Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212633794

GI number:

Start: 927663

End: 929789

Strand: Direct

Name: Not Available

Synonym: swp_0926

Alternate gene names: NA

Gene position: NA

Preceding gene: 212633792

Following gene: 212633795

Centisome position: NA

GC content: NA

Gene sequence:

>2127_bases
ATGTTTAAATTAAAATACCCAGGGTTGCTGCTCGCGATGTCCCTTACTGCTCTACCTACTTGGGCTGAAGATCAAGTACA
GAAAAAAGCGGCTGATGATAGTGAAATGGAAGTGATTACTATCAGTGGTAAAGGGCTGATTTCATACGTCAGTGCTTCTG
CTGCTAAAACTGATATGCCGATTATTGAGACGCCATCTTCAATTTCAGTATTAACGGAAAAGCGTATTACTGACTTGGGT
GCAGAAAATGTACAAGACGCCATTGGATACGTGGCTGGGGTTTATAATGGCCCCTATGGCGTCGATACTCGAGGTGATTG
GGCGCAAATACGAGGTGTGTCACCGCTGCAATACCAAGATGGGTTGCAGATGATGTTTGGCAATTACAATAATGTGCGTA
CCAATCCATATATGTTGCAGCAGATAGAGATCCTAAAAGGTCCATCATCGGTACTCTATGGCCAAGGTTCAACGGGCGGT
ATTATTAACTTAGTGACTAAACGTCCGCAAGCAGAGCAAAAAGGGGAGATTTGGGCGCAAGTAGGTAGCTATGATCGTAA
GCAGTTAGCTGCAGACGTGACGGGAGCTTTGGATGATGATGAAACCTTTTTGTATCGCTTAACCGGCCTATATCGTGACA
GTGACACTCAAACTGATCACGTAGAAGATAATAGTTACTTTATTGCGCCTGCTCTGAGCTGGTTTGCGACTGACAGTACC
AAAATCACTGCACTAGCCAATCTACAAAAAAATGAGTCCGGTTCTAGTACCCAGTTCTTCCCACATGTTGGTACGATATT
GCCTGCTCCTAATGGCCAGATCCCAAGTGAACGTTTTGTTAGTGAGCCTGGCTTTGATCAATATGACACTGAACAGCGTG
CAGTGACATTAATGGTTGATCAAGACCTGAATGACTACATGTCTATTCACTGGGCAACTCGTTATGTTGATAGCGAATCA
ACGTACCGGACTATGTACGCTTGGCCGTTTGCATTACAGGCGGATGATCGCTCATTGCTACGCTCTATTTCTATGAGTGA
TGCAACTGCAGAGGCGTATACCTCAGATCTGCGTCTACAAGCACAGTTTGATACTGGCGATGTTGAGCATAACCTAACGT
TTGGAATCGACTATCAAGATGTTGAAATTGATACTGATCGACTGTTTGTCTGGAACGGCGGTGGTTTGATTGATATCTAT
AACCCCAAATATGGCGTCAATCCTGAAAGTTATCCTACAAGTGCAGATATTCCAGATACCCCTGCTGAAAACAGCAAGCA
ACTTGGGGTTTACCTGCAAGACTCTATTAAATTTGGTGGCTGGGTGATCAGTGGTGCGCTGCGTCATGACAAAGTTGAAT
CTGAAACGGCTGTAGTTGGCACGCAAGACCAAAGTGCCACTACCGGTCGACTCGGAGTACTTTATAGCTTTGATTCCGGC
ATAGCACCTTATGTGAGTTATTCGCAGTCTTTCTTGCCTATTTATGGTTCTAATGAAGTGGGTACGCCATTTAAACCACA
AGAAGGTGAGCAATATGAGATTGGTGTTAAATACCAGCCGAGTGGCACTGAACATCTGTTTACCGCATCTATTTACGATA
TTACCGACAAAAACCGTAAACAATCAGCAGGTCCAGATTTAACCTTGCAGCTTGGGGAAGTCGAGATCCAAGGCTTGGAG
CTAGAAGCGCAGTTAGAGTGGGATGAGATTGACGTTTATGCCAGCTACGCCTATACCGACTCAACTAAGCACTCATCGAC
CACTGGTGAAGATGGTGCCAAACTTGCTGCTATGCCGGATAATATGTTGTCGACCTGGGTGACTTACCGCCCACAGTCAT
TCTGGCAGGGTTTCAAGGCGGGTGTTGGTTACCGCTTTGTAGGCGAAACTTCTGATGGCAGCATTGACGTGGTATTGCCA
GATGGCACCGTTGCACATAAAGCGCTTGCAACCGATAGTTACCACCTGTTTGATATGATGATTGGTTATGAATTTGACCA
GTTCGATATTAGCGTCAATGTTGACAATCTTACTGATGATACAGTGATTACCAGTTGTTTAGCTCGCGGTGATTGTTTCT
ATGGGCAGCGCCGTACTATCAACGCGAATGTGAAGTATCGCTTCTAA

Upstream 100 bases:

>100_bases
AAATTTTGTTGAGATTAATTATCATTTTCATTAAGATCTCGGCCTTTTTAGCGTATTTAGATTTCTGCTTGTATTAACAA
TGAGGCTGAAGATTGACCAA

Downstream 100 bases:

>100_bases
GTGTTATGTAGTGTGATTTAGTCACTTAAATCAAAAGCCATAGCAACCGCTATGGCTTTTTTTATGCAAATTAACCCATC
ATTAATTTAGTTATCTCCGA

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>708_residues
MFKLKYPGLLLAMSLTALPTWAEDQVQKKAADDSEMEVITISGKGLISYVSASAAKTDMPIIETPSSISVLTEKRITDLG
AENVQDAIGYVAGVYNGPYGVDTRGDWAQIRGVSPLQYQDGLQMMFGNYNNVRTNPYMLQQIEILKGPSSVLYGQGSTGG
IINLVTKRPQAEQKGEIWAQVGSYDRKQLAADVTGALDDDETFLYRLTGLYRDSDTQTDHVEDNSYFIAPALSWFATDST
KITALANLQKNESGSSTQFFPHVGTILPAPNGQIPSERFVSEPGFDQYDTEQRAVTLMVDQDLNDYMSIHWATRYVDSES
TYRTMYAWPFALQADDRSLLRSISMSDATAEAYTSDLRLQAQFDTGDVEHNLTFGIDYQDVEIDTDRLFVWNGGGLIDIY
NPKYGVNPESYPTSADIPDTPAENSKQLGVYLQDSIKFGGWVISGALRHDKVESETAVVGTQDQSATTGRLGVLYSFDSG
IAPYVSYSQSFLPIYGSNEVGTPFKPQEGEQYEIGVKYQPSGTEHLFTASIYDITDKNRKQSAGPDLTLQLGEVEIQGLE
LEAQLEWDEIDVYASYAYTDSTKHSSTTGEDGAKLAAMPDNMLSTWVTYRPQSFWQGFKAGVGYRFVGETSDGSIDVVLP
DGTVAHKALATDSYHLFDMMIGYEFDQFDISVNVDNLTDDTVITSCLARGDCFYGQRRTINANVKYRF

Sequences:
NA

Specific function: NA

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA