAGCAGCAGCAAGGATTGTTTA
AAGCATTTTCTCAAGCCGACGCATCAACCACTAGAAAATATGGTGGTACCGGATTAGGGCTGGCAATTTGTAAGAATTTG
GCTGATTTAATGGGAGGGGAAATTGGTGTTTCAAGTGAAGTGAATAAAGGCAGTATTTTCTACTTTGAGTCGGTATTTCC
CATAGTAGAGCACCATGATTTAGCTCCAATTTATCAAGGCAGTTTAGAAGATGTTCGAGTGTTACTTGTAGAGGATAATG
CCAATTCTCGTGAAATCCTTTTAGCCATGTTAGCCAGCCTTAACGTGCAAGTGGAGTGTGCTGAAGATGGTGTTGAAGCC
GTAGCAATGCTCAAAGCAAGTGAGGCTTCACCTTATCAATTGGCATTGCTTGATTGGAAAATGCCAAAGCTTGATGGAAT
AGGTGTGGCGAAATTTATCAAGCAGTTGCCCGAATCCATAACGCCCCATGTTGTCATGGTGACCGCTTACGGCAAAGAGG
AGTTATTATTAGATGCCGTGGATGTGCCCATTGATGCAGTGCTCACTAAACCTGTTACTCAATCGACTTTATGGGATGCG
TTATTGCCAGCTTTGGGCTTTGCGCCACGCAAACTCACTAGCTTTTCAAAAAGACGCAGTCGAGTTGAAGCTGCGCTATC
TCAACTTGCAGGAGCAAAACTGTTAGTTGCAGAAGACAATGATTTAAATCAGGAGCTCATCGTAGAGCTGCTAAGCAGTA
ATGGTATAACGCCTGTGCTGGCTAATAATGGTCAGGAGGTGCTTGATTTTCTCGAGCAAGAACAGTTCGATGGTGTATTG
ATGGATTGCCAAATGCCAATCATGGATGGCTATACTGCCACTCGCAGGATTAGAGATAATGAACAGTTTGAACACCTTCC
TGTACTGGCTATGACGGAAAATGCAATGGCAGGTGATAGAGAGAGAGCGCTCGAGTCGGGAATGAATGACCATATTCCTA
AACCGATTAATGTTGATGAGTTATTTACTACTATTGCTAAATGGGTGACTCCTAAGCATCCGCAAGTAGCAGAAGTGACG
GACACTTCTGCTAAGGGAAGCGATATTGACTTTAACCTCTTTGAACATATCGATACTCAGTTAGGTTTACATCGTACTCA
AGGAAAAACAGCGCTTTATATAAAGTTACTGCAGAAGTTCGTTCGCGGACAACAAGACTTTTCAACGCAATTTAGTGTGA
GTGCCGAAGCCGATGATACCGTGACATCGGCAAGGCTTATTCATACTTTAAAAAGCGTTGCCGGTGCGATTGGAGCCGTA
AAGCTAGCTGACTATGCTGAGCAATTAGAGCAAGATATTGAAAGCTTTGTACAATCTAAAGCAGATATTACAGCTAGTGC
TAATTATGAATTATTAGAAGGTGAATTATCGCTAGTCTGTAAAGAGATTACCTCGCAATTGCTTAGTGGGATCAATGAGC
AGGCGTTGGTTGGTTTAGATGTTGATAAGGCTAGTGCCGTTTTAACTACACTTATCGATATGCTTAACGACTTTGATATA
GCGGCAACCGAACTTATTACAACAGAGCGAACTGCACTCTCATCTAAGCCACTTGCATCTTTGTTTAAGCAACTTGAAAA
ACAGTTAGATGAATTTGAATTTGATGAGGCACTAAAAGTCGCAATACAGATGCAAGCGATAGTCGCCAAAGACAACTAA

Upstream 100 bases:

>100_bases
TAGAGATTGGAAATTCTTGAAAAAGAGAAATAGCCTTTAAGTCGATATAAGAACAATACAGATAACTTTATTTGTATCAA
TAGTATGGAGTTTATTGGTC

Downstream 100 bases:

>100_bases
TTTTTACGATATAGGAAGGATGTGATGGAACAACAAACCTTACTAGTCGTCGATGACACCCCTGCGAACATAGATGTTTT
GGCTGGAATGTTAAAAGATG

Product: PAS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1572_residues
MDHIFIGLVLFGLFSLLIGLFLQLKRAVNQDISIFFKLRKNRVYAALSLLVFTLILQLVGAIGLSITYDHEVNKSGEALR
TLTKTSDVALYSWVKGWESRITAVSSNPLLQKRTVDLIAESNNKNVLVSENIQWSREAYQRYSQSFGALGFFITALDGTN
LSSSRDENINTLNIVARKEAKIFARAVAGETVITEPIRSEVMLKNPYGIEQMQTPTMFVLSPIRDAKENILAVLMLRIDP
YKEFAKLAESAGVGKTGESYFVSQEGYILSHSRFEKDLQSLGLVAPGQMSVLNLRVTDPGRLLTPESPAATNHNDNPLTY
SANQLSMRMDGHNYEGYKDYRGKEVIGAWHWDSRYGFGVITEMDLDEAASNYFFFKNIIIGIMAAIVLLCVLLSLGGVKI
SRLVHDRLQIDNDNLERKIGLRTKELQEREEALWDLYENSFVAYASVNVDGNFIKHNRQFSLLAGVRREAFKSVNWRDVI
NKENDPIDTVFKQGLRGIRSQDERVQLYDTSGEMIFVSVSTDLVKDDSGQVTEVRFSLLDISEQEKVRLEMLKNQQQYQV
LLENIQGVVYRYRVDIHDEFEYTLQYLSPNVEVVTGYSSQDFLGDNARRTFVDIVIPEDRKELKAELSIAYQEQSFVTRD
IRIKNAAKELRYLQIKAQFVYDEIGDTYYFDGTLFDITEQKLAENRLQLSEDKLKVAAESARMGMWDYYPTENKVVVNTM
YANMLGYEVLDLCIENEQWSTLNAGEQTWLELVHPDDREAVLDTLKAQSKSNPQLLMREFRMQRKDGGYDWIMSIGQVHH
YTEEGDAGRISGVHLNINESKALQRELASAIEIADDANRAKGEFLANMSHEIHTPMNAIIGMTHLALKTELTKQQHSYIE
KSHRSAQSLLGIINDILDFSKIEAGKLDIETIQFRLEDVLEDIINFVGIKVAEKELELLFDIDPTIPAILQGDPLRLAQI
LTNLANNAVKFTEHGSVIIGVSIEKLTDDEVTLKFSVTDTGIGMTAEQQQGLFKAFSQADASTTRKYGGTGLGLAICKNL
ADLMGGEIGVSSEVNKGSIFYFESVFPIVEHHDLAPIYQGSLEDVRVLLVEDNANSREILLAMLASLNVQVECAEDGVEA
VAMLKASEASPYQLALLDWKMPKLDGIGVAKFIKQLPESITPHVVMVTAYGKEELLLDAVDVPIDAVLTKPVTQSTLWDA
LLPALGFAPRKLTSFSKRRSRVEAALSQLAGAKLLVAEDNDLNQELIVELLSSNGITPVLANNGQEVLDFLEQEQFDGVL
MDCQMPIMDGYTATRRIRDNEQFEHLPVLAMTENAMAGDRERALESGMNDHIPKPINVDELFTTIAKWVTPKHPQVAEVT
DTSAKGSDIDFNLFEHIDTQLGLHRTQGKTALYIKLLQKFVRGQQDFSTQFSVSAEADDTVTSARLIHTLKSVAGAIGAV
KLADYAEQLEQDIESFVQSKADITASANYELLEGELSLVCKEITSQLLSGINEQALVGLDVDKASAVLTTLIDMLNDFDI
AATELITTERTALSSKPLASLFKQLEKQLDEFEFDEALKVAIQMQAIVAKDN

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA