| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is dglA [H]
Identifier: 212225117
GI number: 212225117
Start: 1844495
End: 1844797
Strand: Reverse
Name: dglA [H]
Synonym: TON_1964
Alternate gene names: 212225117
Gene position: 1844797-1844495 (Counterclockwise)
Preceding gene: 212225119
Following gene: 212225116
Centisome position: 99.85
GC content: 51.16
Gene sequence:
>303_bases ATGGTCATAGTGGAGTTTGTCATAGTCCCCCTCGGCGAGAAGAGCCTGAGCCGGTACGTAGCAGAGGTAGTAAAGCTTTT AGAGAAAAAGGGTGTTAAGTATCAACTGACTCCAATGGCAACGATCATAGAGGTTTCAACCGTACGGGAAGCCTTCGAGA TAATCGAGGAGGCCCACGAGCTCATGTTCAAGCTCGGCGCCGAGAGGGTTTCAACGACTGTAAGACTCGACGACAGACGC GATAAGGCTGTCCACATGGAGGACAAGGTCAAATCAGTCCTCGAAAAGGTGAGGGGTGGTTGA
Upstream 100 bases:
>100_bases TGTACATTCCATCACCCTCAACTATCTATGGGTGAATGGTTATTTATCTTTCCCGCAAAGTTTAAAAAATTGCCGAACTA AACTTAGCCAGGTGTCGAAG
Downstream 100 bases:
>100_bases GATTAGGGCCCTGGTTCTGGCCATAGACCGCGATGACGATTTCGGCCAGAAGGCCGGCGTTGAAGGTCCCGTTATAGGGA GAGATGCCTGTATAGATGCC
Product: protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MVIVEFVIVPLGEKSLSRYVAEVVKLLEKKGVKYQLTPMATIIEVSTVREAFEIIEEAHELMFKLGAERVSTTVRLDDRR DKAVHMEDKVKSVLEKVRGG
Sequences:
>Translated_100_residues MVIVEFVIVPLGEKSLSRYVAEVVKLLEKKGVKYQLTPMATIIEVSTVREAFEIIEEAHELMFKLGAERVSTTVRLDDRR DKAVHMEDKVKSVLEKVRGG >Mature_100_residues MVIVEFVIVPLGEKSLSRYVAEVVKLLEKKGVKYQLTPMATIIEVSTVREAFEIIEEAHELMFKLGAERVSTTVRLDDRR DKAVHMEDKVKSVLEKVRGG
Specific function: Unknown
COG id: COG0011
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0045 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002767 - InterPro: IPR016198 [H]
Pfam domain/function: PF01910 DUF77 [H]
EC number: NA
Molecular weight: Translated: 11358; Mature: 11358
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIVEFVIVPLGEKSLSRYVAEVVKLLEKKGVKYQLTPMATIIEVSTVREAFEIIEEAHE CEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH LMFKLGAERVSTTVRLDDRRDKAVHMEDKVKSVLEKVRGG HHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MVIVEFVIVPLGEKSLSRYVAEVVKLLEKKGVKYQLTPMATIIEVSTVREAFEIIEEAHE CEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH LMFKLGAERVSTTVRLDDRRDKAVHMEDKVKSVLEKVRGG HHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7592379 [H]