Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 212633401

GI number:

Start: 529246

End: 533367

Strand: Direct

Name: Not Available

Synonym: swp_0511

Alternate gene names: NA

Gene position: NA

Preceding gene: 212633400

Following gene: 212633402

Centisome position: NA

GC content: NA

Gene sequence:

>4122_bases
GTGCTTTTTGCGCTAGTCGTTAGCTTGTTTCGAGGTTTGCTGCCGCAACTTGATCAAGTTCGATTAGAGCTGGTCGATTA
CATCTATGAGCAGTATCAAGTCGAGGTTCAGGTCGGCAAATTGCAGGCTGAGTGGCAAGCGTTTGGCCCTGCATTAACCG
TCAAGAACTTTGTATTGCCCTCACAAGAGAATCTCCCGGTTACACTGCTCTTTGAGCAAGTCCACTTTAAATTTGATTTC
TGGCAAAGCCTGCTAACAGCAACACCGCAGATTGAAGATGTCATTTTTGATGGTGCCCATGTGGCGGTCGATCTAGATCG
ATTAGCATCCACATCGACCTCATCAGATACAAAGATGGAAACTGACTGGATTTATCAGCTGATGCTGGAACAGTTAGATC
GTTTCTCAATTGCCAATGCTCGCCTTCAATTATTGAGCAGTAAACATCAGTATCGACCTATTTTTATTAAAGATATGAAG
TGGCGTAATTCTGCCCAGCGCCATCGTGGTCAAGGTAAATTGTTTTTGGATGAGCAAGCATCCGAGGTTGAACTGCTGTC
TTTAAGTGTTGATATCAAGGGCGATGGCTATAAACCAGAATCTTTAGCCGGTCAGTTTTATCTTGCTGCTGAATCGCTTG
ATATCGGTGAGTGGGCATCACGCCAGCCAGATCCTTTTGATGCGGATAAGAAATTGCAGCTCGAAGGTGTGGTTAATCTA
GAGGCGTGGATTAGCTTTGCCAACAGAGAGATACAGGATGCGACCGTAGCATTTCAGCCTAGCTGGTTGGAATGGTTCTT
AAATGACGAAGCGCAAAAGTTTGAAATTAAATCGGGCGCTATGCGCTGGCAGCCTAATGAGAGTGGCTGGCAGGTTAGCA
GTCATGCTCTTACGTTTGCGACTAATGGCGAGCATTGGCCGTTGCCTATACTCAGTGCTAAGCAAGATGGCGATAGTATC
GACGCTTATTTAAGCCAGTTAGATCTCGCCACTATATTGCCTTTATTGCCACTTATTCCTGGGGTTGATTTGGCCGCCTT
AGATACTTGGCAATCTTTAGATCCCAAAGGGGAAATAGACAACGCTCACTTTCAGTGGGCTCGAGCAAACCAGCCTCCTA
ATTTGTCGGCTGATATTCATGGTGTTAGTTGGCAAGCGCATGATGGGATCCCTGGTCTTAGTCCTATTGATGCCAAGTTG
GTGGTAACGGGTGAGTCACTCAGTTTTCTATTGCCTAAGCAGCAGTACATTGTCGACTTTGATGATGGTTTTGAGGCTCC
TTTAGCGTTAGATGGCGAAGCATTCTCTGGTCTGTTTGATTTCCAAACTTCGGCACTAACCTTACCCAAAGTACATTTTA
GTAACGCCGATATTTCACTTGATGCCTCAACTCGACTAGAATTTTCTGATGCCGCTCACATGGCGTTGTTAGCTGAACTT
AAGATCAATGATGTTGCCAATGCACATCGCTACTTTCCACTAAAAGGGATGAGTGATGGCTTAGTGACTTATTTAACAGG
GGCGTTGAAGGCTGGTAAAACTGACGATGCCGTGATTGTGTGGCATGGCGCTTTTAAAGATTACCCTTATGCGCAAAGCG
CTGGTATTTTCCAAGCAGGCTTTACACTCGATAAAGCCAATTTTGAGTTCCAACAGACTTGGCCAGCTGTCTCTGATCTC
AATCTGTCTGCGCTGTTTGAGAATGCAGCGATGGATTTGTGGGTCAATAAAGGTCAATTGATGGATGTGTCTGCCGCGGG
TGCCTATATTGGTATTCCCTCTATGAGCCATGAAAGTCTGCTGGTGGTAAAAGCCGATTTAGCTACTAAGGCTGCAGCTG
CTAACGCTGTTATTCAACAGTCTCCTTTAAAAAGCTCCGTGGGTTCAACCCTTGATGTGGTGCAGATTAATGGTGACATT
ACCGGTGAACTTGATCTTAGTATTCCGTTATATGATGGCGCAGATGCTGTCATTAAGGGCACGGTAGATTTTGATAAAAC
ACCTGTTTTCATTAGTGAGCCTGGTATCGCGCTGGAAAGTGTCACAGGGCAAGTGCAGTTCACCAATGATGTGGTGACAG
GTAGCGACATTAGTGCCTTGATGTACGGACAACCGTTACAGTTTAGTTTTGATACGGGTAACGTAAATAAAAACTATGCG
GTTAATGTTGATCTAGCAGGTCAGTGGCAGCTGGCCAATTTGCCCGTTGAGCTTAATAATCCATTGAGTGATTACTATAA
GGGCAATGTCGATTGGTCTGGCGGTTTGATGCTTATTTTTGACCCCACTGGCTATCGAATTCAAGCAAGAGTGGACAGTG
ACCTCATTGGCACTGAGTTTGATTTACCAGCTCCATTTGCTAAGTCATCCGAGCAAGCTGCAGCGTTTACAGCCGAGCTT
ATCGGTGATAATAAACAGTCATCTTTAGGGATTAAGCTCAATAAGCAATTAGAGTTTTGGGGAGGCTTTGATGTTGAATC
TGGTAACGGCTTGGCTCATTTTGATCTGCTCCTCGGCCGTTTATTTAAACCTGGTGATCAACTGCGTAAGAAACAGGGGC
ATTTACAGATAGAACTCGATAAAACAGAGTTCTCACCATGGTTACCGATTATTCAGGGGTTCACGGCTAAATCAGAGTTA
GCTACTGACACTACCGTTACTTCTAAGAGCTTTTTCCCACCATTGGTGTCAATTGATGCGAACTTTAATGAACTTGATTT
GATGGGGCAAGCGCTCAATGAACTGCATTTTAGCGCTGCACCAACAGAACATTCTTGGCGCTTTGATGCTACATCGGAGC
AGTTTGATGGCAGGATTGATTTTTACCCTGATTGGGTTAAGCAGGGTCTTAAAATTGTGTCCAGTAAACTATATCTGTCG
CCAGAAGCTAAACCAGATGAAACCGCGCATTATAAATCCGATACCGTGTTAGCAAATCTGCCGCCCTTGGCTGTTGATGT
CGATGACTTTAGGATGTTTGATCGCCCTATGGGGCACCTAGTATTGCAAGCTACACCTAAAGAGAATACTTATAATATTC
AAACCTTGTCTATGACAACTGATGAGGTGAGCCTTAGAGGTAATGGCACTTGGTCTATCTTGGATGGTGAAAGCTTAACG
TCATTTAGTTTAACACTGGATGCGACAAAATTTGATCACCTTTCAAAGCAACTTGGTTTTGATCCAGGTTTGAAAGATGC
ACCGACTGCGGTGACCGGAGAGATCTCTTGGAGCGGCGCGCCTTATGCATTTTCGCTAGAGACATTAAACGGACAAATCG
GCTTTGAACTTGGTAAAGGACATCTATCTGAGGTCAGTGATAAAGGCGCACGGATATTCTCGTTATTTAGCCTTGACTCA
TTACTGCGTAAATTGTCTCTCGATTTTTCTGATGTATTTGGCAAAGGGTTATATTTTGACTCATTTACGGGGACATTGAA
GTTGGATAACGGGGTGGTAAAAACCACCGATACCGAAATGAAAGCGGTCGCCGGTAATATGCGGGTACGCGGCTATACCA
ATTTAATGAGCGAGAGCTTGAACTACGACATTCGTTTTGTGCCTAAACTTGCCTCTAGCGTGCCAACCGTTGTGCTACTT
AGTACCGGTGGTTGGACATTAGGTCTTGGCGCTTTTGCACTAACGAAAGTATTGGAACCAGTCATTGAGGTTATCTCCGA
GATCCGCTTTAGGTTAACCGGCACCATGTCTGAGCCTAAACTTGAAGAGCTATCGCGTAAGAGTAAAGAGATTGAAATTC
CTGAGTCTGTATTGCCTAAAAAGGCTATAGAGCCAACGAGCAAAGCTGGGGAGCAGGGCGGCATTATTGAGCCTACTTCG
AGCCCTACAGAGTTAAGCTCCGAAGTGGAGAGCAGTCAAAGTCCTCCATCAGAGCTGAATGAACAAATTGCCGTGGAAGC
TGCCGCGAGCCCACAAGCTGAAGGCGTTCCAACACAACCAAATCCAGCTGAGAAAGCGGCTGAGCAATCCAACTTTGAGC
CAGTTAGTGGGCAACCCACTTTGAAGTTGATACAGGGAGAGTCTGATGCAAGTGAACCTACTGCAATGTCAAAGCAGTCG
CAGCGTAACCGAGAATCTAGCATTCATCGAGTCGCAGCTTAA

Upstream 100 bases:

>100_bases
ACGCTCAGAATAAATTTGATGTGGTGATAATGTAGTGCCACCCAAGTCGGTTAAATTTAATTTTCCAAGAGTTTGTCTAC
AGTCTCTAGCTATTGTGCTG

Downstream 100 bases:

>100_bases
ACAGCTAACGCGTCACATTGAAAGCAAGCAGCTGGTGGTTCTACCTGAGTGCTGCTTGCTGTTTGGTGGGCGAGAGAGCC
AACAGCTAGAATATGCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1373_residues
MLFALVVSLFRGLLPQLDQVRLELVDYIYEQYQVEVQVGKLQAEWQAFGPALTVKNFVLPSQENLPVTLLFEQVHFKFDF
WQSLLTATPQIEDVIFDGAHVAVDLDRLASTSTSSDTKMETDWIYQLMLEQLDRFSIANARLQLLSSKHQYRPIFIKDMK
WRNSAQRHRGQGKLFLDEQASEVELLSLSVDIKGDGYKPESLAGQFYLAAESLDIGEWASRQPDPFDADKKLQLEGVVNL
EAWISFANREIQDATVAFQPSWLEWFLNDEAQKFEIKSGAMRWQPNESGWQVSSHALTFATNGEHWPLPILSAKQDGDSI
DAYLSQLDLATILPLLPLIPGVDLAALDTWQSLDPKGEIDNAHFQWARANQPPNLSADIHGVSWQAHDGIPGLSPIDAKL
VVTGESLSFLLPKQQYIVDFDDGFEAPLALDGEAFSGLFDFQTSALTLPKVHFSNADISLDASTRLEFSDAAHMALLAEL
KINDVANAHRYFPLKGMSDGLVTYLTGALKAGKTDDAVIVWHGAFKDYPYAQSAGIFQAGFTLDKANFEFQQTWPAVSDL
NLSALFENAAMDLWVNKGQLMDVSAAGAYIGIPSMSHESLLVVKADLATKAAAANAVIQQSPLKSSVGSTLDVVQINGDI
TGELDLSIPLYDGADAVIKGTVDFDKTPVFISEPGIALESVTGQVQFTNDVVTGSDISALMYGQPLQFSFDTGNVNKNYA
VNVDLAGQWQLANLPVELNNPLSDYYKGNVDWSGGLMLIFDPTGYRIQARVDSDLIGTEFDLPAPFAKSSEQAAAFTAEL
IGDNKQSSLGIKLNKQLEFWGGFDVESGNGLAHFDLLLGRLFKPGDQLRKKQGHLQIELDKTEFSPWLPIIQGFTAKSEL
ATDTTVTSKSFFPPLVSIDANFNELDLMGQALNELHFSAAPTEHSWRFDATSEQFDGRIDFYPDWVKQGLKIVSSKLYLS
PEAKPDETAHYKSDTVLANLPPLAVDVDDFRMFDRPMGHLVLQATPKENTYNIQTLSMTTDEVSLRGNGTWSILDGESLT
SFSLTLDATKFDHLSKQLGFDPGLKDAPTAVTGEISWSGAPYAFSLETLNGQIGFELGKGHLSEVSDKGARIFSLFSLDS
LLRKLSLDFSDVFGKGLYFDSFTGTLKLDNGVVKTTDTEMKAVAGNMRVRGYTNLMSESLNYDIRFVPKLASSVPTVVLL
STGGWTLGLGAFALTKVLEPVIEVISEIRFRLTGTMSEPKLEELSRKSKEIEIPESVLPKKAIEPTSKAGEQGGIIEPTS
SPTELSSEVESSQSPPSELNEQIAVEAAASPQAEGVPTQPNPAEKAAEQSNFEPVSGQPTLKLIQGESDASEPTAMSKQS
QRNRESSIHRVAA

Sequences:
NA

Specific function: NA

COG id: COG3164

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA