| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212225116
Identifier: 212225116
GI number: 212225116
Start: 1843369
End: 1844502
Strand: Reverse
Name: 212225116
Synonym: TON_1963
Alternate gene names: NA
Gene position: 1844502-1843369 (Counterclockwise)
Preceding gene: 212225117
Following gene: 212225115
Centisome position: 99.83
GC content: 51.59
Gene sequence:
>1134_bases GTGGTTGAGATTAGGGCCCTGGTTCTGGCCATAGACCGCGATGACGATTTCGGCCAGAAGGCCGGCGTTGAAGGTCCCGT TATAGGGAGAGATGCCTGTATAGATGCCGCTTTAAAGCTCAGTCTGGCCGACCCCGAGGACAGCGATGCCAACGTTGTTT ATGCGGCCGTCAAGCTCTACGATGAGCTGAAAGGGAGCGGGGAGTTCGATGAGGTGGAGGTTGCACTCATAACAGGCCAC CCAAAGGTTGGCGTCAAGAGCGACCTCGAGCTGAGCAGGCAGCTCGACGAGGTTCTCCAGAGGTTCCCTGCCGATGGGGT TATCACAGTAACGGATGGCGCTGAGGACGAGCAGATATTCCCAATCATCACATCAAAGGTGTCCATAATAAGCTCTCACC GAGTTGTCGTGAAGCAGAGCGAGGGCATAGAGACAACATATTACATCATATACCGCTATTTAAGGGAGATACTGAGTGAT CCTGAGGTGGCAAAGGTAGTCCTCGGTATACCGGGCATGATACTCCTGCTTTACGGCATAGCAAGGCTCATAGGTGTTTG GTATCCTGAGAGCGTCAAAATAGTCTCCGCCACGATAACGGGCACAATACTGCTCTTCATTGGAGGCTACTTCTTCACCA AGGGATTCCGCTTCAACTTCAGGGAGACCCTCGCGAAGCAGTTCATATTCGTCATCTCCATCGTGGCGGGTCTGCTCATC ATAAGCGGGGGTGCCATAAACGCCTACCTGAGCCTTGAGGAGTACTCTAAGGAGCTCATAGGCGGCTGGCCTGGTACACC ACTTCTAGCGACGCTCATTTACATAAACGCCCTGAGCTCGTCCCTAACACTTGGAATATCCGTTATGATAATGGGTAAAA TTGTCCAGGCGTACCTGAGGAAGGACCACCACATCTGGTACTATATATCCACTCTCCTCATAATGCCCGCCCTCTGGGTA ACAATAGACCTAACGACGAGGTATGCGATGGCCATACTGACGATTTCAGATATAGAGGTTTTCACCAAGTTACTGCTGGC CTTTGTGGACGTCGCCATAGCGGTTCTTGTTGGAATATACCTGAGAGGAAAAGTTAGGGGATGGGAGAGAATTGAAGCTG GAACAGGCACTTGA
Upstream 100 bases:
>100_bases GGCGCCGAGAGGGTTTCAACGACTGTAAGACTCGACGACAGACGCGATAAGGCTGTCCACATGGAGGACAAGGTCAAATC AGTCCTCGAAAAGGTGAGGG
Downstream 100 bases:
>100_bases AGAGTATGAGAAGAGAAGGAAAAAGGCCGAGAAAGAGGCAGAAAAAGTTAGGAAGAAGTACAACAAGCGCCTTGAGAAGA AGGTCAAAGACATTCTGAAA
Product: membrane protein, conserved
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MVEIRALVLAIDRDDDFGQKAGVEGPVIGRDACIDAALKLSLADPEDSDANVVYAAVKLYDELKGSGEFDEVEVALITGH PKVGVKSDLELSRQLDEVLQRFPADGVITVTDGAEDEQIFPIITSKVSIISSHRVVVKQSEGIETTYYIIYRYLREILSD PEVAKVVLGIPGMILLLYGIARLIGVWYPESVKIVSATITGTILLFIGGYFFTKGFRFNFRETLAKQFIFVISIVAGLLI ISGGAINAYLSLEEYSKELIGGWPGTPLLATLIYINALSSSLTLGISVMIMGKIVQAYLRKDHHIWYYISTLLIMPALWV TIDLTTRYAMAILTISDIEVFTKLLLAFVDVAIAVLVGIYLRGKVRGWERIEAGTGT
Sequences:
>Translated_377_residues MVEIRALVLAIDRDDDFGQKAGVEGPVIGRDACIDAALKLSLADPEDSDANVVYAAVKLYDELKGSGEFDEVEVALITGH PKVGVKSDLELSRQLDEVLQRFPADGVITVTDGAEDEQIFPIITSKVSIISSHRVVVKQSEGIETTYYIIYRYLREILSD PEVAKVVLGIPGMILLLYGIARLIGVWYPESVKIVSATITGTILLFIGGYFFTKGFRFNFRETLAKQFIFVISIVAGLLI ISGGAINAYLSLEEYSKELIGGWPGTPLLATLIYINALSSSLTLGISVMIMGKIVQAYLRKDHHIWYYISTLLIMPALWV TIDLTTRYAMAILTISDIEVFTKLLLAFVDVAIAVLVGIYLRGKVRGWERIEAGTGT >Mature_377_residues MVEIRALVLAIDRDDDFGQKAGVEGPVIGRDACIDAALKLSLADPEDSDANVVYAAVKLYDELKGSGEFDEVEVALITGH PKVGVKSDLELSRQLDEVLQRFPADGVITVTDGAEDEQIFPIITSKVSIISSHRVVVKQSEGIETTYYIIYRYLREILSD PEVAKVVLGIPGMILLLYGIARLIGVWYPESVKIVSATITGTILLFIGGYFFTKGFRFNFRETLAKQFIFVISIVAGLLI ISGGAINAYLSLEEYSKELIGGWPGTPLLATLIYINALSSSLTLGISVMIMGKIVQAYLRKDHHIWYYISTLLIMPALWV TIDLTTRYAMAILTISDIEVFTKLLLAFVDVAIAVLVGIYLRGKVRGWERIEAGTGT
Specific function: Unknown
COG id: COG2237
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1032 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007254 [H]
Pfam domain/function: PF04123 DUF373 [H]
EC number: NA
Molecular weight: Translated: 41435; Mature: 41435
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEIRALVLAIDRDDDFGQKAGVEGPVIGRDACIDAALKLSLADPEDSDANVVYAAVKLY CEEEEEEEEEEECCCCCCHHCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCEEHHHHHHH DELKGSGEFDEVEVALITGHPKVGVKSDLELSRQLDEVLQRFPADGVITVTDGAEDEQIF HHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEE PIITSKVSIISSHRVVVKQSEGIETTYYIIYRYLREILSDPEVAKVVLGIPGMILLLYGI HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHH ARLIGVWYPESVKIVSATITGTILLFIGGYFFTKGFRFNFRETLAKQFIFVISIVAGLLI HHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH ISGGAINAYLSLEEYSKELIGGWPGTPLLATLIYINALSSSLTLGISVMIMGKIVQAYLR HCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDHHIWYYISTLLIMPALWVTIDLTTRYAMAILTISDIEVFTKLLLAFVDVAIAVLVGIY CCCCHHHHHHHHHHHHHHHHEEEHHHHHEEHHEEHHHHHHHHHHHHHHHHHHHHHHHHHH LRGKVRGWERIEAGTGT HHCCCCCCHHCCCCCCC >Mature Secondary Structure MVEIRALVLAIDRDDDFGQKAGVEGPVIGRDACIDAALKLSLADPEDSDANVVYAAVKLY CEEEEEEEEEEECCCCCCHHCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCEEHHHHHHH DELKGSGEFDEVEVALITGHPKVGVKSDLELSRQLDEVLQRFPADGVITVTDGAEDEQIF HHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEE PIITSKVSIISSHRVVVKQSEGIETTYYIIYRYLREILSDPEVAKVVLGIPGMILLLYGI HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHH ARLIGVWYPESVKIVSATITGTILLFIGGYFFTKGFRFNFRETLAKQFIFVISIVAGLLI HHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH ISGGAINAYLSLEEYSKELIGGWPGTPLLATLIYINALSSSLTLGISVMIMGKIVQAYLR HCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDHHIWYYISTLLIMPALWVTIDLTTRYAMAILTISDIEVFTKLLLAFVDVAIAVLVGIY CCCCHHHHHHHHHHHHHHHHEEEHHHHHEEHHEEHHHHHHHHHHHHHHHHHHHHHHHHHH LRGKVRGWERIEAGTGT HHCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]