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The map label for this gene is 212225114

Identifier: 212225114

GI number: 212225114

Start: 1841442

End: 1842287

Strand: Reverse

Name: 212225114

Synonym: TON_1961

Alternate gene names: NA

Gene position: 1842287-1841442 (Counterclockwise)

Preceding gene: 212225115

Following gene: 212225112

Centisome position: 99.71

GC content: 51.06

Gene sequence:

>846_bases
ATGTTAAAGGTCGACAGGCTGCGCTTTGGAACGGCTGGAATCCCGCTCTCAACGCCGAAGCGCTCAACAATAAACGGCAT
AATCCATGTGAGAAGCCTTGGACTTGATGCCATGGAGCTTGAATTCGTCCGCGGGGTCAACCTCAAGCCCGAGCTGGCAA
AGAAGATTAAATACGTCGCTAAAAAACACGATGTTCTCTTAACAGCCCACGCACCCTACTATATCAACCTTAACGCGAGC
GAGAAGGCCAAGGTTGAGGCCAGCAAGAAGCGCATCATCCAGAGTGCCGAGAGGCTCCACGACGCTGGTGGCTGGAGTGT
CGTCTTCCATGCAGGTTACTACCTAAGGCAGCCGCCAGAGAGGGTCTACGAGCGCATAAAGAACGAGCTTAAGGATATCG
AACGGGAGCTGGTAGATAGAGGCATTAAAGTATGGCTAAGACCAGAGCTCACAGGGAAACCAACGCAGTTTGGGGATTTG
AAGGAGATAGTGAAGCTCAGCGAGGAACTAGAGACAGTCCTTCCAACCATAGACTTTGCCCACGCCCACGCAAGACACAT
CGGAAAGTGTAACACAACCGAAGAATGGCGCGAGATGCTGAGTTTCATAGAAGATCGTCTCGGCAGAGAAGCTCTGGACA
ACATGCACATTCACATGAGCGGCATAAACTACGGGCCAAAGGGCGAGAAGAACCACCTACCGCTCCAGGAGAGCGACATG
AGGTGGGAGGATCTGCTCAAAGTCCTCAAGGAGTTCAAAGTCAAGGGCGTCGTCATAAGCGAGAGTCCGAATATCGAAGA
GGATGCAATCCTTATGAAGAAAAAGTACGAGGAAATCAAGATTTAG

Upstream 100 bases:

>100_bases
GCTGAACAAGAGCCTCAGGAAGCTGGAGGAAATCTTGGGAGAGAAAATAGAACGGTAGCCTTATAAGTTAGGTTTCCCTA
ATTCTCTTTGGGTGGTGAGG

Downstream 100 bases:

>100_bases
TCATTTCAAGCCTTCTGTATCTTTCCATTATCTCAATGAGCTCTTCCTTTGGCAGTGAGTACCTCACGTGGCCGTTTCTT
CCCTTCGTTGTTTTCGCCTG

Product: endonuclease IV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MLKVDRLRFGTAGIPLSTPKRSTINGIIHVRSLGLDAMELEFVRGVNLKPELAKKIKYVAKKHDVLLTAHAPYYINLNAS
EKAKVEASKKRIIQSAERLHDAGGWSVVFHAGYYLRQPPERVYERIKNELKDIERELVDRGIKVWLRPELTGKPTQFGDL
KEIVKLSEELETVLPTIDFAHAHARHIGKCNTTEEWREMLSFIEDRLGREALDNMHIHMSGINYGPKGEKNHLPLQESDM
RWEDLLKVLKEFKVKGVVISESPNIEEDAILMKKKYEEIKI

Sequences:

>Translated_281_residues
MLKVDRLRFGTAGIPLSTPKRSTINGIIHVRSLGLDAMELEFVRGVNLKPELAKKIKYVAKKHDVLLTAHAPYYINLNAS
EKAKVEASKKRIIQSAERLHDAGGWSVVFHAGYYLRQPPERVYERIKNELKDIERELVDRGIKVWLRPELTGKPTQFGDL
KEIVKLSEELETVLPTIDFAHAHARHIGKCNTTEEWREMLSFIEDRLGREALDNMHIHMSGINYGPKGEKNHLPLQESDM
RWEDLLKVLKEFKVKGVVISESPNIEEDAILMKKKYEEIKI
>Mature_281_residues
MLKVDRLRFGTAGIPLSTPKRSTINGIIHVRSLGLDAMELEFVRGVNLKPELAKKIKYVAKKHDVLLTAHAPYYINLNAS
EKAKVEASKKRIIQSAERLHDAGGWSVVFHAGYYLRQPPERVYERIKNELKDIERELVDRGIKVWLRPELTGKPTQFGDL
KEIVKLSEELETVLPTIDFAHAHARHIGKCNTTEEWREMLSFIEDRLGREALDNMHIHMSGINYGPKGEKNHLPLQESDM
RWEDLLKVLKEFKVKGVVISESPNIEEDAILMKKKYEEIKI

Specific function: Unknown

COG id: COG0648

COG function: function code L; Endonuclease IV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001719
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 32336; Mature: 32336

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKVDRLRFGTAGIPLSTPKRSTINGIIHVRSLGLDAMELEFVRGVNLKPELAKKIKYVA
CCCCCCEECCCCCCCCCCCCCHHHHHEEEEHHCCCCHHHHHHHHCCCCCHHHHHHHHHHH
KKHDVLLTAHAPYYINLNASEKAKVEASKKRIIQSAERLHDAGGWSVVFHAGYYLRQPPE
HHCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCHH
RVYERIKNELKDIERELVDRGIKVWLRPELTGKPTQFGDLKEIVKLSEELETVLPTIDFA
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH
HAHARHIGKCNTTEEWREMLSFIEDRLGREALDNMHIHMSGINYGPKGEKNHLPLQESDM
HHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCC
RWEDLLKVLKEFKVKGVVISESPNIEEDAILMKKKYEEIKI
CHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKVDRLRFGTAGIPLSTPKRSTINGIIHVRSLGLDAMELEFVRGVNLKPELAKKIKYVA
CCCCCCEECCCCCCCCCCCCCHHHHHEEEEHHCCCCHHHHHHHHCCCCCHHHHHHHHHHH
KKHDVLLTAHAPYYINLNASEKAKVEASKKRIIQSAERLHDAGGWSVVFHAGYYLRQPPE
HHCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCHH
RVYERIKNELKDIERELVDRGIKVWLRPELTGKPTQFGDLKEIVKLSEELETVLPTIDFA
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH
HAHARHIGKCNTTEEWREMLSFIEDRLGREALDNMHIHMSGINYGPKGEKNHLPLQESDM
HHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCC
RWEDLLKVLKEFKVKGVVISESPNIEEDAILMKKKYEEIKI
CHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]