Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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The map label for this gene is Not Available

Identifier: 212633381

GI number:

Start: 507922

End: 509598

Strand: Direct

Name: Not Available

Synonym: swp_0488

Alternate gene names: NA

Gene position: NA

Preceding gene: 212633380

Following gene: 212633382

Centisome position: NA

GC content: NA

Gene sequence:

>1677_bases
ATGCGCTCAATATACTACATAACCCCTTTAATGACTTTGCTGCTGGTGGCCTGTCAGACTGTTGACCGACCGAACCCTGT
TGAGTCAAAACAGGCGATAGCAGAGTCTTTGGCGACCGCAGAAAGTGCCGCCTTAGCACCGCCTCCAGCGGTATTGCCTG
ACGAAGTGCAACGAGAGCTAGCTTCAAATAGCTTGCTGGCTGGTTTTGCTCCGGCTAAAAGAACTGAACGTCGATTTGAT
GTGTCGGCCCATGATGTTGAGGCTAAGGTTTTCTTCCCGAGTTTAGTGCAAGGTACGCCACTAAGTGTTGCTGTGCATCC
CGATGTGTCTGGACAAATATCGCTTTCTTTAAAAGGCGTAACACTTAACGAAGCTTTGCAAGTCGTTGAAGATATTTATG
GTTACGAAGTTAGCCGGGAAAACCGCATTTTACGGATCTATCCTGCGGGAATGCGTACTGAAACCTTCTCTCTCAATTAC
TTATATATGGAGCGCCAAGGCCTATCGTTAACGTCAGTTAATTCTGGACGCATCTCAGACAATAACAATAGCTCAAGTGG
CAGTAATAATAGCAACAATAACGGTAACAGTAATAACTCGAATAGCAACTCTAACAGTGATTCAAGTTCAAACAGTGAAA
GTAGTGAGCAAACTAACGGTACCTTTATCCGTTCTAAGACTAAATCTGATTTTTGGGGCGAGCTAAAAGAAACACTTGTC
TCAATCGTTGGTGATAGCGGTGGTGGTCGTCAAGTGGTGGTTACTCCCCAAGCAGGGCTCGTGACTATTCGCGCTTATCC
AAATGAGATAAGACAGGTGCGTAACTTCATAAAAACCGCTGAGAGTCATTTACAGCGCCAAGTTATTTTGGAAGCGAAAG
TACTAGAAGTCACGCTTTCAGACGGATATCAGCAAGGAATTCATTGGGAGAGCGTATTAGGTCATGCTGGTAGCACTGAC
ATTACGTTTGGTACCAGTCCAACCACAGGCTTAAGTGACCAAATCACTAGCGTATTAGGTGGCGTAACTTCTATCCAGCT
TAAAGGTTCAGACTTTAGTACCATGATTAGCTTGCTTGATACGCAGGGTGACGTCGATGTACTGTCTAGCCCACGAGTTA
CAGCCTCGAATAACCAAAAAGCCGTAATTAAAGTCGGTACTGATGAGTATTTCGTTACTGATGTCTCTTCAACGACAGTT
GCAGGCACTACGCCTGTGACTACGCCTGAGGTTGAGCTCACCCCATTTTTCTCTGGTATTGCACTTGATGTAACCCCGCA
AATTGATGCCGAAGGTAATGTGTTGTTGCACATCCACCCATCAGTGATTGATATCAAAGAGCAGACAAAAACCATTAAAA
TCTCAGATAGCACCTTAGAGCTGCCATTAGCACAGAGCGAAATTCGCGAATCAGATACTGTGATTAAAGCTGCAAGTGGC
GACGTTGTTGTGATTGGTGGCTTGATGAAGAGCGAAAATATTGAGTTGGTGTCAAAGGTGCCGCTGTTGGGCGATATTCC
ATATTTAGGTGAGGCATTTACTAACCGAGCCAATTCTACCGTTAAAACAGAGCTAGTTATCTTGCTTAAACCTGTGGTTG
TTGGTGCCGACACTTGGGAGACTGAGCTTAAGCGCTCTCAAGAGCTGCTTGACCGTTGGTATCCTGAGGAGGAATAG

Upstream 100 bases:

>100_bases
GTTAAAATTGTGCAGATTGGCAAGGATACTGTGTCGTTAGCGGATGGCCGTAAATTGACAATATTTAAAGCGATTACAGA
GATTAAGGGACAATAACCAG

Downstream 100 bases:

>100_bases
GCTTGTATCTGCAGCACTTTCGGTTAACTGAAACGCCATTTTCATTGACGCCGAATACGGAATTTTTCTTCGGTTTAGCA
CCGCATGTGGAAGCCTTACA

Product: type II and III secretion system protein:secretin

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>558_residues
MRSIYYITPLMTLLLVACQTVDRPNPVESKQAIAESLATAESAALAPPPAVLPDEVQRELASNSLLAGFAPAKRTERRFD
VSAHDVEAKVFFPSLVQGTPLSVAVHPDVSGQISLSLKGVTLNEALQVVEDIYGYEVSRENRILRIYPAGMRTETFSLNY
LYMERQGLSLTSVNSGRISDNNNSSSGSNNSNNNGNSNNSNSNSNSDSSSNSESSEQTNGTFIRSKTKSDFWGELKETLV
SIVGDSGGGRQVVVTPQAGLVTIRAYPNEIRQVRNFIKTAESHLQRQVILEAKVLEVTLSDGYQQGIHWESVLGHAGSTD
ITFGTSPTTGLSDQITSVLGGVTSIQLKGSDFSTMISLLDTQGDVDVLSSPRVTASNNQKAVIKVGTDEYFVTDVSSTTV
AGTTPVTTPEVELTPFFSGIALDVTPQIDAEGNVLLHIHPSVIDIKEQTKTIKISDSTLELPLAQSEIRESDTVIKAASG
DVVVIGGLMKSENIELVSKVPLLGDIPYLGEAFTNRANSTVKTELVILLKPVVVGADTWETELKRSQELLDRWYPEEE

Sequences:
NA

Specific function: NA

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA