| Definition | Shewanella piezotolerans WP3 chromosome, complete genome. |
|---|---|
| Accession | NC_011566 |
| Length | 5,396,476 |
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Identifier: 212634152
GI number:
Start: 1313283
End: 1316405
Strand: Direct
Name: Not Available
Synonym: swp_1301
Alternate gene names: NA
Gene position: NA
Preceding gene: 212634151
Following gene: 212634155
Centisome position: NA
GC content: NA
Gene sequence:
>3123_bases ATGATTAGTCAATTCTTCATCAATAGGCCTAAATTTGCCTTTGTGATCTCTACCGTACTGACCTTGGTTGGGCTTATCTC TATCCCTATCTTGTCGGTGGCTGAGTTCCCTGAAATCGCGCCGCCACAAGTCAGTGTGTCGACCAGCTATTCAGGTGCGA GTGCCGATATTGTAAAAGACACCATTGGCCAACCTTTAGAAGCGGAAGTGAACGGCGTTGAAGGCATGCTGTACATGGAG TCAAAGAGCGCCAATGACGGCAGTTATTCGCTCAACGTGACTTTTGAGGTGGGTACAGACCCTGACATGGCGCAGGTCAA AGTGCAGAACCGGGTGCAACAAGCAATGCCAAGGCTACCTGAAGAGGTAAAAAGGCAGGGCGTAAAAGTTGAAAAGCAAA GCCCAAATATATTGATGGTGGTCAACCTCGTTTCTCCTAACGAAACCTTTGACTCACTGTTTATAACCAACTACGCCGGA CTCAACGTTAAAGATGCGTTAGCACGCCAAAACGGTGTGTCAAAAGTACAGATTATTGGTGCGTTAGATTACGCCATGCG GATCTGGCTTGATCCTGATAAAATGGCCAGCTTTTCGATTACGGCAACCGATGTAATCGGCGCGCTACAAGAGCAAAATA TTCAAGTGGCAGCAGGCCGAATCGGAGCCGCACCGGTTGACCCTGATCAGCAATTTCAATACACCTTGCAAACAAAAGGG CGTTTGAAGAACCCGAAAGAGTTTGCAAACGTTGTTGTAAGAGCTAATGACGATGGTTCGAAAGTCATTGTTGGCGATGT GGCACGGGTAGAGCTTGGCTCGCAAACCTATGACGCTCAAGGTAAGCTCAATAACAAGCCTTCGGCGATTATCTCTATCT ATCAATCACCTGATGCCAATGCGCTAGACGTGGCAAAAGGTATTCGTGCGCAGATGGAAGCCTTGTCGGCAAACTTCCCC AAAGATTTAGAATATGAAGTGCTCTACGACACCACTGAATTTGTTGAAACCTCCATTAAAGAAGTGGTGCAAACGCTGTT TATCTCCGTTGCCTTGGTGATTTTTGTAGTGTTTATCTTCCTGCAAGATGTGCGCTCTACCCTTATTCCCGGCATCGCGA TTCCGGTCTCTTTGATTGGTACCTTTGCCTTCTTGCTGCTGTCAGGGATGAGCATCAATACAGTCTCGCTATTCGCACTT ATCTTAGCCATTGGTATTGTGGTTGATGATGCCATTGTGGTGGTCGAGAACGTTACACGTCTAATGCAAGATGAGGGTTT ATCACCTAAAGAAGCGACCTCTAAAGCGATGCAAGAGGTTACCGGGCCGATTATTGCGACCACATTGGTGTTGCTTGCTG TATTTGCCCCTACAGCTGTGATGCCTGGGATCACTGGCCAGATGTATGCGCAGTTCTCTGTGACCATCTGTATCTCAGTG CTTATCTCATCGGTTAATGCATTAACCTTAAGCCCAGCATTATGCGCCTCAGTATTGCGACCACCTAAAGAGCATACTCA AGGTTTTCATGCCAAATTCAACAAGCACTTTAATGTCTTTACTGGCAAATACACCAAGTTAGTCCATGTGCTTACTCGCA AGTTAACGCTAGTGCTGGTGGTATTTATTGCCCTGCTAGCAGCAACGGGAGGCTTAGCTAAAATCTTGCCATCGGGTTTT GTGCCTATGGAAGATAAAAAGGCCTTTATGGTGGATATTCAACTTCCTGATGGCGCGTCATTAAACCGTACGGAAGATGT GATGCGTGATTTGGTTGAGCTAACTTTAGCTGAACCGGGCGTTGAAAATGTCATTCATGCCAGTGGCTTTAGTATCCTAA CAGGCTCAGTTGCATCAAACGGAGGTTTAATGATTGTGACCCTGTCGACTTGGTCTGAACGTGATACGCCAGATATGGCA GAACATGCGATTGTGGCAAAGCTGCAGGCCAAATACGCTGCTAATCCGTCTGTGAAAGCGATGGCATTCTCGTTGCCGCC TATTCCTGGCGTCGGTAGTGTGGGTGGCTTTGAATTTGTATTACAAGACACCCAGGGGCGTAGTCCGCAGGAGTTAGCAT CTGTGATGCGCGCGCTCATTATGAAAGCCAATGAGCAGCCAGAAATTGCCATGTCCTTTAGTAATTTCCGCGCCGATGTA CCGCAGATGTTTGTAGATGTTGACCGTGACAAAGCGAAGGCACTGGGCATACCACTGAACGAGATCTTCACCACTATGCA GACCATGCTGGGTTCGATGTATGTCAATGACTTCAACCGCTTTGGTAAGGTCTTCAGAGTCATCTTGCAAGCTGAAGCTG ATTTCCGTAACTCCGATATGGATATTGCCCGTTTCTACGTGCGCTCCTCGACGGGGGAGATGGTACCACTGAGTACCTTG GTGACCGTGACACCGATCCTCGGGCCTGACGTGATGAACTCATACAACATGTTTAGCTCTACCACGATTAACGGCTTCCC TGCGCCAGGTTTTAGCTCTGGTGACGCTATTAAGGCGATGGAACGTGCTGCAGCGCAAACATTGCCAACGGGTTACAGTT ACGAGTGGACAGGGCAAACTTACCAAGAGATTAAAGCGGGTAACTTAGCGCCATTAATCTTCGCGTTAGCATTGGTATTT ACCTACCTATTCTTGGTGGCACAATACGAGAGTTGGACCATTCCGTTTGCGGTTATGTTGGCGGTTCCGATTGCGATACT GGGGGCGTTCCTCAATATCTGGCTGGTGGGCGCAGAGCTAAACCTATACGCGCAGATTGGATTGGTGCTATTGATAGGAC TCGCCTGTAAGAATGCAATCTTGATTGTAGAGTTTGCTAAGCAATTAAGGGAAGAGGGCAAAAGTATTCTTGATGCGGGT GAGACGGCTGCAAGATTACGTTTCCGTGCGGTATTAATGACCGCCTTCTCATTCCTACTCGGGGTATTACCGCTGGTGGT AGCCACAGGTGCGGGGGCAGGTAGTCGCCGAGCACTGGGTTACTCGGTATTTGGCGGTATGTTAGCTGCAACAATAGTAG GAACACTGTTAGTACCGGTTTTCTACGTGATGATGCAAACCCTACGTGAGAAGTTCAAAGGTGAGGCTAAGGTAGAAAGC TAG
Upstream 100 bases:
>100_bases CGACGGCCTGCAAAAGATCAGACCAGGTATTGAAGTGAACGCTGTGGAGCAAGAAATTGTTCCTTTTCAAGAAGCTAACC AAACTAAGTAGGGGATTGCT
Downstream 100 bases:
>100_bases CCTTAACAGAGGGCATTTCAAATTAGCTAACATTAAGGCCTGCAAAATTGTAGGCCTTTTTATTACTCTTGAGGGGAACA AAGGCTGTTGCGCCTGAGTC
Product: multidrug efflux membrane fusion protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1040_residues MISQFFINRPKFAFVISTVLTLVGLISIPILSVAEFPEIAPPQVSVSTSYSGASADIVKDTIGQPLEAEVNGVEGMLYME SKSANDGSYSLNVTFEVGTDPDMAQVKVQNRVQQAMPRLPEEVKRQGVKVEKQSPNILMVVNLVSPNETFDSLFITNYAG LNVKDALARQNGVSKVQIIGALDYAMRIWLDPDKMASFSITATDVIGALQEQNIQVAAGRIGAAPVDPDQQFQYTLQTKG RLKNPKEFANVVVRANDDGSKVIVGDVARVELGSQTYDAQGKLNNKPSAIISIYQSPDANALDVAKGIRAQMEALSANFP KDLEYEVLYDTTEFVETSIKEVVQTLFISVALVIFVVFIFLQDVRSTLIPGIAIPVSLIGTFAFLLLSGMSINTVSLFAL ILAIGIVVDDAIVVVENVTRLMQDEGLSPKEATSKAMQEVTGPIIATTLVLLAVFAPTAVMPGITGQMYAQFSVTICISV LISSVNALTLSPALCASVLRPPKEHTQGFHAKFNKHFNVFTGKYTKLVHVLTRKLTLVLVVFIALLAATGGLAKILPSGF VPMEDKKAFMVDIQLPDGASLNRTEDVMRDLVELTLAEPGVENVIHASGFSILTGSVASNGGLMIVTLSTWSERDTPDMA EHAIVAKLQAKYAANPSVKAMAFSLPPIPGVGSVGGFEFVLQDTQGRSPQELASVMRALIMKANEQPEIAMSFSNFRADV PQMFVDVDRDKAKALGIPLNEIFTTMQTMLGSMYVNDFNRFGKVFRVILQAEADFRNSDMDIARFYVRSSTGEMVPLSTL VTVTPILGPDVMNSYNMFSSTTINGFPAPGFSSGDAIKAMERAAAQTLPTGYSYEWTGQTYQEIKAGNLAPLIFALALVF TYLFLVAQYESWTIPFAVMLAVPIAILGAFLNIWLVGAELNLYAQIGLVLLIGLACKNAILIVEFAKQLREEGKSILDAG ETAARLRFRAVLMTAFSFLLGVLPLVVATGAGAGSRRALGYSVFGGMLAATIVGTLLVPVFYVMMQTLREKFKGEAKVES
Sequences:
NA
Specific function: NA
COG id: COG0841
COG function: function code V; Cation/multidrug efflux pump
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA